RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 RDH11Q8TC12 318 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 SPATA17Q96L03 361 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 MID1IP1Q9NPA3 183 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 PXMP2Q9NR77 195 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 ARL8BQ9NVJ2 186 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 LIMD1Q9UGP4 676 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 TSPAN16Q9UKR8 245 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 DPPA5A6NC42 116 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 KRT87PA6NCN2 255 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 HOXA2O43364 376 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 TM7SF2O76062 418 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 MT-CO1P00395 513 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 MLNP12872 115 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 CCNA2P20248 432 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 THPOP40225 353 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 FMO1Q01740 532 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 POLR1BQ9H9Y6 1135 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 S100A14Q9HCY8 104 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 C8orf4Q9NR00 106 aa17.52■□□□□ 0.39
SIN3A-203ENST00000394949 C5orf60A6NFR6 353 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 SNRPB2P08579 225 aaKnown RBP17.51■□□□□ 0.39
SIN3A-203ENST00000394949 CDH3P22223 829 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 CASP5P51878 434 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 DPYSQ14117 519 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 HGSNATQ68CP4 663 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 PHF13Q86YI8 300 aaPredicted RBP17.51■□□□□ 0.39
SIN3A-203ENST00000394949 POP5Q969H6 163 aaKnown RBP17.51■□□□□ 0.39
SIN3A-203ENST00000394949 KLK14Q9P0G3 267 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 RAP2CQ9Y3L5 183 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 MTF2Q9Y483 593 aaPredicted RBP17.51■□□□□ 0.39
SIN3A-203ENST00000394949 NCF1BA6NI72 391 aaPredicted RBP17.51■□□□□ 0.39
SIN3A-203ENST00000394949 NCF1CA8MVU1 366 aaPredicted RBP17.51■□□□□ 0.39
SIN3A-203ENST00000394949 KRT6AP02538 564 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 KRT6BP04259 564 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 NCF1P14598 390 aaPredicted RBP17.51■□□□□ 0.39
SIN3A-203ENST00000394949 KRT6CP48668 564 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 PCDH20Q8N6Y1 951 aaKnown RBP17.51■□□□□ 0.39
SIN3A-203ENST00000394949 AMER2Q8N7J2 671 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 OR56A4Q8NGH8 313 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 DEPDC7Q96QD5 511 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 TCF12Q99081 682 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 POMKQ9H5K3 350 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 FBXO6Q9NRD1 293 aaPredicted RBP17.51■□□□□ 0.39
SIN3A-203ENST00000394949 BTBD3Q9Y2F9 522 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 PTGES3LE9PB15 166 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 ENKURQ8TC29 256 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 GIPC3Q8TF64 312 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 ROGDIQ9GZN7 287 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 CYP3A7-CYP3A51PA0A087WV96 503 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 CENPXA8MT69 81 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 H3BNX3 289 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 LYNP07948 512 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 CYP3A7P24462 503 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 ARMC3Q5W041 872 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 RTKNQ9BST9 563 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 SH3GLB1Q9Y371 365 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 SQORQ9Y6N5 450 aa17.51■□□□□ 0.39
SIN3A-203ENST00000394949 H7C4K7 107 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 DDX3YO15523 660 aaKnown RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 NAA20P61599 178 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 TMEM132BQ14DG7 1078 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 TAF5Q15542 800 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 LZTR1Q8N653 840 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 FNDC5Q8NAU1 212 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 FAM163AQ96GL9 167 aaPredicted RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 RPRD1AQ96P16 312 aaPredicted RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 ASB7Q9H672 318 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 DHX33Q9H6R0 707 aaKnown RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 SSU72Q9NP77 194 aaKnown RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 DUSP12Q9UNI6 340 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 A0A0A0MRY4 1105 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 NKRFO15226 690 aaKnown RBP eCLIP17.5■□□□□ 0.394e-7■□□□□ 9.1
SIN3A-203ENST00000394949 RECQL5O94762 991 aaPredicted RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 MICAL2O94851 1124 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 ZNF177Q13360 481 aaPredicted RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 POU6F1Q14863 301 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 PIGWQ7Z7B1 504 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 KAT5Q92993 513 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 SPATA13Q96N96 652 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 MTFR1LQ9H019 292 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 CLPBQ9H078 707 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 LGALS13Q9UHV8 139 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 HBS1LQ9Y450 684 aaKnown RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 LBPP18428 481 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 ZNF846Q147U1 533 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 POLD3Q15054 466 aaPredicted RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 RNF220Q5VTB9 566 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 ZNF276Q8N554 614 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 IL22Q9GZX6 179 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 KRCC1Q9NPI7 259 aaPredicted RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 hCG_1818297A0A087WSY0 165 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 TAF4O00268 1085 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 KPNA6O60684 536 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 FESP07332 822 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 ETS2P15036 469 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 GRIA3P42263 894 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 CSE1LP55060 971 aaKnown RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 MTTPP55157 894 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms