RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PFDN2Q9UHV9 154 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 DRG1Q9Y295 367 aaKnown RBP16.68■□□□□ 0.26
PTCH1-201ENST00000331920 PRMT3O60678 531 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 SCN2BO60939 215 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 EGFRP00533 1210 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 USP46P62068 366 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 CBWD6Q4V339 395 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 ACAD10Q6JQN1 1059 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 CES3Q6UWW8 571 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 SLC38A2Q96QD8 506 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 NIF3L1Q9GZT8 377 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 OSBPL5Q9H0X9 879 aaPredicted RBP16.68■□□□□ 0.26
PTCH1-201ENST00000331920 POMKQ9H5K3 350 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 CD209Q9NNX6 404 aa16.68■□□□□ 0.26
PTCH1-201ENST00000331920 BTN3A1O00481 513 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 OR1E1P30953 314 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 PRR5LQ6MZQ0 368 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 SHC4Q6S5L8 630 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 ATG9AQ7Z3C6 839 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 COLGALT1Q8NBJ5 622 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 CCDC59Q9P031 241 aaKnown RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 GPSM3Q9Y4H4 160 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 BPNT1O95861 308 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 HNF4AP41235 474 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 METTL6Q8TCB7 284 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 PSMD13Q9UNM6 376 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 OR56A5P0C7T3 313 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 STAG3L1P0CL83 205 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 CDC25CP30307 473 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 GCLCP48506 637 aaPredicted RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 GALK1P51570 392 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 STK4Q13043 487 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 ACAP2Q15057 778 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 RGS21Q2M5E4 152 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 ERO1BQ86YB8 467 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 PAFAH2Q99487 392 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 TLR8Q9NR97 1041 aaKnown RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 A0A0B4J269 797 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 H7C1W4 665 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 LSM1O15116 133 aaKnown RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 TUBB3Q13509 450 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 MYBPC3Q14896 1274 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 PSMD5Q16401 504 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 INO80DQ53TQ3 878 aaPredicted RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 USP38Q8NB14 1042 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 BHLHE22Q8NFJ8 381 aaPredicted RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 ZFRQ96KR1 1074 aaKnown RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 PARK7Q99497 189 aaKnown RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 KIAA0391O15091 583 aaKnown RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 FAM86B2P0C5J1 330 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 SP100P23497 879 aaPredicted RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 THOC7Q6I9Y2 204 aaKnown RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 ACTRT2Q8TDY3 377 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 CASKIN2Q8WXE0 1202 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 NKD1Q969G9 470 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 KCNN2Q9H2S1 579 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 A0A088AWK7 358 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 ZNF10P21506 573 aaPredicted RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 ZNF483Q8TF39 744 aaPredicted RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 RFT1Q96AA3 541 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 PCDH12Q9NPG4 1184 aa16.67■□□□□ 0.26
PTCH1-201ENST00000331920 DCP1AQ9NPI6 582 aaPredicted RBP16.67■□□□□ 0.26
PTCH1-201ENST00000331920 IGSF9BQ9UPX0 1349 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 RASA1P20936 1047 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 EDEM1Q92611 657 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 PNPLA8Q9NP80 782 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 DHRS7Q9Y394 339 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 GJA8P48165 433 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 ARHGEF19Q8IW93 802 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 ING5Q8WYH8 240 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 PGLYRP2Q96PD5 576 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 ATG10Q9H0Y0 220 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 ACOT9Q9Y305 439 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 RB1P06400 928 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 UBA1P22314 1058 aaKnown RBP16.66■□□□□ 0.26
PTCH1-201ENST00000331920 CBX3Q13185 183 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 EFR3AQ14156 821 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 ART5Q96L15 291 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 TBATAQ96M53 351 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 C9orf16Q9BUW7 83 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 ABCG8Q9H221 673 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 RBMX2Q9Y388 322 aaKnown RBP16.66■□□□□ 0.26
PTCH1-201ENST00000331920 PDX1P52945 283 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 PPP1R26Q5T8A7 1209 aaPredicted RBP16.66■□□□□ 0.26
PTCH1-201ENST00000331920 SEC24AO95486 1093 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 S100A2P29034 98 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 BNC1Q01954 994 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 C5orf22Q49AR2 442 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 DPF2Q92785 391 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 APBA2Q99767 749 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 TARS2Q9BW92 718 aaKnown RBP16.66■□□□□ 0.26
PTCH1-201ENST00000331920 SMPD4Q9NXE4 827 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 TMCO1Q9UM00 188 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 WDR27A2RRH5 827 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 FCHO1O14526 889 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 TSPAN4O14817 238 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 FAM131BQ86XD5 332 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 OFCC1Q8IZS5 231 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 PYDC1Q8WXC3 89 aa16.66■□□□□ 0.26
PTCH1-201ENST00000331920 ITCHQ96J02 903 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms