RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 C6orf118Q5T5N4 469 aa7.56□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 CNTNAP3BQ96NU0 1288 aa7.56□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 CNTNAP3Q9BZ76 1288 aa7.56□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 IGHA1P01876 353 aa7.55□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 GPR161Q8N6U8 529 aaKnown RBP7.55□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 EVA1BQ9NVM1 165 aa7.55□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 XP32Q5T750 250 aa7.54□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 ZNF511Q8NB15 262 aa7.54□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 ZFAND3Q9H8U3 227 aa7.54□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 DNMT3AQ9Y6K1 912 aaPredicted RBP7.54□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 ZIC2O95409 532 aaPredicted RBP7.53□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 MDM2Q00987 491 aaPredicted RBP7.53□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 PTPRNQ16849 979 aa7.53□□□□□ -1.2
NPHP3-ACAD11-202ENST00000632629 IRS1P35568 1242 aa7.52□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 KCNH2Q12809 1159 aa7.52□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 GPIHBP1Q8IV16 184 aa7.52□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 ITPKCQ96DU7 683 aa7.52□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 C6orf229H3BNL8 230 aa7.51□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 ZNF385CQ66K41 422 aaPredicted RBP7.51□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 SVOPQ8N4V2 548 aa7.51□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 DNMT3LQ9UJW3 386 aa7.51□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 BMP2P12643 396 aa7.5□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 COL25A1Q9BXS0 654 aaPredicted RBP7.5□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 PCDHGC3Q9UN70 934 aa7.5□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 UPP2O95045 317 aa7.49□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 FOXK2Q01167 660 aa7.49□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 NUTM1Q86Y26 1132 aa7.49□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 FAM174AQ8TBP5 190 aa7.49□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 CDK15Q96Q40 435 aa7.49□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 SOS2Q07890 1332 aaPredicted RBP7.49□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 FDX1P10109 184 aa7.48□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 ARID5BQ14865 1188 aa7.48□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 LINC00528Q8N1L1 170 aa7.48□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 MAP2K5Q13163 448 aa7.47□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 KANK3Q6NY19 840 aa7.47□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 WHAMMQ8TF30 809 aa7.47□□□□□ -1.21
NPHP3-ACAD11-202ENST00000632629 IRF6O14896 467 aa7.46□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 ARHGEF15O94989 841 aa7.46□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 NR3C2P08235 984 aa7.46□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 NR5A1Q13285 461 aa7.46□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 RNFT1Q5M7Z0 435 aa7.46□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 MEIOBQ8N635 442 aa7.46□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 MARSP56192 900 aaKnown RBP7.45□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 NANOS1Q8WY41 292 aaKnown RBP7.45□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 FAM217BQ9NTX9 383 aaPredicted RBP7.45□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 SLURP2P0DP57 97 aa7.44□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 GRM5P41594 1212 aa7.44□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 PTSQ03393 145 aa7.44□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 FOXJ1Q92949 421 aa7.44□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.43□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 PRR7Q8TB68 274 aa7.43□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 SPTLC1O15269 473 aa7.42□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 ADAM23O75077 832 aa7.42□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 DESI1Q6ICB0 168 aa7.42□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.42□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 SCARF2Q96GP6 870 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 GPCPD1Q9NPB8 672 aa7.42□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 MINK1Q8N4C8 1332 aaPredicted RBP7.42□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 TSEN34Q9BSV6 310 aaKnown RBP7.41□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 TTLL8A6PVC2 850 aa7.4□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 CTHP32929 405 aa7.4□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 CLCN1P35523 988 aa7.4□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 CCDC155Q8N6L0 562 aa7.4□□□□□ -1.22
NPHP3-ACAD11-202ENST00000632629 FIGNL2A6NMB9 653 aa7.39□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 NDUFV2P19404 249 aa7.39□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 SPDYE5A6NIY4 337 aa7.38□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 MSTNO14793 375 aa7.38□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 MTMR2Q13614 643 aa7.38□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 C4orf48Q5BLP8 95 aa7.38□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 VWA5B2Q8N398 1253 aa7.38□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 SPIRE2Q8WWL2 714 aa7.38□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 AGERQ15109 404 aa7.37□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 PLA2G4EQ3MJ16 856 aa7.37□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 LYPD8Q6UX82 237 aa7.37□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 SLC35F4A4IF30 521 aa7.36□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 MOXD2PA6NHM9 499 aa7.36□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 SLC24A1O60721 1099 aa7.36□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 CCDC102AQ96A19 550 aa7.36□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 CDC14CA4D256 554 aa7.35□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 ITGA6P23229 1130 aa7.35□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 LYPD4Q6UWN0 246 aa7.35□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 SV2AQ7L0J3 742 aa7.35□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 BPHLQ86WA6 291 aaPredicted RBP7.35□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 KRI1Q8N9T8 703 aaKnown RBP7.35□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 SPOCK3Q9BQ16 436 aa7.35□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 MAP10Q9P2G4 905 aa7.35□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 ADAMTS2O95450 1211 aa7.34□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 FSHRP23945 695 aa7.34□□□□□ -1.23
NPHP3-ACAD11-202ENST00000632629 F12P00748 615 aaPredicted RBP7.33□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 BARGINQ6ZT62 677 aa7.33□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 DCAF5Q96JK2 942 aa7.33□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 EMILIN1Q9Y6C2 1016 aa7.33□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 ZMYND10O75800 440 aa7.32□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 ITGB2P05107 769 aa7.32□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 SSTR3P32745 418 aaPredicted RBP7.32□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 MAP3K10Q02779 954 aa7.32□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 SPINT1O43278 529 aa7.31□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 CELA2BP08218 269 aaPredicted RBP7.31□□□□□ -1.24
NPHP3-ACAD11-202ENST00000632629 VASH1Q7L8A9 365 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms