RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 REC8O95072 547 aa18.87■□□□□ 0.61
CACNA1A-202ENST00000573710 USP5P45974 858 aa18.87■□□□□ 0.61
CACNA1A-202ENST00000573710 RAPGEF4Q8WZA2 1011 aa18.87■□□□□ 0.61
CACNA1A-202ENST00000573710 TSPYL4Q9UJ04 414 aa18.87■□□□□ 0.61
CACNA1A-202ENST00000573710 DZIP1Q86YF9 867 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-202ENST00000573710 FAM43AQ8N2R8 423 aa18.86■□□□□ 0.61
CACNA1A-202ENST00000573710 STAMBPO95630 424 aa18.86■□□□□ 0.61
CACNA1A-202ENST00000573710 BAZ1BQ9UIG0 1483 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-202ENST00000573710 SKOR2Q2VWA4 1001 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-202ENST00000573710 HOMER2Q9NSB8 354 aa18.86■□□□□ 0.61
CACNA1A-202ENST00000573710 HNRNPMP52272 730 aaKnown RBP eCLIP18.85■□□□□ 0.61
CACNA1A-202ENST00000573710 TRMT1LQ7Z2T5 733 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-202ENST00000573710 AEBP1Q8IUX7 1158 aa18.85■□□□□ 0.61
CACNA1A-202ENST00000573710 DESP17661 470 aa18.85■□□□□ 0.61
CACNA1A-202ENST00000573710 TBC1D2BQ9UPU7 963 aa18.85■□□□□ 0.61
CACNA1A-202ENST00000573710 MRPS9P82933 396 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-202ENST00000573710 GSE1Q14687 1217 aa18.85■□□□□ 0.61
CACNA1A-202ENST00000573710 BBXQ8WY36 941 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-202ENST00000573710 TNNT1P13805 278 aa18.84■□□□□ 0.61
CACNA1A-202ENST00000573710 CCDC91Q7Z6B0 441 aa18.84■□□□□ 0.61
CACNA1A-202ENST00000573710 NUP133Q8WUM0 1156 aa18.84■□□□□ 0.61
CACNA1A-202ENST00000573710 APBB1IPQ7Z5R6 666 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-202ENST00000573710 STK3Q13188 491 aa18.84■□□□□ 0.61
CACNA1A-202ENST00000573710 EIF3JO75822 258 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-202ENST00000573710 ARL1P40616 181 aaPredicted RBP18.83■□□□□ 0.61
CACNA1A-202ENST00000573710 TTC39AQ5SRH9 613 aa18.83■□□□□ 0.61
CACNA1A-202ENST00000573710 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.83■□□□□ 0.61
CACNA1A-202ENST00000573710 NUP155O75694 1391 aa18.83■□□□□ 0.6
CACNA1A-202ENST00000573710 LIG1P18858 919 aa18.82■□□□□ 0.6
CACNA1A-202ENST00000573710 ERC1Q8IUD2 1116 aa18.82■□□□□ 0.6
CACNA1A-202ENST00000573710 ZNHIT6Q9NWK9 470 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-202ENST00000573710 GPATCH11Q8N954 259 aa18.82■□□□□ 0.6
CACNA1A-202ENST00000573710 TRERF1Q96PN7 1200 aa18.82■□□□□ 0.6
CACNA1A-202ENST00000573710 SERPINC1P01008 464 aa18.82■□□□□ 0.6
CACNA1A-202ENST00000573710 DNA2P51530 1060 aa18.82■□□□□ 0.6
CACNA1A-202ENST00000573710 PPM1EQ8WY54 764 aa18.82■□□□□ 0.6
CACNA1A-202ENST00000573710 FSD1Q9BTV5 496 aa18.81■□□□□ 0.6
CACNA1A-202ENST00000573710 BICDL1Q6ZP65 573 aa18.81■□□□□ 0.6
CACNA1A-202ENST00000573710 TRIM21P19474 475 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-202ENST00000573710 WASHC2AQ641Q2 1341 aa18.81■□□□□ 0.6
CACNA1A-202ENST00000573710 E9PSI1 815 aa18.81■□□□□ 0.6
CACNA1A-202ENST00000573710 CTNNBL1Q8WYA6 563 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-202ENST00000573710 ZKSCAN2Q63HK3 967 aa18.8■□□□□ 0.6
CACNA1A-202ENST00000573710 MACROD2A1Z1Q3 448 aa18.8■□□□□ 0.6
CACNA1A-202ENST00000573710 RB1CC1Q8TDY2 1594 aa18.8■□□□□ 0.6
CACNA1A-202ENST00000573710 ERC2O15083 957 aa18.8■□□□□ 0.6
CACNA1A-202ENST00000573710 CRBNQ96SW2 442 aa18.8■□□□□ 0.6
CACNA1A-202ENST00000573710 CCDC66A2RUB6 948 aa18.79■□□□□ 0.6
CACNA1A-202ENST00000573710 LRRCC1Q9C099 1032 aa18.79■□□□□ 0.6
CACNA1A-202ENST00000573710 MAP4K4O95819 1239 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-202ENST00000573710 IPO4Q8TEX9 1081 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-202ENST00000573710 LNPKQ9C0E8 428 aa18.78■□□□□ 0.6
