RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 BAP1Q92560 729 aa9.56□□□□□ -0.88
RAB3IP-214ENST00000550847 GOPCQ9HD26 462 aa9.56□□□□□ -0.88
RAB3IP-214ENST00000550847 RC3H1Q5TC82 1133 aaKnown RBP9.55□□□□□ -0.88
RAB3IP-214ENST00000550847 LRRN4Q8WUT4 740 aa9.55□□□□□ -0.88
RAB3IP-214ENST00000550847 WNT7BP56706 349 aa9.54□□□□□ -0.88
RAB3IP-214ENST00000550847 HELBQ8NG08 1087 aaPredicted RBP9.54□□□□□ -0.88
RAB3IP-214ENST00000550847 ATP1B4Q9UN42 357 aaPredicted RBP9.54□□□□□ -0.88
RAB3IP-214ENST00000550847 RFC5P40937 340 aa9.53□□□□□ -0.88
RAB3IP-214ENST00000550847 FAM187AA6NFU0 413 aa9.52□□□□□ -0.89
RAB3IP-214ENST00000550847 ZNF511Q8NB15 262 aa9.52□□□□□ -0.89
RAB3IP-214ENST00000550847 PCMTD1Q96MG8 357 aaPredicted RBP9.52□□□□□ -0.89
RAB3IP-214ENST00000550847 AP1G2O75843 785 aa9.51□□□□□ -0.89
RAB3IP-214ENST00000550847 J3QL48 77 aa9.5□□□□□ -0.89
RAB3IP-214ENST00000550847 SIAH2O43255 324 aa9.5□□□□□ -0.89
RAB3IP-214ENST00000550847 CYP4X1Q8N118 509 aa9.5□□□□□ -0.89
RAB3IP-214ENST00000550847 FOXJ1Q92949 421 aa9.5□□□□□ -0.89
RAB3IP-214ENST00000550847 HMX1Q9NP08 348 aaPredicted RBP9.5□□□□□ -0.89
RAB3IP-214ENST00000550847 SMPD1P17405 629 aa9.49□□□□□ -0.89
RAB3IP-214ENST00000550847 MYT1Q01538 1121 aa9.49□□□□□ -0.89
RAB3IP-214ENST00000550847 PKDCCQ504Y2 493 aa9.49□□□□□ -0.89
RAB3IP-214ENST00000550847 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
RAB3IP-214ENST00000550847 TRAF7Q6Q0C0 670 aa9.49□□□□□ -0.89
RAB3IP-214ENST00000550847 DGAT1O75907 488 aa9.48□□□□□ -0.89
RAB3IP-214ENST00000550847 USP17L8P0C7I0 530 aa9.48□□□□□ -0.89
RAB3IP-214ENST00000550847 EHBP1Q8NDI1 1231 aa9.48□□□□□ -0.89
RAB3IP-214ENST00000550847 SNIP1Q8TAD8 396 aaKnown RBP9.48□□□□□ -0.89
RAB3IP-214ENST00000550847 EPS8L1Q8TE68 723 aa9.48□□□□□ -0.89
RAB3IP-214ENST00000550847 TLL2Q9Y6L7 1015 aa9.47□□□□□ -0.89
RAB3IP-214ENST00000550847 TTC24A2A3L6 582 aaPredicted RBP9.46□□□□□ -0.9
RAB3IP-214ENST00000550847 NR6A1Q15406 480 aa9.46□□□□□ -0.9
RAB3IP-214ENST00000550847 ST8SIA5O15466 376 aa9.45□□□□□ -0.9
RAB3IP-214ENST00000550847 ALDH1A1P00352 501 aa9.43□□□□□ -0.9
RAB3IP-214ENST00000550847 AVPP01185 164 aa9.43□□□□□ -0.9
RAB3IP-214ENST00000550847 SH3BP5LQ7L8J4 393 aa9.43□□□□□ -0.9
RAB3IP-214ENST00000550847 HPS1Q92902 700 aa9.43□□□□□ -0.9
RAB3IP-214ENST00000550847 SH3RF1Q7Z6J0 888 aa9.42□□□□□ -0.9
RAB3IP-214ENST00000550847 TRIM34Q9BYJ4 488 aa9.42□□□□□ -0.9
RAB3IP-214ENST00000550847 AAASQ9NRG9 546 aa9.42□□□□□ -0.9
RAB3IP-214ENST00000550847 VARSP26640 1264 aaKnown RBP9.41□□□□□ -0.9
RAB3IP-214ENST00000550847 OCSTAMPQ9BR26 566 aa9.41□□□□□ -0.9
RAB3IP-214ENST00000550847 TMEM259Q4ZIN3 620 aa9.4□□□□□ -0.9
RAB3IP-214ENST00000550847 DACH1Q9UI36 760 aa9.4□□□□□ -0.9
RAB3IP-214ENST00000550847 FKBPLQ9UIM3 349 aa9.4□□□□□ -0.9
RAB3IP-214ENST00000550847 NBPF14Q5TI25 921 aa9.39□□□□□ -0.91
RAB3IP-214ENST00000550847 CRIPAKQ8N1N5 446 aa9.39□□□□□ -0.91
RAB3IP-214ENST00000550847 ARMC2Q8NEN0 867 aa9.39□□□□□ -0.91
RAB3IP-214ENST00000550847 GJD4Q96KN9 370 aaPredicted RBP9.39□□□□□ -0.91
RAB3IP-214ENST00000550847 C1QTNF2Q9BXJ5 285 aa9.39□□□□□ -0.91
RAB3IP-214ENST00000550847 AGERQ15109 404 aa9.38□□□□□ -0.91
RAB3IP-214ENST00000550847 BPHLQ86WA6 291 aaPredicted RBP9.38□□□□□ -0.91
RAB3IP-214ENST00000550847 MAGEB6P1A0A0J9YX57 407 aa9.37□□□□□ -0.91
RAB3IP-214ENST00000550847 POTECB2RU33 542 aa9.37□□□□□ -0.91
RAB3IP-214ENST00000550847 MTMR14Q8NCE2 650 aa9.36□□□□□ -0.91
RAB3IP-214ENST00000550847 FAM174AQ8TBP5 190 aa9.36□□□□□ -0.91
RAB3IP-214ENST00000550847 CDK15Q96Q40 435 aa9.36□□□□□ -0.91
RAB3IP-214ENST00000550847 CARD14Q9BXL6 1004 aa9.36□□□□□ -0.91
RAB3IP-214ENST00000550847 SNRKQ9NRH2 765 aa9.36□□□□□ -0.91
RAB3IP-214ENST00000550847 GPR37L1O60883 481 aa9.35□□□□□ -0.91
RAB3IP-214ENST00000550847 SMCPP49901 116 aaPredicted RBP9.35□□□□□ -0.91
RAB3IP-214ENST00000550847 PDXDC2PQ6P474 469 aa9.35□□□□□ -0.91
RAB3IP-214ENST00000550847 MPNDQ8N594 471 aa9.35□□□□□ -0.91
RAB3IP-214ENST00000550847 GPKOWQ92917 476 aaPredicted RBP eCLIP9.35□□□□□ -0.91
RAB3IP-214ENST00000550847 AXIN1O15169 862 aa9.34□□□□□ -0.91
RAB3IP-214ENST00000550847 ARID5BQ14865 1188 aa9.34□□□□□ -0.91
RAB3IP-214ENST00000550847 CTC1Q2NKJ3 1217 aa9.34□□□□□ -0.91
RAB3IP-214ENST00000550847 ERFEQ4G0M1 354 aa9.34□□□□□ -0.91
RAB3IP-214ENST00000550847 WASF2Q9Y6W5 498 aa9.34□□□□□ -0.91
RAB3IP-214ENST00000550847 ADH1CP00326 375 aa9.33□□□□□ -0.92
RAB3IP-214ENST00000550847 NR3C2P08235 984 aa9.33□□□□□ -0.92
RAB3IP-214ENST00000550847 GRM5P41594 1212 aa9.33□□□□□ -0.92
RAB3IP-214ENST00000550847 NNTQ13423 1086 aa9.33□□□□□ -0.92
RAB3IP-214ENST00000550847 TRMT44Q8IYL2 757 aaKnown RBP9.33□□□□□ -0.92
RAB3IP-214ENST00000550847 ARHGAP9Q9BRR9 750 aa9.33□□□□□ -0.92
RAB3IP-214ENST00000550847 ZC3H4Q9UPT8 1303 aaKnown RBP9.32□□□□□ -0.92
RAB3IP-214ENST00000550847 BANK1Q8NDB2 785 aa9.32□□□□□ -0.92
RAB3IP-214ENST00000550847 ADAM32Q8TC27 787 aa9.3□□□□□ -0.92
RAB3IP-214ENST00000550847 KLF16Q9BXK1 252 aaPredicted RBP9.3□□□□□ -0.92
RAB3IP-214ENST00000550847 FSHRP23945 695 aa9.29□□□□□ -0.92
RAB3IP-214ENST00000550847 MAP4K5Q9Y4K4 846 aa9.29□□□□□ -0.92
RAB3IP-214ENST00000550847 BMP1P13497 986 aa9.28□□□□□ -0.92
RAB3IP-214ENST00000550847 PTK2Q05397 1052 aa9.28□□□□□ -0.92
RAB3IP-214ENST00000550847 ZNF787Q6DD87 383 aa9.28□□□□□ -0.92
RAB3IP-214ENST00000550847 GMPR2Q9P2T1 348 aaKnown RBP9.28□□□□□ -0.92
RAB3IP-214ENST00000550847 TIMP2P16035 220 aa9.27□□□□□ -0.93
RAB3IP-214ENST00000550847 VASH1Q7L8A9 365 aaPredicted RBP9.27□□□□□ -0.93
RAB3IP-214ENST00000550847 ATP13A2Q9NQ11 1180 aa9.27□□□□□ -0.93
RAB3IP-214ENST00000550847 GPSM3Q9Y4H4 160 aa9.27□□□□□ -0.93
RAB3IP-214ENST00000550847 SOCS7O14512 581 aa9.26□□□□□ -0.93
RAB3IP-214ENST00000550847 CAPN5O15484 640 aaPredicted RBP9.26□□□□□ -0.93
RAB3IP-214ENST00000550847 TRIM46Q7Z4K8 759 aa9.26□□□□□ -0.93
RAB3IP-214ENST00000550847 ZBTB33Q86T24 672 aa9.26□□□□□ -0.93
RAB3IP-214ENST00000550847 ZFAND3Q9H8U3 227 aa9.26□□□□□ -0.93
RAB3IP-214ENST00000550847 FBXO45P0C2W1 286 aa9.25□□□□□ -0.93
RAB3IP-214ENST00000550847 WDR4P57081 412 aaKnown RBP9.25□□□□□ -0.93
RAB3IP-214ENST00000550847 NR5A1Q13285 461 aa9.25□□□□□ -0.93
RAB3IP-214ENST00000550847 ITPKCQ96DU7 683 aa9.25□□□□□ -0.93
RAB3IP-214ENST00000550847 SLC10A4Q96EP9 437 aa9.24□□□□□ -0.93
RAB3IP-214ENST00000550847 TBC1D2BQ9UPU7 963 aa9.24□□□□□ -0.93
RAB3IP-214ENST00000550847 ZIC2O95409 532 aaPredicted RBP9.23□□□□□ -0.93
RAB3IP-214ENST00000550847 PNMA1Q8ND90 353 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms