RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 IGLV3-10A0A075B6K4 115 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 WASH4PA8MWX3 477 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 E9PAM4 449 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 SMAPO00193 183 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 KCNN4O15554 427 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 COCHO43405 550 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 PPFIA2O75334 1257 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 MOCS2O96007 188 aaPredicted RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 F11P03951 625 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 C8AP07357 584 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 SRGAP2BP0DMP2 458 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 ETS1P14921 441 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 MX2P20592 715 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 RBL1P28749 1068 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 HNRNPH1P31943 449 aaKnown RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 RPL22P35268 128 aaKnown RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 CLCN4P51793 760 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 PRKD1Q15139 912 aaPredicted RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 PREPLQ4J6C6 727 aaPredicted RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 MS4A13Q5J8X5 152 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 IZUMO3Q5VZ72 239 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 TMEM150AQ86TG1 271 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 PRUNE1Q86TP1 453 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 TXLNGYQ9BZA5 131 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 NACA2Q9H009 215 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 PAK5Q9P286 719 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 XPO7Q9UIA9 1087 aaKnown RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 CDH22Q9UJ99 828 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 HPCAL4Q9UM19 191 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 SHOC2Q9UQ13 582 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 SNX10Q9Y5X0 201 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 DOCK4Q8N1I0 1966 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 C5orf60A6NFR6 353 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 GCATO75600 419 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 MAP3K6O95382 1288 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 GGCXP38435 758 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 ZNF33AQ06730 810 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 DHX9Q08211 1270 aaKnown RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 KCNC3Q14003 757 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 COL19A1Q14993 1142 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 RNASEH2BQ5TBB1 312 aaKnown RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 HEATR6Q6AI08 1181 aaKnown RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 RWDD4Q6NW29 188 aaKnown RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 LRRC31Q6UY01 552 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 CEP128Q6ZU80 1094 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 HOOK3Q86VS8 718 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 ZNF683Q8IZ20 524 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 ELMOD1Q8N336 334 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 NPWQ8N729 165 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 ATXN2LQ8WWM7 1075 aaKnown RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 HTR3CQ8WXA8 447 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 AZIN2Q96A70 460 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 PLD4Q96BZ4 506 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 IL21Q9HBE4 155 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 CPSF2Q9P2I0 782 aaKnown RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 MCM8Q9UJA3 840 aa12.39□□□□□ -0.43
USF1-203ENST00000368021 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
USF1-203ENST00000368021 NUP205Q92621 2012 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 OLFM2O95897 454 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 HARS2P49590 506 aaKnown RBP12.38□□□□□ -0.43
USF1-203ENST00000368021 PPIDQ08752 370 aaKnown RBP12.38□□□□□ -0.43
USF1-203ENST00000368021 GALNT2Q10471 571 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 AUHQ13825 339 aaKnown RBP12.38□□□□□ -0.43
USF1-203ENST00000368021 ALS2CLQ60I27 953 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 TMC5Q6UXY8 1006 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 PPIL6Q8IXY8 311 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 RTL3Q8N8U3 475 aaKnown RBP12.38□□□□□ -0.43
USF1-203ENST00000368021 SLC22A17Q8WUG5 538 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 HDAC11Q96DB2 347 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 ASB2Q96Q27 587 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 LGMNQ99538 433 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 PRMT1Q99873 361 aaKnown RBP12.38□□□□□ -0.43
USF1-203ENST00000368021 LRRC3Q9BY71 257 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 KLC2Q9H0B6 622 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 RETREG1Q9H6L5 497 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 ZNF334Q9HCZ1 680 aaPredicted RBP12.38□□□□□ -0.43
USF1-203ENST00000368021 OBSL1O75147 1896 aa12.38□□□□□ -0.43
USF1-203ENST00000368021 DENND4CQ5VZ89 1909 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 MTSS1O43312 755 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 RHOQP17081 205 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 PFKLP17858 780 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 HOXA9P31269 272 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 GARSP41250 739 aaKnown RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 AAK1Q2M2I8 961 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 PTCRAQ6ISU1 281 aaPredicted RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 ANKRD54Q6NXT1 300 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 SYCE2Q6PIF2 218 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 YTHDF3Q7Z739 585 aaKnown RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 C14orf80Q86SX3 495 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 NLRP14Q86W24 1093 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 TMC8Q8IU68 726 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 RELL1Q8IUW5 271 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 LRRC49Q8IUZ0 686 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 APLFQ8IW19 511 aaPredicted RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 ZCCHC9Q8N567 271 aaKnown RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 TSEN2Q8NCE0 465 aaKnown RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 CPT1BQ92523 772 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 MSLNLQ96KJ4 702 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 PHACTR1Q9C0D0 580 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 ZYG11BQ9C0D3 744 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms