RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SH3TC2Q8TF17 1288 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 PHF21BQ96EK2 531 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 TNIP3Q96KP6 325 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 ABHD16BQ9H3Z7 469 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 TLK1Q9UKI8 766 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 STAP1Q9ULZ2 295 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 ADAMTS5Q9UNA0 930 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 ST3GAL5Q9UNP4 418 aa13.7□□□□□ -0.22
COL6A2-204ENST00000409416 HBS1LQ9Y450 684 aaKnown RBP13.7□□□□□ -0.22
COL6A2-204ENST00000409416 C17orf102A2RUQ5 167 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 VAPBO95292 243 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 PYGLP06737 847 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 ENO3P13929 434 aaPredicted RBP13.69□□□□□ -0.22
COL6A2-204ENST00000409416 PTPN1P18031 435 aaKnown RBP13.69□□□□□ -0.22
COL6A2-204ENST00000409416 BCAT1P54687 386 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 HIC1Q14526 733 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 EBNA1BP2Q99848 306 aaKnown RBP13.69□□□□□ -0.22
COL6A2-204ENST00000409416 OXCT2Q9BYC2 517 aaPredicted RBP13.69□□□□□ -0.22
COL6A2-204ENST00000409416 TSPYL2Q9H2G4 693 aaPredicted RBP13.69□□□□□ -0.22
COL6A2-204ENST00000409416 WDR55Q9H6Y2 383 aaPredicted RBP13.69□□□□□ -0.22
COL6A2-204ENST00000409416 KCNK4Q9NYG8 393 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 DTLQ9NZJ0 730 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 BFARQ9NZS9 450 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 GJD2Q9UKL4 321 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 VANGL2Q9ULK5 521 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 LRCH1Q9Y2L9 728 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 A0A0U1RQS6 177 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 ATP6AP2A0A1C7CYW4 349 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 SMAPO00193 183 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 DCXO43602 365 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 ATP6AP2O75787 350 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 PSEN2P49810 448 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 AP2B1P63010 937 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 PDK2Q15119 407 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 BTBD8Q5XKL5 378 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 ARHGAP17Q68EM7 881 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 CDCA2Q69YH5 1023 aaPredicted RBP13.69□□□□□ -0.22
COL6A2-204ENST00000409416 CCNJLQ8IV13 435 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 FAM193BQ96PV7 902 aaPredicted RBP13.69□□□□□ -0.22
COL6A2-204ENST00000409416 PIGVQ9NUD9 493 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 ITGA11Q9UKX5 1188 aa13.69□□□□□ -0.22
COL6A2-204ENST00000409416 NCF1BA6NI72 391 aaPredicted RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 NCF1CA8MVU1 366 aaPredicted RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 TRAFD1O14545 582 aaPredicted RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 PROCP04070 461 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 PRKCGP05129 697 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 BPGMP07738 259 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 NCF1P14598 390 aaPredicted RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 ACADSP16219 412 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 NFKB1P19838 968 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 IL4RP24394 825 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 SLC1A6P48664 564 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 LILRA4P59901 499 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 MCCD1P59942 119 aaPredicted RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 ARHGAP36Q6ZRI8 547 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 DCBLD1Q8N8Z6 715 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 TMA16Q96EY4 203 aaKnown RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 PPM1HQ9ULR3 514 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 NME7Q9Y5B8 376 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 COL11A1P12107 1806 aaPredicted RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 URB1O60287 2271 aaKnown RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 UBA6A0AVT1 1052 aaPredicted RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 TRPA1O75762 1119 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 GSTA2P09210 222 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 IRF9Q00978 393 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 EFEMP1Q12805 493 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 C10orf107Q8IVU9 208 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 KBTBD2Q8IY47 623 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 PANX3Q96QZ0 392 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 PIF1Q9H611 641 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 FLRT1Q9NZU1 646 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 FETUBQ9UGM5 382 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 SLC7A8Q9UHI5 535 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 C2CD2Q9Y426 696 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 UNC80Q8N2C7 3258 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 DHRS4L1P0CG22 281 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 CPB1P15086 417 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 ANPEPP15144 967 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 ARSAP15289 507 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 HOXA11P31270 313 aaPredicted RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 NSUN2Q08J23 767 aaKnown RBP eCLIP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 FSCN1Q16658 493 aaKnown RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 LCLAT1Q6UWP7 414 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 ZNF184Q99676 751 aaPredicted RBP13.68□□□□□ -0.22
COL6A2-204ENST00000409416 ADAM2Q99965 735 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 SPC25Q9HBM1 224 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 XPNPEP3Q9NQH7 507 aa13.68□□□□□ -0.22
COL6A2-204ENST00000409416 ZBTB24O43167 697 aaPredicted RBP13.67□□□□□ -0.22
COL6A2-204ENST00000409416 THP07101 528 aa13.67□□□□□ -0.22
COL6A2-204ENST00000409416 GRK4P32298 578 aa13.67□□□□□ -0.22
COL6A2-204ENST00000409416 SEMG2Q02383 582 aa13.67□□□□□ -0.22
COL6A2-204ENST00000409416 ASPHQ12797 758 aa13.67□□□□□ -0.22
COL6A2-204ENST00000409416 LPCAT4Q643R3 524 aa13.67□□□□□ -0.22
COL6A2-204ENST00000409416 EXOC8Q8IYI6 725 aa13.67□□□□□ -0.22
COL6A2-204ENST00000409416 GIPC2Q8TF65 315 aa13.67□□□□□ -0.22
COL6A2-204ENST00000409416 OR12D3Q9UGF7 316 aa13.67□□□□□ -0.22
COL6A2-204ENST00000409416 TGDSO95455 350 aa13.67□□□□□ -0.22
COL6A2-204ENST00000409416 VAV1P15498 845 aa13.67□□□□□ -0.22
COL6A2-204ENST00000409416 GPR15P49685 360 aa13.67□□□□□ -0.22
COL6A2-204ENST00000409416 PKNOX1P55347 436 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms