RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 MID1IP1Q9NPA3 183 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 EIF2B3Q9NR50 452 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SERINC1Q9NRX5 453 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SPTLC3Q9NUV7 552 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 TCFL5Q9UL49 500 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 EXOC7Q9UPT5 735 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 EMC9Q9Y3B6 208 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 PTPRSQ13332 1948 aa3.69□□□□□ -1.82
ECHDC1-205ENST00000368295 SALL1Q9NSC2 1324 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 TLN1Q9Y490 2541 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 A0A1B0GUL6 1792 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 CACNA1IQ9P0X4 2223 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 TMEM8BA6NDV4 472 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 ENO4A6NNW6 628 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 ARVCFO00192 962 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 EXOC3O60645 756 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 KINO60870 393 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 AFPP02771 609 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 DCNP07585 359 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 CD3EP07766 207 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 DLDP09622 509 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 CSH1P0DML2 217 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 CSH2P0DML3 217 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 DLATP10515 647 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 CYP2C9P11712 490 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 VAV1P15498 845 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 TSHRP16473 764 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 PTGS1P23219 599 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 TBXAS1P24557 533 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 HTR1BP28222 390 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 PRKAR1BP31321 381 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 THPOP40225 353 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 STAT5AP42229 794 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 IL12RB1P42701 662 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 CTSKP43235 329 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 GMFBP60983 142 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 HAND2P61296 217 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 TEKQ02763 1124 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 KRT17Q04695 432 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 GABPB1Q06547 395 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 LRMPQ12912 555 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 DUSP4Q13115 394 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 FRG1Q14331 258 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 RRP1BQ14684 758 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 KYNUQ16719 465 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 CTXN3Q4LDR2 81 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 COLEC12Q5KU26 742 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 MFSD14BQ5SR56 506 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 PM20D1Q6GTS8 502 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 TANGO2Q6ICL3 276 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 SLC23A3Q6PIS1 610 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 OLFML1Q6UWY5 402 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 DBX2Q6ZNG2 339 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 MTDHQ86UE4 582 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 SMRP1Q8NCR6 262 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 LRRN4CLQ8ND94 238 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 TRIM58Q8NG06 486 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 OR56B2PQ8NGI1 322 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 MDM1Q8TC05 714 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 SH3RF3Q8TEJ3 882 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 RNF139Q8WU17 664 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 AUTS2Q8WXX7 1259 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 ST8SIA4Q92187 359 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 JADE3Q92613 823 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 SGCDQ92629 289 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 MRGPRX3Q96LB0 322 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 KCNC2Q96PR1 638 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 UNKQ9C0B0 810 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 PARVGQ9HBI0 331 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 PNPLA8Q9NP80 782 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 CABP5Q9NP86 173 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 THG1LQ9NWX6 298 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 UBAP1Q9NZ09 502 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 IL1RAPL1Q9NZN1 696 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 SLAMF8Q9P0V8 285 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 STK39Q9UEW8 545 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 AGO2Q9UKV8 859 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 PCDHGB4Q9UN71 923 aa3.68□□□□□ -1.82
ECHDC1-205ENST00000368295 RNF103-CHMP3A0A140T963 221 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 POM121BA6NF01 834 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 GPR89AB7ZAQ6 455 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 RNF103O00237 685 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 NPC1O15118 1278 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 MAGEB3O15480 346 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 POLR2DO15514 142 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 B4GALT4O60513 344 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 BEST1O76090 585 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 PLGP00747 810 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 ITGAVP06756 1048 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 GPR89BP0CG08 455 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 ACTN1P12814 892 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 PDCP20941 246 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 NFKBIAP25963 317 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 AKT1P31749 480 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 ACAA2P42765 397 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 ABCG1P45844 678 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 GPR3P46089 330 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 SCAND1P57086 179 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 MC1RQ01726 317 aa3.67□□□□□ -1.82
ECHDC1-205ENST00000368295 UBE3AQ05086 875 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms