RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 CALCOCO1Q9P1Z2 691 aa15.53■□□□□ 0.08
UBE3A-228ENST00000638155 RB1CC1Q8TDY2 1594 aa15.53■□□□□ 0.08
UBE3A-228ENST00000638155 SMC1AQ14683 1233 aaKnown RBP15.53■□□□□ 0.08
UBE3A-228ENST00000638155 C22orf23Q9BZE7 217 aa15.53■□□□□ 0.08
UBE3A-228ENST00000638155 SLC3A2P08195 630 aaKnown RBP15.53■□□□□ 0.08
UBE3A-228ENST00000638155 BMS1Q14692 1282 aaKnown RBP15.53■□□□□ 0.08
UBE3A-228ENST00000638155 FYB1O15117 783 aa15.52■□□□□ 0.08
UBE3A-228ENST00000638155 CCDC113Q9H0I3 377 aa15.52■□□□□ 0.08
UBE3A-228ENST00000638155 SETD5Q9C0A6 1442 aa15.52■□□□□ 0.08
UBE3A-228ENST00000638155 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.08
UBE3A-228ENST00000638155 GCOM1H8Y6P7 765 aaPredicted RBP15.52■□□□□ 0.08
UBE3A-228ENST00000638155 DDX58O95786 925 aaKnown RBP15.52■□□□□ 0.08
UBE3A-228ENST00000638155 MYZAPP0CAP1 466 aa15.52■□□□□ 0.08
UBE3A-228ENST00000638155 CCDC27Q2M243 656 aa15.52■□□□□ 0.08
UBE3A-228ENST00000638155 KIAA1328Q86T90 577 aa15.52■□□□□ 0.07
UBE3A-228ENST00000638155 PDCL2Q8N4E4 241 aa15.52■□□□□ 0.07
UBE3A-228ENST00000638155 RRP1P56182 461 aaKnown RBP15.52■□□□□ 0.07
UBE3A-228ENST00000638155 PUS7Q96PZ0 661 aaKnown RBP15.52■□□□□ 0.07
UBE3A-228ENST00000638155 GBP3Q9H0R5 595 aa15.52■□□□□ 0.07
UBE3A-228ENST00000638155 IBSPP21815 317 aaPredicted RBP15.52■□□□□ 0.07
UBE3A-228ENST00000638155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.51■□□□□ 0.072e-6■■■□□ 17.3
UBE3A-228ENST00000638155 TAF4BQ92750 862 aa15.51■□□□□ 0.07
UBE3A-228ENST00000638155 NFKBIBQ15653 356 aa15.51■□□□□ 0.07
UBE3A-228ENST00000638155 UBE4AQ14139 1066 aa15.5■□□□□ 0.07
UBE3A-228ENST00000638155 SYTL4Q96C24 671 aaPredicted RBP15.5■□□□□ 0.07
UBE3A-228ENST00000638155 TRAK2O60296 914 aa15.5■□□□□ 0.07
UBE3A-228ENST00000638155 PPM1FP49593 454 aaPredicted RBP15.5■□□□□ 0.07
UBE3A-228ENST00000638155 BCL2L13Q9BXK5 485 aa15.49■□□□□ 0.07
UBE3A-228ENST00000638155 CETN2P41208 172 aa15.49■□□□□ 0.07
UBE3A-228ENST00000638155 C6orf163Q5TEZ5 329 aa15.49■□□□□ 0.07
UBE3A-228ENST00000638155 SSR1P43307 286 aaKnown RBP15.49■□□□□ 0.07
UBE3A-228ENST00000638155 RRP7AQ9Y3A4 280 aaKnown RBP15.49■□□□□ 0.07
UBE3A-228ENST00000638155 POTEJP0CG39 1038 aa15.49■□□□□ 0.07
UBE3A-228ENST00000638155 GIGYF2Q6Y7W6 1299 aaKnown RBP15.49■□□□□ 0.07
UBE3A-228ENST00000638155 DNAI2Q9GZS0 605 aa15.49■□□□□ 0.07
UBE3A-228ENST00000638155 RNF187Q5TA31 235 aaPredicted RBP15.49■□□□□ 0.07
UBE3A-228ENST00000638155 TNMDQ9H2S6 317 aa15.49■□□□□ 0.07
UBE3A-228ENST00000638155 IFFO1Q0D2I5 559 aa15.48■□□□□ 0.07
UBE3A-228ENST00000638155 TEFQ10587 303 aa15.48■□□□□ 0.07
UBE3A-228ENST00000638155 WASHC4Q2M389 1173 aa15.48■□□□□ 0.07
UBE3A-228ENST00000638155 NGEFQ8N5V2 710 aa15.48■□□□□ 0.07
UBE3A-228ENST00000638155 CRBNQ96SW2 442 aa15.48■□□□□ 0.07
UBE3A-228ENST00000638155 STK38Q15208 465 aa15.48■□□□□ 0.07
UBE3A-228ENST00000638155 CNTROBQ8N137 903 aa15.48■□□□□ 0.07
UBE3A-228ENST00000638155 TIGD1Q96MW7 591 aa15.48■□□□□ 0.07
UBE3A-228ENST00000638155 ZNF397Q8NF99 534 aaPredicted RBP15.48■□□□□ 0.07
UBE3A-228ENST00000638155 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
UBE3A-228ENST00000638155 MTMR7Q9Y216 660 aa15.47■□□□□ 0.07
UBE3A-228ENST00000638155 FERP16591 822 aa15.47■□□□□ 0.07
UBE3A-228ENST00000638155 SOGA3Q5TF21 947 aa15.47■□□□□ 0.07
UBE3A-228ENST00000638155 EPB41L2O43491 1005 aaKnown RBP15.47■□□□□ 0.07
UBE3A-228ENST00000638155 MYBBP1AQ9BQG0 1328 aaKnown RBP15.47■□□□□ 0.07
UBE3A-228ENST00000638155 DZIP1LQ8IYY4 767 aaKnown RBP15.46■□□□□ 0.07
UBE3A-228ENST00000638155 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.46■□□□□ 0.07
UBE3A-228ENST00000638155 V9GYY5 206 aaPredicted RBP15.46■□□□□ 0.07
UBE3A-228ENST00000638155 MATR3P43243 847 aaKnown RBP eCLIP15.46■□□□□ 0.074e-6■■■■□ 24.9
UBE3A-228ENST00000638155 WDR66Q8TBY9 1149 aa15.46■□□□□ 0.07
UBE3A-228ENST00000638155 NAP1L3Q99457 506 aaPredicted RBP15.46■□□□□ 0.07
UBE3A-228ENST00000638155 POLR3GO15318 223 aaPredicted RBP15.46■□□□□ 0.07
UBE3A-228ENST00000638155 UBXN4Q92575 508 aa15.46■□□□□ 0.07
UBE3A-228ENST00000638155 GOPCQ9HD26 462 aa15.46■□□□□ 0.07
UBE3A-228ENST00000638155 MCM2P49736 904 aa15.46■□□□□ 0.06
UBE3A-228ENST00000638155 FAM114A1Q8IWE2 563 aa15.46■□□□□ 0.06
UBE3A-228ENST00000638155 IMMTQ16891 758 aaKnown RBP15.45■□□□□ 0.06
UBE3A-228ENST00000638155 ARHGAP29Q52LW3 1261 aa15.45■□□□□ 0.06
UBE3A-228ENST00000638155 SPECC1LQ69YQ0 1117 aa15.45■□□□□ 0.06
UBE3A-228ENST00000638155 ERC1Q8IUD2 1116 aa15.45■□□□□ 0.06
UBE3A-228ENST00000638155 PLIN1O60240 522 aa15.45■□□□□ 0.06
UBE3A-228ENST00000638155 HOOK3Q86VS8 718 aa15.45■□□□□ 0.06
UBE3A-228ENST00000638155 DNAJC2Q99543 621 aaKnown RBP15.45■□□□□ 0.06
UBE3A-228ENST00000638155 GSTTP1A0A1W2PQM5 241 aa15.45■□□□□ 0.06
UBE3A-228ENST00000638155 CDC45O75419 566 aa15.45■□□□□ 0.06
UBE3A-228ENST00000638155 TNNT1P13805 278 aa15.45■□□□□ 0.06
UBE3A-228ENST00000638155 EIF2S2P20042 333 aaKnown RBP15.44■□□□□ 0.06
UBE3A-228ENST00000638155 ZHX3Q9H4I2 956 aa15.44■□□□□ 0.06
UBE3A-228ENST00000638155 KIF27Q86VH2 1401 aa15.44■□□□□ 0.06
UBE3A-228ENST00000638155 KIF2AO00139 706 aaPredicted RBP15.44■□□□□ 0.06
UBE3A-228ENST00000638155 COG6Q9Y2V7 657 aa15.44■□□□□ 0.06
UBE3A-228ENST00000638155 FIBPO43427 364 aa15.44■□□□□ 0.06
UBE3A-228ENST00000638155 KDM4AO75164 1064 aa15.44■□□□□ 0.06
UBE3A-228ENST00000638155 PPP1R1BQ9UD71 204 aaPredicted RBP15.44■□□□□ 0.06
UBE3A-228ENST00000638155 CEBPZQ03701 1054 aaKnown RBP15.43■□□□□ 0.06
UBE3A-228ENST00000638155 ATP2B1P20020 1258 aa15.43■□□□□ 0.06
UBE3A-228ENST00000638155 BRPF3Q9ULD4 1205 aa15.43■□□□□ 0.06
UBE3A-228ENST00000638155 PRPF40AO75400 957 aaKnown RBP15.43■□□□□ 0.06
UBE3A-228ENST00000638155 ME1P48163 572 aa15.42■□□□□ 0.06
UBE3A-228ENST00000638155 TBC1D2BQ9UPU7 963 aa15.42■□□□□ 0.06
UBE3A-228ENST00000638155 HIP1O00291 1037 aa15.42■□□□□ 0.06
UBE3A-228ENST00000638155 PKD2Q13563 968 aa15.42■□□□□ 0.06
UBE3A-228ENST00000638155 ZBED9Q6R2W3 1325 aa15.42■□□□□ 0.06
UBE3A-228ENST00000638155 COMMD10Q9Y6G5 202 aa15.42■□□□□ 0.06
UBE3A-228ENST00000638155 CCDC160A6NGH7 325 aa15.42■□□□□ 0.06
UBE3A-228ENST00000638155 ELL2O00472 640 aaPredicted RBP15.41■□□□□ 0.06
UBE3A-228ENST00000638155 CASQ1P31415 396 aa15.41■□□□□ 0.06
UBE3A-228ENST00000638155 HOMER2Q9NSB8 354 aa15.41■□□□□ 0.06
UBE3A-228ENST00000638155 PPP1R12BO60237 982 aaPredicted RBP15.41■□□□□ 0.06
UBE3A-228ENST00000638155 NEUROD6Q96NK8 337 aa15.41■□□□□ 0.06
UBE3A-228ENST00000638155 API5Q9BZZ5 524 aaKnown RBP15.41■□□□□ 0.06
UBE3A-228ENST00000638155 CGNQ9P2M7 1197 aaKnown RBP15.41■□□□□ 0.06
UBE3A-228ENST00000638155 TMCO5BA8MYB1 307 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms