RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ZBTB17Q13105 803 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 TIGD5Q53EQ6 642 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 PPM1JQ5JR12 505 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 AGMOQ6ZNB7 445 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 TMEM135Q86UB9 458 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 GPATCH11Q8N954 259 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 PIWIL2Q8TC59 973 aaKnown RBP17.22■□□□□ 0.35
NUP50-203ENST00000407019 SOCS4Q8WXH5 440 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 ISL2Q96A47 359 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 PGLYRP2Q96PD5 576 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 VAT1Q99536 393 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 MLPHQ9BV36 600 aaPredicted RBP17.22■□□□□ 0.35
NUP50-203ENST00000407019 SENP6Q9GZR1 1112 aaPredicted RBP17.22■□□□□ 0.35
NUP50-203ENST00000407019 OR12D3Q9UGF7 316 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 TAGLN3Q9UI15 199 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 B2RBV5 119 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 IGHA2P01877 340 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 PRKCGP05129 697 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 SERPINA6P08185 405 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 ODC1P11926 461 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 NFKB1P19838 968 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 SPRP35270 261 aaPredicted RBP17.22■□□□□ 0.35
NUP50-203ENST00000407019 MAGEA12P43365 314 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 ALDH18A1P54886 795 aaKnown RBP17.22■□□□□ 0.35
NUP50-203ENST00000407019 RCN2Q14257 317 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 GPR162Q16538 588 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 UPP1Q16831 310 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 TAC4Q86UU9 113 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 C10orf107Q8IVU9 208 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 DCLK2Q8N568 766 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 CFAP61Q8NHU2 1237 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 CCDC106Q9BWC9 280 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 STN1Q9H668 368 aaKnown RBP17.22■□□□□ 0.35
NUP50-203ENST00000407019 TMEM216Q9P0N5 145 aa17.22■□□□□ 0.35
NUP50-203ENST00000407019 ZCWPW2A0A1B0GU75 182 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 SPECC1L-ADORA2AF8WAN1 911 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 DUSP11O75319 330 aaKnown RBP17.21■□□□□ 0.35
NUP50-203ENST00000407019 LRIG2O94898 1065 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 GRK2P25098 689 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 PGM1P36871 562 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 LIMK2P53671 638 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 KPNB1Q14974 876 aaKnown RBP17.21■□□□□ 0.35
NUP50-203ENST00000407019 TAF11Q15544 211 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 ANKRD20A4Q4UJ75 823 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 KHDC1Q4VXA5 237 aaKnown RBP17.21■□□□□ 0.35
NUP50-203ENST00000407019 GDF6Q6KF10 455 aaPredicted RBP17.21■□□□□ 0.35
NUP50-203ENST00000407019 STRA8Q7Z7C7 330 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 TMPRSS6Q8IU80 811 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.21■□□□□ 0.35
NUP50-203ENST00000407019 PPP4R1Q8TF05 950 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 ZNF778Q96MU6 729 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 RTP3Q9BQQ7 232 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 EBF4Q9BQW3 602 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 PAAF1Q9BRP4 392 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 CXorf56Q9H5V9 222 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 COPG2Q9UBF2 871 aa17.21■□□□□ 0.35
NUP50-203ENST00000407019 ARHGAP42A6NI28 874 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 CHRNA1P02708 482 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 NPY2RP49146 381 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 CCDC153Q494R4 210 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 GNASQ5JWF2 1037 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 PM20D1Q6GTS8 502 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 C17orf99Q6UX52 265 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 CMC1Q7Z7K0 106 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 METTL23Q86XA0 190 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 FAM96AQ9H5X1 160 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 SORCS3Q9UPU3 1222 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 MAGEB16A2A368 324 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 GPR182O15218 404 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 ATP9BO43861 1147 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 MAGEC1O60732 1142 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 HUNKP57058 714 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 PRPSAP1Q14558 356 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 CERCAMQ5T4B2 595 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 DCLRE1AQ6PJP8 1040 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 CXCL17Q6UXB2 119 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 MAB21L3Q8N8X9 362 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 RNF34Q969K3 372 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 ATXN7L3BQ96GX2 97 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 TEKT5Q96M29 485 aa17.2■□□□□ 0.34
NUP50-203ENST00000407019 TNPO2O14787 897 aaKnown RBP17.19■□□□□ 0.34
NUP50-203ENST00000407019 CPA3P15088 417 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 BDNFP23560 247 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 PTDSS1P48651 473 aaKnown RBP17.19■□□□□ 0.34
NUP50-203ENST00000407019 COG7P83436 770 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 ACSBG2Q5FVE4 666 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 FSTL4Q6MZW2 842 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 FAM171BQ6P995 826 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 MRPL10Q7Z7H8 261 aaKnown RBP17.19■□□□□ 0.34
NUP50-203ENST00000407019 SCML4Q8N228 414 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 MFSD3Q96ES6 412 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 AGAP2Q99490 1192 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 ACBD6Q9BR61 282 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 IL22Q9GZX6 179 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 DMAP1Q9NPF5 467 aaPredicted RBP17.19■□□□□ 0.34
NUP50-203ENST00000407019 MANSC4A6NHS7 340 aaPredicted RBP17.19■□□□□ 0.34
NUP50-203ENST00000407019 PRR5-ARHGAP8B1AHC4 643 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 AP3B1O00203 1094 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 MPOP05164 745 aa17.19■□□□□ 0.34
NUP50-203ENST00000407019 RALBP11234 206 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms