RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 GZF1Q9H116 711 aaPredicted RBP13.41□□□□□ -0.26
SHANK2-219ENST00000606715 MTMR7Q9Y216 660 aa13.41□□□□□ -0.26
SHANK2-219ENST00000606715 NAIPQ13075 1403 aa13.41□□□□□ -0.26
SHANK2-219ENST00000606715 LRPPRCP42704 1394 aaKnown RBP13.41□□□□□ -0.26
SHANK2-219ENST00000606715 SLC26A8Q96RN1 970 aa13.41□□□□□ -0.26
SHANK2-219ENST00000606715 KIF21AQ7Z4S6 1674 aa13.41□□□□□ -0.26
SHANK2-219ENST00000606715 DEKP35659 375 aaKnown RBP13.4□□□□□ -0.26
SHANK2-219ENST00000606715 HMOX1P09601 288 aa13.4□□□□□ -0.26
SHANK2-219ENST00000606715 WASHC4Q2M389 1173 aa13.4□□□□□ -0.26
SHANK2-219ENST00000606715 PHF14O94880 888 aa13.4□□□□□ -0.26
SHANK2-219ENST00000606715 BCL2L13Q9BXK5 485 aa13.4□□□□□ -0.26
SHANK2-219ENST00000606715 ANKRD20A12PQ8NF67 263 aa13.4□□□□□ -0.26
SHANK2-219ENST00000606715 ANO2Q9NQ90 1003 aa13.4□□□□□ -0.26
SHANK2-219ENST00000606715 NBPF1Q3BBV0 1214 aa13.39□□□□□ -0.27
SHANK2-219ENST00000606715 CCDC61Q9Y6R9 512 aa13.39□□□□□ -0.27
SHANK2-219ENST00000606715 EIF4G3O43432 1585 aaKnown RBP13.39□□□□□ -0.27
SHANK2-219ENST00000606715 ABCC5O15440 1437 aa13.39□□□□□ -0.27
SHANK2-219ENST00000606715 DHX29Q7Z478 1369 aaKnown RBP13.39□□□□□ -0.27
SHANK2-219ENST00000606715 KCNH5Q8NCM2 988 aa13.39□□□□□ -0.27
SHANK2-219ENST00000606715 CABP1Q9NZU7 370 aa13.39□□□□□ -0.27
SHANK2-219ENST00000606715 CCDC30Q5VVM6 783 aa13.39□□□□□ -0.27
SHANK2-219ENST00000606715 TOM1L2Q6ZVM7 507 aa13.39□□□□□ -0.27
SHANK2-219ENST00000606715 SPG7Q9UQ90 795 aa13.39□□□□□ -0.27
SHANK2-219ENST00000606715 PLCH2O75038 1416 aa13.39□□□□□ -0.27
SHANK2-219ENST00000606715 PTPN23Q9H3S7 1636 aa13.39□□□□□ -0.27
SHANK2-219ENST00000606715 RNF20Q5VTR2 975 aa13.38□□□□□ -0.27
SHANK2-219ENST00000606715 ATP6V1DQ9Y5K8 247 aa13.38□□□□□ -0.27
SHANK2-219ENST00000606715 ODF2Q5BJF6 829 aa13.38□□□□□ -0.27
SHANK2-219ENST00000606715 CT47A1Q5JQC4 288 aaPredicted RBP13.38□□□□□ -0.27
SHANK2-219ENST00000606715 PPP2R1AP30153 589 aa13.38□□□□□ -0.27
SHANK2-219ENST00000606715 ZNF518AQ6AHZ1 1483 aa13.38□□□□□ -0.27
SHANK2-219ENST00000606715 TNRQ92752 1358 aa13.37□□□□□ -0.27
SHANK2-219ENST00000606715 SAFBQ15424 915 aaKnown RBP eCLIP13.37□□□□□ -0.27
SHANK2-219ENST00000606715 IPO7O95373 1038 aaKnown RBP13.37□□□□□ -0.27
SHANK2-219ENST00000606715 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
SHANK2-219ENST00000606715 PRDM11Q9NQV5 511 aa13.37□□□□□ -0.27
SHANK2-219ENST00000606715 RBM5P52756 815 aaKnown RBP eCLIP13.36□□□□□ -0.27
SHANK2-219ENST00000606715 UGGT2Q9NYU1 1516 aa13.36□□□□□ -0.27
SHANK2-219ENST00000606715 BECN2A8MW95 431 aa13.36□□□□□ -0.27
SHANK2-219ENST00000606715 REC8O95072 547 aa13.36□□□□□ -0.27
SHANK2-219ENST00000606715 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
SHANK2-219ENST00000606715 HOOK1Q9UJC3 728 aaKnown RBP13.36□□□□□ -0.27
SHANK2-219ENST00000606715 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
SHANK2-219ENST00000606715 GOLGA6L19H0YKK7 550 aa13.36□□□□□ -0.27
SHANK2-219ENST00000606715 DDX54Q8TDD1 881 aaKnown RBP13.36□□□□□ -0.27
SHANK2-219ENST00000606715 WDHD1O75717 1129 aaPredicted RBP13.36□□□□□ -0.27
SHANK2-219ENST00000606715 ERC2O15083 957 aa13.36□□□□□ -0.27
SHANK2-219ENST00000606715 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
SHANK2-219ENST00000606715 FAM135AQ9P2D6 1515 aa13.35□□□□□ -0.27
SHANK2-219ENST00000606715 GNAI3P08754 354 aa13.35□□□□□ -0.27
SHANK2-219ENST00000606715 COG6Q9Y2V7 657 aa13.35□□□□□ -0.27
SHANK2-219ENST00000606715 CT47B1P0C2W7 299 aaPredicted RBP13.35□□□□□ -0.27
SHANK2-219ENST00000606715 BRMS1Q9HCU9 246 aa13.35□□□□□ -0.27
SHANK2-219ENST00000606715 NCOA1Q15788 1441 aa13.35□□□□□ -0.27
SHANK2-219ENST00000606715 SLC3A2P08195 630 aaKnown RBP13.35□□□□□ -0.27
SHANK2-219ENST00000606715 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
SHANK2-219ENST00000606715 CCDC70Q6NSX1 233 aa13.34□□□□□ -0.27
SHANK2-219ENST00000606715 TCP11L2Q8N4U5 519 aa13.34□□□□□ -0.27
SHANK2-219ENST00000606715 GNL3LQ9NVN8 582 aaKnown RBP13.34□□□□□ -0.27
SHANK2-219ENST00000606715 NUDT16Q96DE0 195 aaKnown RBP13.33□□□□□ -0.27
SHANK2-219ENST00000606715 ITSN2Q9NZM3 1697 aa13.33□□□□□ -0.28
SHANK2-219ENST00000606715 ATP2B2Q01814 1243 aa13.33□□□□□ -0.28
SHANK2-219ENST00000606715 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.33□□□□□ -0.28
SHANK2-219ENST00000606715 UBTFL1P0CB47 393 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-219ENST00000606715 KIAA0556O60303 1618 aa13.32□□□□□ -0.28
SHANK2-219ENST00000606715 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
SHANK2-219ENST00000606715 CABP4P57796 275 aa13.32□□□□□ -0.28
SHANK2-219ENST00000606715 NBPF8Q3BBV2 869 aa13.32□□□□□ -0.28
SHANK2-219ENST00000606715 XBP1P17861 261 aa13.32□□□□□ -0.28
SHANK2-219ENST00000606715 ATP10BO94823 1461 aa13.32□□□□□ -0.28
SHANK2-219ENST00000606715 FOXD4L6Q3SYB3 417 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-219ENST00000606715 FOXD4L3Q6VB84 417 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-219ENST00000606715 ADAMTS8Q9UP79 889 aa13.32□□□□□ -0.28
SHANK2-219ENST00000606715 FAM161AQ3B820 660 aa13.32□□□□□ -0.28
SHANK2-219ENST00000606715 ZFYVE27Q5T4F4 411 aa13.32□□□□□ -0.28
SHANK2-219ENST00000606715 CNNM1Q9NRU3 951 aa13.32□□□□□ -0.28
SHANK2-219ENST00000606715 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
SHANK2-219ENST00000606715 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
SHANK2-219ENST00000606715 CRBNQ96SW2 442 aa13.31□□□□□ -0.28
SHANK2-219ENST00000606715 ABCC10Q5T3U5 1492 aa13.31□□□□□ -0.28
SHANK2-219ENST00000606715 NUP160Q12769 1436 aa13.3□□□□□ -0.28
SHANK2-219ENST00000606715 TOM1O60784 492 aa13.3□□□□□ -0.28
SHANK2-219ENST00000606715 EPS15P42566 896 aa13.3□□□□□ -0.28
SHANK2-219ENST00000606715 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
SHANK2-219ENST00000606715 ZNF530Q6P9A1 599 aaPredicted RBP13.3□□□□□ -0.28
SHANK2-219ENST00000606715 CADPS2Q86UW7 1296 aa13.3□□□□□ -0.28
SHANK2-219ENST00000606715 SULT6B1Q6IMI4 303 aa13.3□□□□□ -0.28
SHANK2-219ENST00000606715 ZNF428Q96B54 188 aa13.3□□□□□ -0.28
SHANK2-219ENST00000606715 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
SHANK2-219ENST00000606715 FCHSD2O94868 740 aa13.29□□□□□ -0.28
SHANK2-219ENST00000606715 WDR63Q8IWG1 891 aa13.29□□□□□ -0.28
SHANK2-219ENST00000606715 A2MP01023 1474 aa13.29□□□□□ -0.28
SHANK2-219ENST00000606715 DUOX2Q9NRD8 1548 aa13.29□□□□□ -0.28
SHANK2-219ENST00000606715 MSH6P52701 1360 aa13.29□□□□□ -0.28
SHANK2-219ENST00000606715 IDI1Q13907 227 aa13.28□□□□□ -0.28
SHANK2-219ENST00000606715 AMOTL2Q9Y2J4 779 aa13.28□□□□□ -0.28
SHANK2-219ENST00000606715 GPATCH8Q9UKJ3 1502 aaKnown RBP13.28□□□□□ -0.28
SHANK2-219ENST00000606715 RBM19Q9Y4C8 960 aaKnown RBP13.28□□□□□ -0.28
SHANK2-219ENST00000606715 ZSCAN29Q8IWY8 852 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-219ENST00000606715 NINLQ9Y2I6 1382 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms