RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 VANGL2Q9ULK5 521 aa14.67□□□□□ -0.06
NELFE-201ENST00000375425 FHOD1Q9Y613 1164 aa14.67□□□□□ -0.06
NELFE-201ENST00000375425 HS3ST4Q9Y661 456 aa14.67□□□□□ -0.06
NELFE-201ENST00000375425 MUC22E2RYF6 1773 aaPredicted RBP14.67□□□□□ -0.06
NELFE-201ENST00000375425 USP24Q9UPU5 2620 aa14.67□□□□□ -0.06
NELFE-201ENST00000375425 ITIH6Q6UXX5 1313 aa14.67□□□□□ -0.06
NELFE-201ENST00000375425 DMXL2Q8TDJ6 3036 aa14.67□□□□□ -0.06
NELFE-201ENST00000375425 DAB1O75553 588 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 RNASEH2AO75792 299 aaKnown RBP14.66□□□□□ -0.06
NELFE-201ENST00000375425 TRIM16O95361 564 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 ZNF883P0CG24 379 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 CYP11B1P15538 503 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 SULT2A1Q06520 285 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 TEAD4Q15561 434 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 TCP11X2Q5H9J9 407 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 CXorf57Q6NSI4 855 aaKnown RBP14.66□□□□□ -0.06
NELFE-201ENST00000375425 C14orf80Q86SX3 495 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 STK40Q8N2I9 435 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 CHCHD4Q8N4Q1 142 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 TMEM35BQ8NCS4 154 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 SETD7Q8WTS6 366 aaKnown RBP14.66□□□□□ -0.06
NELFE-201ENST00000375425 C18orf8Q96DM3 657 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 ORAI3Q9BRQ5 295 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 NAA15Q9BXJ9 866 aaKnown RBP14.66□□□□□ -0.06
NELFE-201ENST00000375425 TMEM121BQ9BXQ6 578 aaPredicted RBP14.66□□□□□ -0.06
NELFE-201ENST00000375425 SIK2Q9H0K1 926 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 WDCPQ9H6R7 721 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.66□□□□□ -0.06
NELFE-201ENST00000375425 KLK13Q9UKR3 277 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 ANKRD6Q9Y2G4 727 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 SNX11Q9Y5W9 270 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 KNL1Q8NG31 2342 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.66□□□□□ -0.06
NELFE-201ENST00000375425 KCNK3O14649 394 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 CBFA2T3O75081 653 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 PAGE1O75459 146 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 IGHV4-34P06331 123 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 UCHL3P15374 230 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 VAV1P15498 845 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 TFE3P19532 575 aaPredicted RBP14.66□□□□□ -0.06
NELFE-201ENST00000375425 CDH5P33151 784 aaPredicted RBP14.66□□□□□ -0.06
NELFE-201ENST00000375425 GGCXP38435 758 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 GRIA4P48058 902 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 PSMD8P48556 350 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 IRAK1P51617 712 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 OXCT1P55809 520 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 CENPCQ03188 943 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 MTA1Q13330 715 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 ZNF177Q13360 481 aaPredicted RBP14.66□□□□□ -0.06
NELFE-201ENST00000375425 ZNF423Q2M1K9 1284 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 CT47A1Q5JQC4 288 aaPredicted RBP14.66□□□□□ -0.06
NELFE-201ENST00000375425 TAF3Q5VWG9 929 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 KIAA0895LQ68EN5 471 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 NCEH1Q6PIU2 408 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 DBX2Q6ZNG2 339 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 ERICH1Q86X53 443 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 PNPLA1Q8N8W4 532 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 FRS2Q8WU20 508 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 GATA6Q92908 595 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 PPP1R9BQ96SB3 815 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 NPY6RQ99463 290 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 FEM1AQ9BSK4 669 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 STK33Q9BYT3 514 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 TKTL2Q9H0I9 626 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 PIGVQ9NUD9 493 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 RRN3Q9NYV6 651 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 ADAMTS1Q9UHI8 967 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 PCOLCE2Q9UKZ9 415 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 MSRB2Q9Y3D2 182 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 NEUROG3Q9Y4Z2 214 aa14.66□□□□□ -0.06
NELFE-201ENST00000375425 FAM170AA1A519 330 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 CLDN11O75508 207 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 ADCY5O95622 1261 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 ADH1BP00325 375 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 IL1BP01584 269 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 GOT1P17174 413 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 EEF1GP26641 437 aaKnown RBP14.65□□□□□ -0.06
NELFE-201ENST00000375425 GABRB2P47870 512 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 CXCR3P49682 368 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 ELAVL3Q14576 367 aaKnown RBP14.65□□□□□ -0.06
NELFE-201ENST00000375425 KCNT1Q5JUK3 1230 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 OTUD1Q5VV17 481 aaPredicted RBP14.65□□□□□ -0.06
NELFE-201ENST00000375425 LRSAM1Q6UWE0 723 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 LAYNQ6UX15 382 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 ADAT2Q7Z6V5 191 aaKnown RBP14.65□□□□□ -0.06
NELFE-201ENST00000375425 AADATQ8N5Z0 425 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 KDF1Q8NAX2 398 aaPredicted RBP14.65□□□□□ -0.06
NELFE-201ENST00000375425 OR52K2Q8NGK3 314 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 OR2T34Q8NGX1 318 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 NT5C3BQ969T7 300 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 ALG14Q96F25 216 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 EBF2Q9HAK2 575 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 ANLNQ9NQW6 1124 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 LMBRD1Q9NUN5 540 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 ARHGEF38Q9NXL2 777 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 ZMIZ1Q9ULJ6 1067 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 FZD4Q9ULV1 537 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 PCDHGB2Q9Y5G2 931 aa14.65□□□□□ -0.06
NELFE-201ENST00000375425 A0A1W2PPC4 97 aa14.64□□□□□ -0.07
NELFE-201ENST00000375425 LRRC72A6NJI9 287 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms