RNA–Protein interactions for RNA: ENST00000551604.2

CUX2-203, Transcript of cut like homeobox 2, humanhuman

TSL 5

Gene CUX2, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-203ENST00000551604 PPP1R12CQ9BZL4 782 aa8.95□□□□□ -0.98
CUX2-203ENST00000551604 CFAP99D6REC4 459 aa8.94□□□□□ -0.98
CUX2-203ENST00000551604 RFX1P22670 979 aa8.94□□□□□ -0.98
CUX2-203ENST00000551604 LRRN4Q8WUT4 740 aa8.94□□□□□ -0.98
CUX2-203ENST00000551604 BRD1O95696 1058 aa8.93□□□□□ -0.98
CUX2-203ENST00000551604 KCNA1Q09470 495 aa8.93□□□□□ -0.98
CUX2-203ENST00000551604 SEMA3FQ13275 785 aa8.93□□□□□ -0.98
CUX2-203ENST00000551604 Q3C1V9 767 aa8.93□□□□□ -0.98
CUX2-203ENST00000551604 PRR7Q8TB68 274 aa8.93□□□□□ -0.98
CUX2-203ENST00000551604 HLA-CQ95604 372 aa8.93□□□□□ -0.98
CUX2-203ENST00000551604 ALG2Q9H553 416 aa8.93□□□□□ -0.98
CUX2-203ENST00000551604 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.92□□□□□ -0.98
CUX2-203ENST00000551604 ZPR1O75312 459 aa8.92□□□□□ -0.98
CUX2-203ENST00000551604 GGCXP38435 758 aa8.92□□□□□ -0.98
CUX2-203ENST00000551604 EIF4G2P78344 907 aaKnown RBP eCLIP8.92□□□□□ -0.98
CUX2-203ENST00000551604 CFAP70Q5T0N1 1121 aa8.92□□□□□ -0.98
CUX2-203ENST00000551604 RETREG3Q86VR2 466 aa8.92□□□□□ -0.98
CUX2-203ENST00000551604 ADAMTS19Q8TE59 1207 aa8.92□□□□□ -0.98
CUX2-203ENST00000551604 PRR14Q9BWN1 585 aa8.92□□□□□ -0.98
CUX2-203ENST00000551604 GZF1Q9H116 711 aaPredicted RBP8.92□□□□□ -0.98
CUX2-203ENST00000551604 PALM3A6NDB9 673 aaPredicted RBP8.91□□□□□ -0.98
CUX2-203ENST00000551604 DESI1Q6ICB0 168 aa8.91□□□□□ -0.98
CUX2-203ENST00000551604 LMOD1P29536 600 aaPredicted RBP8.9□□□□□ -0.98
CUX2-203ENST00000551604 BLOC1S3Q6QNY0 202 aa8.9□□□□□ -0.98
CUX2-203ENST00000551604 PCDHB3Q9Y5E6 796 aa8.9□□□□□ -0.98
CUX2-203ENST00000551604 TLL1O43897 1013 aa8.89□□□□□ -0.99
CUX2-203ENST00000551604 GPR37L1O60883 481 aa8.89□□□□□ -0.99
CUX2-203ENST00000551604 ZNF787Q6DD87 383 aa8.89□□□□□ -0.99
CUX2-203ENST00000551604 NR6A1Q15406 480 aa8.88□□□□□ -0.99
CUX2-203ENST00000551604 PPEF1O14829 653 aaPredicted RBP8.87□□□□□ -0.99
CUX2-203ENST00000551604 TFIP11Q9UBB9 837 aaKnown RBP8.87□□□□□ -0.99
CUX2-203ENST00000551604 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
CUX2-203ENST00000551604 MFAP1P55081 439 aaKnown RBP8.86□□□□□ -0.99
CUX2-203ENST00000551604 SRPK2P78362 688 aaKnown RBP8.86□□□□□ -0.99
CUX2-203ENST00000551604 B4GALNT3Q6L9W6 998 aa8.86□□□□□ -0.99
CUX2-203ENST00000551604 EPS8L1Q8TE68 723 aa8.86□□□□□ -0.99
CUX2-203ENST00000551604 ZNF592Q92610 1267 aa8.86□□□□□ -0.99
CUX2-203ENST00000551604 EMID1Q96A84 441 aaPredicted RBP8.86□□□□□ -0.99
CUX2-203ENST00000551604 ACTN4O43707 911 aaKnown RBP8.85□□□□□ -0.99
CUX2-203ENST00000551604 ATG7O95352 703 aa8.85□□□□□ -0.99
CUX2-203ENST00000551604 SLC19A1P41440 591 aa8.85□□□□□ -0.99
CUX2-203ENST00000551604 MORN1Q5T089 497 aa8.85□□□□□ -0.99
CUX2-203ENST00000551604 SYMPKQ92797 1274 aaKnown RBP8.85□□□□□ -0.99
CUX2-203ENST00000551604 NR1H3Q13133 447 aa8.84□□□□□ -0.99
CUX2-203ENST00000551604 TRIM67Q6ZTA4 783 aa8.84□□□□□ -0.99
CUX2-203ENST00000551604 MAFBQ9Y5Q3 323 aaPredicted RBP8.84□□□□□ -0.99
CUX2-203ENST00000551604 PER1O15534 1290 aaPredicted RBP8.83□□□□□ -1
CUX2-203ENST00000551604 ATP9BO43861 1147 aa8.83□□□□□ -1