CACNA1A-202ENST00000573710 ZFP91Q96JP5 570 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-202ENST00000573710 RIPK4P57078 832 aa18.78■□□□□ 0.6
CACNA1A-202ENST00000573710 BMS1Q14692 1282 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-202ENST00000573710 CCDC102AQ96A19 550 aa18.77■□□□□ 0.6
CACNA1A-202ENST00000573710 TIGD1Q96MW7 591 aa18.77■□□□□ 0.6
CACNA1A-202ENST00000573710 KINO60870 393 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-202ENST00000573710 DDX54Q8TDD1 881 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-202ENST00000573710 ZMYND15Q9H091 742 aa18.77■□□□□ 0.6
CACNA1A-202ENST00000573710 TMX1Q9H3N1 280 aa18.76■□□□□ 0.59
CACNA1A-202ENST00000573710 SPATA24Q86W54 205 aa18.76■□□□□ 0.59
CACNA1A-202ENST00000573710 SIL1Q9H173 461 aa18.76■□□□□ 0.59
CACNA1A-202ENST00000573710 ZNF219Q9P2Y4 722 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-202ENST00000573710 ZNF354CQ86Y25 554 aa18.76■□□□□ 0.59
CACNA1A-202ENST00000573710 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
CACNA1A-202ENST00000573710 SLC26A8Q96RN1 970 aa18.75■□□□□ 0.59
CACNA1A-202ENST00000573710 INTS3Q68E01 1043 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-202ENST00000573710 FLIIQ13045 1269 aa18.74■□□□□ 0.59
CACNA1A-202ENST00000573710 PPFIBP1Q86W92 1011 aa18.74■□□□□ 0.59
CACNA1A-202ENST00000573710 CCDC69A6NI79 296 aa18.74■□□□□ 0.59
CACNA1A-202ENST00000573710 CCDC175P0C221 793 aa18.74■□□□□ 0.59
CACNA1A-202ENST00000573710 NASPP49321 788 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-202ENST00000573710 KIAA1328Q86T90 577 aa18.74■□□□□ 0.59
CACNA1A-202ENST00000573710 PANK3Q9H999 370 aa18.73■□□□□ 0.59
CACNA1A-202ENST00000573710 CCDC160A6NGH7 325 aa18.72■□□□□ 0.59
CACNA1A-202ENST00000573710 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
CACNA1A-202ENST00000573710 STIM1Q13586 685 aa18.72■□□□□ 0.59
CACNA1A-202ENST00000573710 CAVIN1Q6NZI2 390 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-202ENST00000573710 CNTROBQ8N137 903 aa18.72■□□□□ 0.59
CACNA1A-202ENST00000573710 GSTTP1A0A1W2PQM5 241 aa18.72■□□□□ 0.59
CACNA1A-202ENST00000573710 UBTFL1P0CB47 393 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-202ENST00000573710 DHX8Q14562 1220 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-202ENST00000573710 NINLQ9Y2I6 1382 aa18.72■□□□□ 0.59
CACNA1A-202ENST00000573710 MYL6BP14649 208 aa18.71■□□□□ 0.59
CACNA1A-202ENST00000573710 UBA5Q9GZZ9 404 aa18.71■□□□□ 0.59
CACNA1A-202ENST00000573710 CFAP57Q96MR6 1250 aa18.71■□□□□ 0.59
CACNA1A-202ENST00000573710 TERF1P54274 439 aa18.71■□□□□ 0.58
CACNA1A-202ENST00000573710 RGS22Q8NE09 1264 aa18.7■□□□□ 0.58
CACNA1A-202ENST00000573710 TTC36A6NLP5 189 aa18.7■□□□□ 0.58
CACNA1A-202ENST00000573710 PABPN1LA6NDY0 278 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-202ENST00000573710 FKBP4Q02790 459 aaKnown RBP eCLIP18.7■□□□□ 0.58
CACNA1A-202ENST00000573710 CYB5RLQ6IPT4 315 aa18.7■□□□□ 0.58
CACNA1A-202ENST00000573710 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-202ENST00000573710 VTI1AQ96AJ9 217 aa18.7■□□□□ 0.58
CACNA1A-202ENST00000573710 STK38Q15208 465 aa18.7■□□□□ 0.58
CACNA1A-202ENST00000573710 RABEP1Q15276 862 aa18.7■□□□□ 0.58
CACNA1A-202ENST00000573710 GNL3LQ9NVN8 582 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-202ENST00000573710 CCDC85AQ96PX6 553 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-202ENST00000573710 PSMA5P28066 241 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms