RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 NWD2Q9ULI1 1742 aa17.18■□□□□ 0.34
CCDC84-209ENST00000580556 EIF3AQ14152 1382 aaKnown RBP17.17■□□□□ 0.34
CCDC84-209ENST00000580556 FAM83GA6ND36 823 aa17.17■□□□□ 0.34
CCDC84-209ENST00000580556 FAM98CQ17RN3 349 aaKnown RBP17.17■□□□□ 0.34
CCDC84-209ENST00000580556 TNS3Q68CZ2 1445 aa17.17■□□□□ 0.34
CCDC84-209ENST00000580556 LMOD2Q6P5Q4 547 aa17.16■□□□□ 0.34
CCDC84-209ENST00000580556 NRAPQ86VF7 1730 aa17.14■□□□□ 0.33
CCDC84-209ENST00000580556 PHF8Q9UPP1 1060 aa17.14■□□□□ 0.33
CCDC84-209ENST00000580556 USP47Q96K76 1375 aa17.14■□□□□ 0.33
CCDC84-209ENST00000580556 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
CCDC84-209ENST00000580556 RGPD1P0DJD0 1748 aa17.11■□□□□ 0.33
CCDC84-209ENST00000580556 PSME1Q06323 249 aa17.11■□□□□ 0.33
CCDC84-209ENST00000580556 EZH2Q15910 746 aaKnown RBP17.11■□□□□ 0.33
CCDC84-209ENST00000580556 BTG4Q9NY30 223 aa17.11■□□□□ 0.33
CCDC84-209ENST00000580556 SBNO2Q9Y2G9 1366 aa17.11■□□□□ 0.33
CCDC84-209ENST00000580556 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
CCDC84-209ENST00000580556 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
CCDC84-209ENST00000580556 PMFBP1Q8TBY8 1022 aa17.09■□□□□ 0.33
CCDC84-209ENST00000580556 PRAM1Q96QH2 718 aa17.09■□□□□ 0.33
CCDC84-209ENST00000580556 CENPJQ9HC77 1338 aaPredicted RBP17.09■□□□□ 0.33
CCDC84-209ENST00000580556 ADGRB2O60241 1585 aa17.09■□□□□ 0.33
CCDC84-209ENST00000580556 QRICH2Q9H0J4 1663 aa17.08■□□□□ 0.32
CCDC84-209ENST00000580556 ARHGEF10O15013 1369 aa17.07■□□□□ 0.32
CCDC84-209ENST00000580556 EIF4G2P78344 907 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC84-209ENST00000580556 SAFB2Q14151 953 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC84-209ENST00000580556 POGKQ9P215 609 aa17.07■□□□□ 0.32
CCDC84-209ENST00000580556 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
CCDC84-209ENST00000580556 DISP2A7MBM2 1401 aa17.05■□□□□ 0.32
CCDC84-209ENST00000580556 YY1P25490 414 aa17.05■□□□□ 0.32
CCDC84-209ENST00000580556 THSD7AQ9UPZ6 1657 aa17.04■□□□□ 0.32
CCDC84-209ENST00000580556 SPATA31A5Q5VU36 1347 aa17.04■□□□□ 0.32
CCDC84-209ENST00000580556 SPATA31A7Q8IWB4 1347 aa17.04■□□□□ 0.32
CCDC84-209ENST00000580556 ST20-MTHFSA0A0A6YYL1 179 aa17.04■□□□□ 0.32
CCDC84-209ENST00000580556 CAMKK2Q96RR4 588 aa17.04■□□□□ 0.32
CCDC84-209ENST00000580556 TRPM3Q9HCF6 1732 aaPredicted RBP17.04■□□□□ 0.32
CCDC84-209ENST00000580556 COL14A1Q05707 1796 aaKnown RBP17.03■□□□□ 0.32
CCDC84-209ENST00000580556 TRIM37O94972 964 aa17.03■□□□□ 0.32
CCDC84-209ENST00000580556 TESK2Q96S53 571 aa17.02■□□□□ 0.32
CCDC84-209ENST00000580556 ALS2Q96Q42 1657 aa17.01■□□□□ 0.31
CCDC84-209ENST00000580556 HSPA5P11021 654 aaKnown RBP17.01■□□□□ 0.31
CCDC84-209ENST00000580556 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
CCDC84-209ENST00000580556 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
CCDC84-209ENST00000580556 APBA3O96018 575 aa16.99■□□□□ 0.31
CCDC84-209ENST00000580556 MINK1Q8N4C8 1332 aaPredicted RBP16.98■□□□□ 0.31
CCDC84-209ENST00000580556 HIRIP3Q9BW71 556 aaPredicted RBP16.97■□□□□ 0.31
CCDC84-209ENST00000580556 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
CCDC84-209ENST00000580556 EVC2Q86UK5 1308 aa16.96■□□□□ 0.31
CCDC84-209ENST00000580556 PRR36Q9H6K5 1346 aa16.96■□□□□ 0.31
CCDC84-209ENST00000580556 ANKARQ7Z5J8 1434 aa16.96■□□□□ 0.31
CCDC84-209ENST00000580556 WASLO00401 505 aaPredicted RBP16.96■□□□□ 0.31
CCDC84-209ENST00000580556 PUS7Q96PZ0 661 aaKnown RBP16.96■□□□□ 0.31
CCDC84-209ENST00000580556 PRDM11Q9NQV5 511 aa16.96■□□□□ 0.31
CCDC84-209ENST00000580556 RREB1Q92766 1687 aa16.96■□□□□ 0.31
CCDC84-209ENST00000580556 NUP188Q5SRE5 1749 aa16.96■□□□□ 0.3
CCDC84-209ENST00000580556 TMF1P82094 1093 aa16.95■□□□□ 0.3
CCDC84-209ENST00000580556 CHRNA2Q15822 529 aa16.95■□□□□ 0.3
CCDC84-209ENST00000580556 FAM196AQ6ZSG2 479 aa16.95■□□□□ 0.3
CCDC84-209ENST00000580556 STRN4Q9NRL3 753 aa16.94■□□□□ 0.3
CCDC84-209ENST00000580556 ATP7BP35670 1465 aa16.93■□□□□ 0.3
CCDC84-209ENST00000580556 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
CCDC84-209ENST00000580556 CDCA8Q53HL2 280 aa16.93■□□□□ 0.3
CCDC84-209ENST00000580556 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
CCDC84-209ENST00000580556 KIAA0232Q92628 1395 aa16.92■□□□□ 0.3
CCDC84-209ENST00000580556 CAMTA1Q9Y6Y1 1673 aa16.91■□□□□ 0.3
CCDC84-209ENST00000580556 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
CCDC84-209ENST00000580556 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
CCDC84-209ENST00000580556 PARD3Q8TEW0 1356 aa16.9■□□□□ 0.3
CCDC84-209ENST00000580556 PPP1R1BQ9UD71 204 aaPredicted RBP16.9■□□□□ 0.3
CCDC84-209ENST00000580556 ITSN1Q15811 1721 aa16.9■□□□□ 0.3
CCDC84-209ENST00000580556 ZC3H6P61129 1189 aaKnown RBP16.89■□□□□ 0.29
CCDC84-209ENST00000580556 SRPK2P78362 688 aaKnown RBP16.89■□□□□ 0.29
CCDC84-209ENST00000580556 NBPF14Q5TI25 921 aa16.89■□□□□ 0.29
CCDC84-209ENST00000580556 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
CCDC84-209ENST00000580556 NGDNQ8NEJ9 315 aaKnown RBP16.89■□□□□ 0.29
CCDC84-209ENST00000580556 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.29
CCDC84-209ENST00000580556 KCNQ2O43526 872 aa16.88■□□□□ 0.29
CCDC84-209ENST00000580556 SPON1Q9HCB6 807 aa16.88■□□□□ 0.29
CCDC84-209ENST00000580556 PHRF1Q9P1Y6 1649 aaKnown RBP16.88■□□□□ 0.29
CCDC84-209ENST00000580556 PDE3BQ13370 1112 aa16.87■□□□□ 0.29
CCDC84-209ENST00000580556 NUDT16Q96DE0 195 aaKnown RBP16.86■□□□□ 0.29
CCDC84-209ENST00000580556 CABP2Q9NPB3 220 aa16.86■□□□□ 0.29
CCDC84-209ENST00000580556 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
CCDC84-209ENST00000580556 LARP1Q6PKG0 1096 aaKnown RBP16.85■□□□□ 0.29
CCDC84-209ENST00000580556 KIF7Q2M1P5 1343 aa16.85■□□□□ 0.29
CCDC84-209ENST00000580556 CCDC7Q96M83 1385 aa16.85■□□□□ 0.29
CCDC84-209ENST00000580556 SSH2Q76I76 1423 aa16.85■□□□□ 0.29
CCDC84-209ENST00000580556 C11orf95C9JLR9 678 aaPredicted RBP16.84■□□□□ 0.29
CCDC84-209ENST00000580556 BARGINQ6ZT62 677 aa16.84■□□□□ 0.29
CCDC84-209ENST00000580556 PPIP5K1Q6PFW1 1433 aa16.84■□□□□ 0.29
CCDC84-209ENST00000580556 MYOM1P52179 1685 aa16.84■□□□□ 0.29
CCDC84-209ENST00000580556 EVA1CP58658 441 aa16.83■□□□□ 0.28
CCDC84-209ENST00000580556 WASHC2AQ641Q2 1341 aa16.83■□□□□ 0.28
CCDC84-209ENST00000580556 PDGFDQ9GZP0 370 aaPredicted RBP16.83■□□□□ 0.28
CCDC84-209ENST00000580556 PLEKHG3A1L390 1219 aa16.82■□□□□ 0.28
CCDC84-209ENST00000580556 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
CCDC84-209ENST00000580556 POLR3AO14802 1390 aaPredicted RBP16.81■□□□□ 0.28
CCDC84-209ENST00000580556 ANO8Q9HCE9 1232 aaPredicted RBP16.81■□□□□ 0.28
CCDC84-209ENST00000580556 TCP11L2Q8N4U5 519 aa16.8■□□□□ 0.28
CCDC84-209ENST00000580556 NRKQ7Z2Y5 1582 aa16.8■□□□□ 0.28
CCDC84-209ENST00000580556 ZNF316A6NFI3 1004 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms