RNA–Protein interactions for RNA: ENST00000544361.1

QKI-213, Transcript of QKI, KH domain containing RNA binding, human

TSL 5

Gene QKI, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
QKI-213	ENST00000544361	DGAT1	O75907	488 aa		9.31	□□□□□ -0.92
QKI-213	ENST00000544361	LINC01559	Q495D7	138 aa		9.31	□□□□□ -0.92
QKI-213	ENST00000544361	RC3H1	Q5TC82	1133 aa	Known RBP	9.31	□□□□□ -0.92
QKI-213	ENST00000544361	IL27	Q8NEV9	243 aa		9.31	□□□□□ -0.92
QKI-213	ENST00000544361	F12	P00748	615 aa	Predicted RBP	9.3	□□□□□ -0.92
QKI-213	ENST00000544361	SH3BP2	P78314	561 aa		9.3	□□□□□ -0.92
QKI-213	ENST00000544361	EHBP1	Q8NDI1	1231 aa		9.29	□□□□□ -0.92
QKI-213	ENST00000544361	SNIP1	Q8TAD8	396 aa	Known RBP	9.29	□□□□□ -0.92
QKI-213	ENST00000544361	BAP1	Q92560	729 aa		9.29	□□□□□ -0.92
QKI-213	ENST00000544361	FBXO31	Q5XUX0	539 aa	Predicted RBP	9.28	□□□□□ -0.92
QKI-213	ENST00000544361	ZNF511	Q8NB15	262 aa		9.28	□□□□□ -0.92
QKI-213	ENST00000544361	PRKCSH	P14314	528 aa	Predicted RBP	9.26	□□□□□ -0.93
QKI-213	ENST00000544361	MYT1	Q01538	1121 aa		9.26	□□□□□ -0.93
QKI-213	ENST00000544361	CTDSPL2	Q05D32	466 aa		9.26	□□□□□ -0.93
QKI-213	ENST00000544361	PPP2R2D	Q66LE6	453 aa		9.26	□□□□□ -0.93
QKI-213	ENST00000544361	GOPC	Q9HD26	462 aa		9.26	□□□□□ -0.93
QKI-213	ENST00000544361	PCMTD1	Q96MG8	357 aa	Predicted RBP	9.25	□□□□□ -0.93
QKI-213	ENST00000544361		J3QL48	77 aa		9.24	□□□□□ -0.93
QKI-213	ENST00000544361	AP1G2	O75843	785 aa		9.24	□□□□□ -0.93
QKI-213	ENST00000544361	ALDH1A1	P00352	501 aa		9.23	□□□□□ -0.93
QKI-213	ENST00000544361	SMPD1	P17405	629 aa		9.23	□□□□□ -0.93
QKI-213	ENST00000544361	LRRN4	Q8WUT4	740 aa		9.23	□□□□□ -0.93
QKI-213	ENST00000544361	ST8SIA5	O15466	376 aa		9.22	□□□□□ -0.93
QKI-213	ENST00000544361	SIAH2	O43255	324 aa		9.21	□□□□□ -0.94
QKI-213	ENST00000544361	AVP	P01185	164 aa		9.21	□□□□□ -0.94
QKI-213	ENST00000544361	RFC5	P40937	340 aa		9.21	□□□□□ -0.94
QKI-213	ENST00000544361	AGER	Q15109	404 aa		9.21	□□□□□ -0.94
QKI-213	ENST00000544361	NBPF14	Q5TI25	921 aa		9.21	□□□□□ -0.94
QKI-213	ENST00000544361	ARMC2	Q8NEN0	867 aa		9.21	□□□□□ -0.94
QKI-213	ENST00000544361	FOXJ1	Q92949	421 aa		9.21	□□□□□ -0.94
QKI-213	ENST00000544361	TLL2	Q9Y6L7	1015 aa		9.21	□□□□□ -0.94
QKI-213	ENST00000544361	VARS	P26640	1264 aa	Known RBP	9.2	□□□□□ -0.94
QKI-213	ENST00000544361	AAAS	Q9NRG9	546 aa		9.2	□□□□□ -0.94
QKI-213	ENST00000544361	CTC1	Q2NKJ3	1217 aa		9.19	□□□□□ -0.94
QKI-213	ENST00000544361	AXIN1	O15169	862 aa		9.18	□□□□□ -0.94
QKI-213	ENST00000544361	USP17L8	P0C7I0	530 aa		9.18	□□□□□ -0.94
QKI-213	ENST00000544361	BPHL	Q86WA6	291 aa	Predicted RBP	9.18	□□□□□ -0.94
QKI-213	ENST00000544361	CRIPAK	Q8N1N5	446 aa		9.18	□□□□□ -0.94
QKI-213	ENST00000544361	HPS1	Q92902	700 aa		9.18	□□□□□ -0.94
QKI-213	ENST00000544361	WASF2	Q9Y6W5	498 aa		9.18	□□□□□ -0.94
QKI-213	ENST00000544361	NR6A1	Q15406	480 aa		9.17	□□□□□ -0.94
QKI-213	ENST00000544361	C4orf48	Q5BLP8	95 aa		9.17	□□□□□ -0.94
QKI-213	ENST00000544361	FAM174A	Q8TBP5	190 aa		9.17	□□□□□ -0.94
QKI-213	ENST00000544361	HMX1	Q9NP08	348 aa	Predicted RBP	9.16	□□□□□ -0.94
QKI-213	ENST00000544361	MAGEB6P1	A0A0J9YX57	407 aa		9.15	□□□□□ -0.94
QKI-213	ENST00000544361	SMCP	P49901	116 aa	Predicted RBP	9.15	□□□□□ -0.94
QKI-213	ENST00000544361	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	9.15	□□□□□ -0.94	2e-11	■■□□□ 14.1
QKI-213	ENST00000544361	FKBPL	Q9UIM3	349 aa		9.15	□□□□□ -0.94
QKI-213	ENST00000544361	ARID5B	Q14865	1188 aa		9.14	□□□□□ -0.95
QKI-213	ENST00000544361	TMEM259	Q4ZIN3	620 aa		9.14	□□□□□ -0.95
QKI-213	ENST00000544361	ZNF787	Q6DD87	383 aa		9.14	□□□□□ -0.95
QKI-213	ENST00000544361	SH3BP5L	Q7L8J4	393 aa		9.14	□□□□□ -0.95
QKI-213	ENST00000544361	SH3RF1	Q7Z6J0	888 aa		9.14	□□□□□ -0.95
QKI-213	ENST00000544361	EPS8L1	Q8TE68	723 aa		9.13	□□□□□ -0.95
QKI-213	ENST00000544361	CARD14	Q9BXL6	1004 aa		9.13	□□□□□ -0.95
QKI-213	ENST00000544361	NNT	Q13423	1086 aa		9.12	□□□□□ -0.95
QKI-213	ENST00000544361	MPND	Q8N594	471 aa		9.12	□□□□□ -0.95
QKI-213	ENST00000544361	DACH1	Q9UI36	760 aa		9.12	□□□□□ -0.95
QKI-213	ENST00000544361	ZC3H4	Q9UPT8	1303 aa	Known RBP	9.11	□□□□□ -0.95
QKI-213	ENST00000544361	ADH1C	P00326	375 aa		9.11	□□□□□ -0.95
QKI-213	ENST00000544361	C1QTNF2	Q9BXJ5	285 aa		9.11	□□□□□ -0.95
QKI-213	ENST00000544361	POTEC	B2RU33	542 aa		9.1	□□□□□ -0.95
QKI-213	ENST00000544361	PDXDC2P	Q6P474	469 aa		9.1	□□□□□ -0.95
QKI-213	ENST00000544361	PNMA1	Q8ND90	353 aa		9.1	□□□□□ -0.95
QKI-213	ENST00000544361	CDK15	Q96Q40	435 aa		9.1	□□□□□ -0.95
QKI-213	ENST00000544361	ARHGAP9	Q9BRR9	750 aa		9.1	□□□□□ -0.95
QKI-213	ENST00000544361	ERFE	Q4G0M1	354 aa		9.08	□□□□□ -0.96
QKI-213	ENST00000544361	TRMT44	Q8IYL2	757 aa	Known RBP	9.08	□□□□□ -0.96
QKI-213	ENST00000544361	TRIM34	Q9BYJ4	488 aa		9.08	□□□□□ -0.96
QKI-213	ENST00000544361	ATP13A2	Q9NQ11	1180 aa		9.08	□□□□□ -0.96
QKI-213	ENST00000544361	CAPN5	O15484	640 aa	Predicted RBP	9.07	□□□□□ -0.96
QKI-213	ENST00000544361	FSHR	P23945	695 aa		9.07	□□□□□ -0.96
QKI-213	ENST00000544361	PTK2	Q05397	1052 aa		9.07	□□□□□ -0.96
QKI-213	ENST00000544361	GMPR2	Q9P2T1	348 aa	Known RBP	9.07	□□□□□ -0.96
QKI-213	ENST00000544361	VASH1	Q7L8A9	365 aa	Predicted RBP	9.06	□□□□□ -0.96
QKI-213	ENST00000544361	ZBTB33	Q86T24	672 aa		9.06	□□□□□ -0.96
QKI-213	ENST00000544361	SLC10A4	Q96EP9	437 aa		9.06	□□□□□ -0.96
QKI-213	ENST00000544361	MAP4K5	Q9Y4K4	846 aa		9.06	□□□□□ -0.96
QKI-213	ENST00000544361	NR3C2	P08235	984 aa		9.05	□□□□□ -0.96
QKI-213	ENST00000544361	BMP1	P13497	986 aa		9.05	□□□□□ -0.96
QKI-213	ENST00000544361	GRM5	P41594	1212 aa		9.05	□□□□□ -0.96
QKI-213	ENST00000544361	WDR4	P57081	412 aa	Known RBP	9.05	□□□□□ -0.96
QKI-213	ENST00000544361	NR5A1	Q13285	461 aa		9.05	□□□□□ -0.96
QKI-213	ENST00000544361	GPSM3	Q9Y4H4	160 aa		9.05	□□□□□ -0.96
QKI-213	ENST00000544361	C11orf95	C9JLR9	678 aa	Predicted RBP	9.04	□□□□□ -0.96
QKI-213	ENST00000544361	BANK1	Q8NDB2	785 aa		9.04	□□□□□ -0.96
QKI-213	ENST00000544361	ADAM32	Q8TC27	787 aa		9.04	□□□□□ -0.96
QKI-213	ENST00000544361	GJD4	Q96KN9	370 aa	Predicted RBP	9.04	□□□□□ -0.96
QKI-213	ENST00000544361	OCSTAMP	Q9BR26	566 aa		9.04	□□□□□ -0.96
QKI-213	ENST00000544361	TIMP2	P16035	220 aa		9.03	□□□□□ -0.96
QKI-213	ENST00000544361	MTMR14	Q8NCE2	650 aa		9.03	□□□□□ -0.96
QKI-213	ENST00000544361	ZIC2	O95409	532 aa	Predicted RBP	9.01	□□□□□ -0.97
QKI-213	ENST00000544361	ITPKC	Q96DU7	683 aa		9.01	□□□□□ -0.97
QKI-213	ENST00000544361	KLF16	Q9BXK1	252 aa	Predicted RBP	9.01	□□□□□ -0.97
QKI-213	ENST00000544361	SENP2	Q9HC62	589 aa		9.01	□□□□□ -0.97
QKI-213	ENST00000544361	CDV3	Q9UKY7	258 aa	Known RBP	9.01	□□□□□ -0.97
QKI-213	ENST00000544361	APBB1	O00213	710 aa		9	□□□□□ -0.97
QKI-213	ENST00000544361	TRIM46	Q7Z4K8	759 aa		9	□□□□□ -0.97
QKI-213	ENST00000544361	CCDC116	Q8IYX3	515 aa		9	□□□□□ -0.97
QKI-213	ENST00000544361	TRIM47	Q96LD4	638 aa		9	□□□□□ -0.97

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