RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 LRSAM1Q6UWE0 723 aa10.81□□□□□ -0.68
TSC1-208ENST00000545250 SMC1AQ14683 1233 aaKnown RBP10.81□□□□□ -0.68
TSC1-208ENST00000545250 SCLT1Q96NL6 688 aa10.81□□□□□ -0.68
TSC1-208ENST00000545250 SHTN1A0MZ66 631 aa10.81□□□□□ -0.68
TSC1-208ENST00000545250 PPP1R1BQ9UD71 204 aaPredicted RBP10.81□□□□□ -0.68
TSC1-208ENST00000545250 CCDC57Q2TAC2 916 aa10.81□□□□□ -0.68
TSC1-208ENST00000545250 KIF6Q6ZMV9 814 aa10.81□□□□□ -0.68
TSC1-208ENST00000545250 ZNF397Q8NF99 534 aaPredicted RBP10.81□□□□□ -0.68
TSC1-208ENST00000545250 ZHX3Q9H4I2 956 aa10.81□□□□□ -0.68
TSC1-208ENST00000545250 HIP1O00291 1037 aa10.8□□□□□ -0.68
TSC1-208ENST00000545250 PDCP20941 246 aa10.8□□□□□ -0.68
TSC1-208ENST00000545250 BRPF1P55201 1214 aaPredicted RBP10.8□□□□□ -0.68
TSC1-208ENST00000545250 CEP135Q66GS9 1140 aa10.8□□□□□ -0.68
TSC1-208ENST00000545250 INTS3Q68E01 1043 aaKnown RBP10.8□□□□□ -0.68
TSC1-208ENST00000545250 COG3Q96JB2 828 aa10.8□□□□□ -0.68
TSC1-208ENST00000545250 PUS7Q96PZ0 661 aaKnown RBP10.8□□□□□ -0.68
TSC1-208ENST00000545250 RSPH4AQ5TD94 716 aa10.8□□□□□ -0.68
TSC1-208ENST00000545250 DDX11Q96FC9 970 aa10.8□□□□□ -0.68
TSC1-208ENST00000545250 CBFA2T2O43439 604 aa10.8□□□□□ -0.68
TSC1-208ENST00000545250 MCM3P25205 808 aa10.8□□□□□ -0.68
TSC1-208ENST00000545250 ATP2B2Q01814 1243 aa10.8□□□□□ -0.68
TSC1-208ENST00000545250 DDX12PQ92771 950 aa10.8□□□□□ -0.68
TSC1-208ENST00000545250 BCL2L13Q9BXK5 485 aa10.8□□□□□ -0.68
TSC1-208ENST00000545250 POLR3GO15318 223 aaPredicted RBP10.79□□□□□ -0.68
TSC1-208ENST00000545250 FAM43AQ8N2R8 423 aa10.79□□□□□ -0.68
TSC1-208ENST00000545250 TRIM22Q8IYM9 498 aa10.79□□□□□ -0.68
TSC1-208ENST00000545250 CCER2I3L3R5 266 aa10.79□□□□□ -0.68
TSC1-208ENST00000545250 MTMR7Q9Y216 660 aa10.79□□□□□ -0.68
TSC1-208ENST00000545250 TAOK3Q9H2K8 898 aa10.79□□□□□ -0.68
TSC1-208ENST00000545250 ZNF76P36508 570 aa10.79□□□□□ -0.68
TSC1-208ENST00000545250 FERMT2Q96AC1 680 aa10.79□□□□□ -0.68
TSC1-208ENST00000545250 FAM114A2Q9NRY5 505 aa10.79□□□□□ -0.68
TSC1-208ENST00000545250 CCDC6Q16204 474 aa10.78□□□□□ -0.68
TSC1-208ENST00000545250 PDE3BQ13370 1112 aa10.78□□□□□ -0.68
TSC1-208ENST00000545250 SEPT6Q14141 434 aa10.78□□□□□ -0.68
TSC1-208ENST00000545250 UACAQ9BZF9 1416 aa10.78□□□□□ -0.68
TSC1-208ENST00000545250 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.78□□□□□ -0.68
TSC1-208ENST00000545250 NOL7Q9UMY1 257 aaKnown RBP10.78□□□□□ -0.68
TSC1-208ENST00000545250 VPS36Q86VN1 386 aa10.78□□□□□ -0.68
TSC1-208ENST00000545250 MICALCLQ6ZW33 695 aa10.77□□□□□ -0.69
TSC1-208ENST00000545250 LRRFIP2Q9Y608 721 aaKnown RBP10.77□□□□□ -0.69
TSC1-208ENST00000545250 MAP9Q49MG5 647 aa10.77□□□□□ -0.69
TSC1-208ENST00000545250 CCDC148Q8NFR7 591 aa10.77□□□□□ -0.69
TSC1-208ENST00000545250 GSTTP1A0A1W2PQM5 241 aa10.77□□□□□ -0.69
TSC1-208ENST00000545250 UQCRHLA0A096LP55 91 aa10.76□□□□□ -0.69
TSC1-208ENST00000545250 NOL3O60936 208 aaKnown RBP10.76□□□□□ -0.69
TSC1-208ENST00000545250 FOSBP53539 338 aa10.76□□□□□ -0.69
TSC1-208ENST00000545250 IMMTQ16891 758 aaKnown RBP10.76□□□□□ -0.69
TSC1-208ENST00000545250 DDX46Q7L014 1031 aaKnown RBP10.76□□□□□ -0.69
TSC1-208ENST00000545250 FAM107BQ9H098 131 aa10.76□□□□□ -0.69
TSC1-208ENST00000545250 PSMD1Q99460 953 aa10.76□□□□□ -0.69
TSC1-208ENST00000545250 GOLGA3Q08378 1498 aa10.76□□□□□ -0.69
TSC1-208ENST00000545250 SERPINC1P01008 464 aa10.76□□□□□ -0.69
TSC1-208ENST00000545250 NACAP1Q9BZK3 213 aa10.76□□□□□ -0.69
TSC1-208ENST00000545250 EIF2S2P20042 333 aaKnown RBP10.76□□□□□ -0.69
TSC1-208ENST00000545250 CNTROBQ8N137 903 aa10.76□□□□□ -0.69
TSC1-208ENST00000545250 GBP3Q9H0R5 595 aa10.76□□□□□ -0.69
TSC1-208ENST00000545250 MKRN1Q9UHC7 482 aaKnown RBP10.76□□□□□ -0.69
TSC1-208ENST00000545250 IBSPP21815 317 aaPredicted RBP10.76□□□□□ -0.69
TSC1-208ENST00000545250 OPA1O60313 960 aa10.75□□□□□ -0.69
TSC1-208ENST00000545250 RBM5P52756 815 aaKnown RBP eCLIP10.75□□□□□ -0.69
TSC1-208ENST00000545250 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.694e-6■■□□□ 11.7
TSC1-208ENST00000545250 NEUROD6Q96NK8 337 aa10.75□□□□□ -0.69
TSC1-208ENST00000545250 MPHOSPH6Q99547 160 aaKnown RBP10.75□□□□□ -0.69
TSC1-208ENST00000545250 NOC2LQ9Y3T9 749 aaKnown RBP10.75□□□□□ -0.69
TSC1-208ENST00000545250 TMOD2Q9NZR1 351 aa10.75□□□□□ -0.69
TSC1-208ENST00000545250 HMGB3O15347 200 aaKnown RBP10.75□□□□□ -0.69
TSC1-208ENST00000545250 VIMP08670 466 aaKnown RBP10.75□□□□□ -0.69
TSC1-208ENST00000545250 LARP1Q6PKG0 1096 aaKnown RBP10.75□□□□□ -0.69
TSC1-208ENST00000545250 RIC3Q7Z5B4 369 aa10.75□□□□□ -0.69
TSC1-208ENST00000545250 CTNNA2P26232 953 aa10.75□□□□□ -0.69
TSC1-208ENST00000545250 ZKSCAN2Q63HK3 967 aa10.75□□□□□ -0.69
TSC1-208ENST00000545250 KIAA1328Q86T90 577 aa10.75□□□□□ -0.69
TSC1-208ENST00000545250 PSME1Q06323 249 aa10.75□□□□□ -0.69
TSC1-208ENST00000545250 SCRIBQ14160 1630 aa10.75□□□□□ -0.69
TSC1-208ENST00000545250 NAP1L3Q99457 506 aaPredicted RBP10.75□□□□□ -0.69
TSC1-208ENST00000545250 CCDC14Q49A88 953 aa10.74□□□□□ -0.69
TSC1-208ENST00000545250 ZMYND15Q9H091 742 aa10.74□□□□□ -0.69
TSC1-208ENST00000545250 EHMT1Q9H9B1 1298 aa10.74□□□□□ -0.69
TSC1-208ENST00000545250 ANAPC4Q9UJX5 808 aa10.74□□□□□ -0.69
TSC1-208ENST00000545250 GSE1Q14687 1217 aa10.74□□□□□ -0.69
TSC1-208ENST00000545250 FAM114A1Q8IWE2 563 aa10.74□□□□□ -0.69
TSC1-208ENST00000545250 CLUAP1Q96AJ1 413 aa10.74□□□□□ -0.69
TSC1-208ENST00000545250 ZNF287Q9HBT7 754 aa10.74□□□□□ -0.69
TSC1-208ENST00000545250 ODF2LQ9ULJ1 636 aa10.74□□□□□ -0.69
TSC1-208ENST00000545250 EEA1Q15075 1411 aa10.74□□□□□ -0.69
TSC1-208ENST00000545250 API5Q9BZZ5 524 aaKnown RBP10.73□□□□□ -0.69
TSC1-208ENST00000545250 DDX19BQ9UMR2 479 aa10.73□□□□□ -0.69
TSC1-208ENST00000545250 TIMELESSQ9UNS1 1208 aa10.73□□□□□ -0.69
TSC1-208ENST00000545250 UBE4AQ14139 1066 aa10.73□□□□□ -0.69
TSC1-208ENST00000545250 EIF4G1Q04637 1599 aaKnown RBP10.73□□□□□ -0.69
TSC1-208ENST00000545250 FSD2A1L4K1 749 aa10.73□□□□□ -0.69
TSC1-208ENST00000545250 SH3BP5O60239 455 aa10.73□□□□□ -0.69
TSC1-208ENST00000545250 FGFR1OPO95684 399 aaKnown RBP10.73□□□□□ -0.69
TSC1-208ENST00000545250 CEP112Q8N8E3 955 aa10.73□□□□□ -0.69
TSC1-208ENST00000545250 RAPGEF4Q8WZA2 1011 aa10.73□□□□□ -0.69
TSC1-208ENST00000545250 GOLGA6L9A6NEM1 432 aa10.73□□□□□ -0.69
TSC1-208ENST00000545250 CDKL5O76039 1030 aa10.73□□□□□ -0.69
TSC1-208ENST00000545250 CRACR2AQ9BSW2 395 aa10.73□□□□□ -0.69
TSC1-208ENST00000545250 CCDC113Q9H0I3 377 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 245.2 ms