CUX2-203ENST00000551604 LYPD8Q6UX82 237 aa8.83□□□□□ -1
CUX2-203ENST00000551604 UCN2Q96RP3 112 aa8.83□□□□□ -1
CUX2-203ENST00000551604 SLC27A5Q9Y2P5 690 aa8.83□□□□□ -1
CUX2-203ENST00000551604 ZC3H4Q9UPT8 1303 aaKnown RBP8.82□□□□□ -1
CUX2-203ENST00000551604 S1PR4O95977 384 aa8.82□□□□□ -1
CUX2-203ENST00000551604 VRTNQ9H8Y1 702 aa8.82□□□□□ -1
CUX2-203ENST00000551604 SALL2Q9Y467 1007 aaPredicted RBP8.82□□□□□ -1
CUX2-203ENST00000551604 ZBBXA8MT70 800 aa8.81□□□□□ -1
CUX2-203ENST00000551604 RGS22Q8NE09 1264 aa8.81□□□□□ -1
CUX2-203ENST00000551604 USB1Q9BQ65 265 aaKnown RBP8.81□□□□□ -1
CUX2-203ENST00000551604 SPRYD7Q5W111 196 aa8.8□□□□□ -1
CUX2-203ENST00000551604 NFATC2IPQ8NCF5 419 aa8.8□□□□□ -1
CUX2-203ENST00000551604 ZNF775Q96BV0 537 aaPredicted RBP8.8□□□□□ -1
CUX2-203ENST00000551604 FKBPLQ9UIM3 349 aa8.8□□□□□ -1
CUX2-203ENST00000551604 PUS10Q3MIT2 529 aaKnown RBP8.79□□□□□ -1
CUX2-203ENST00000551604 PKDCCQ504Y2 493 aa8.79□□□□□ -1
CUX2-203ENST00000551604 LIAT1Q6ZQX7 453 aa8.79□□□□□ -1
CUX2-203ENST00000551604 TBC1D9Q6ZT07 1266 aa8.79□□□□□ -1
CUX2-203ENST00000551604 MTMR7Q9Y216 660 aa8.78□□□□□ -1
CUX2-203ENST00000551604 TNFRSF10AO00220 468 aa8.77□□□□□ -1.01
CUX2-203ENST00000551604 NR1I2O75469 434 aa8.77□□□□□ -1.01
CUX2-203ENST00000551604 FMNL1O95466 1100 aaPredicted RBP8.77□□□□□ -1.01
CUX2-203ENST00000551604 FBXO45P0C2W1 286 aa8.77□□□□□ -1.01
CUX2-203ENST00000551604 MCCD1P59942 119 aaPredicted RBP8.77□□□□□ -1.01
CUX2-203ENST00000551604 MYT1Q01538 1121 aa8.77□□□□□ -1.01
CUX2-203ENST00000551604 ELOAQ14241 798 aaKnown RBP8.77□□□□□ -1.01
CUX2-203ENST00000551604 PTPRNQ16849 979 aa8.77□□□□□ -1.01
CUX2-203ENST00000551604 CDCA8Q53HL2 280 aa8.77□□□□□ -1.01
CUX2-203ENST00000551604 ZNF598Q86UK7 904 aaKnown RBP8.77□□□□□ -1.01
CUX2-203ENST00000551604 ANKLE1Q8NAG6 615 aa8.77□□□□□ -1.01
CUX2-203ENST00000551604 ARMC2Q8NEN0 867 aa8.77□□□□□ -1.01
CUX2-203ENST00000551604 POTECB2RU33 542 aa8.76□□□□□ -1.01
CUX2-203ENST00000551604 ZNF697Q5TEC3 545 aa8.76□□□□□ -1.01
CUX2-203ENST00000551604 TMEM88BA6NKF7 163 aa8.75□□□□□ -1.01
CUX2-203ENST00000551604 CCDC27Q2M243 656 aa8.75□□□□□ -1.01
CUX2-203ENST00000551604 BRICD5Q6PL45 260 aa8.75□□□□□ -1.01
CUX2-203ENST00000551604 GPKOWQ92917 476 aaPredicted RBP eCLIP8.75□□□□□ -1.01
CUX2-203ENST00000551604 GPSM3Q9Y4H4 160 aa8.75□□□□□ -1.01
CUX2-203ENST00000551604 IVNS1ABPQ9Y6Y0 642 aa8.75□□□□□ -1.01
CUX2-203ENST00000551604 FAM187AA6NFU0 413 aa8.74□□□□□ -1.01
CUX2-203ENST00000551604 JUNDP17535 347 aa8.74□□□□□ -1.01
CUX2-203ENST00000551604 PLA2G2CQ5R387 149 aa8.74□□□□□ -1.01
CUX2-203ENST00000551604 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
CUX2-203ENST00000551604 PLEKHM2Q8IWE5 1019 aa8.74□□□□□ -1.01
CUX2-203ENST00000551604 LZTS3O60299 673 aaPredicted RBP8.73□□□□□ -1.01
CUX2-203ENST00000551604 DGAT1O75907 488 aa8.73□□□□□ -1.01
CUX2-203ENST00000551604 ADH1BP00325 375 aa8.73□□□□□ -1.01
CUX2-203ENST00000551604 F12P00748 615 aaPredicted RBP8.73□□□□□ -1.01
CUX2-203ENST00000551604 SKIP12755 728 aa8.73□□□□□ -1.01
CUX2-203ENST00000551604 CTHP32929 405 aa8.73□□□□□ -1.01
CUX2-203ENST00000551604 PTK2Q05397 1052 aa8.73□□□□□ -1.01
CUX2-203ENST00000551604 SND1Q7KZF4 910 aaKnown RBP eCLIP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms