RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 PCMTD1Q96MG8 357 aaPredicted RBP8.9□□□□□ -0.98
ITGB1-219ENST00000534049 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
ITGB1-219ENST00000534049 SKOR1P84550 965 aa8.88□□□□□ -0.99
ITGB1-219ENST00000534049 EHBP1Q8NDI1 1231 aa8.88□□□□□ -0.99
ITGB1-219ENST00000534049 MRGPRX2Q96LB1 330 aa8.88□□□□□ -0.99
ITGB1-219ENST00000534049 ZNF511Q8NB15 262 aa8.87□□□□□ -0.99
ITGB1-219ENST00000534049 SH3BP2P78314 561 aa8.86□□□□□ -0.99
ITGB1-219ENST00000534049 NBPF14Q5TI25 921 aa8.86□□□□□ -0.99
ITGB1-219ENST00000534049 PROCA1Q8NCQ7 364 aaPredicted RBP8.86□□□□□ -0.99
ITGB1-219ENST00000534049 PER1O15534 1290 aaPredicted RBP8.85□□□□□ -0.99
ITGB1-219ENST00000534049 VARSP26640 1264 aaKnown RBP8.85□□□□□ -0.99
ITGB1-219ENST00000534049 CTC1Q2NKJ3 1217 aa8.85□□□□□ -0.99
ITGB1-219ENST00000534049 BAP1Q92560 729 aa8.85□□□□□ -0.99
ITGB1-219ENST00000534049 GPKOWQ92917 476 aaPredicted RBP eCLIP8.85□□□□□ -0.992e-6■■■■□ 21.7
ITGB1-219ENST00000534049 MAP10Q9P2G4 905 aa8.85□□□□□ -0.99
ITGB1-219ENST00000534049 AVPP01185 164 aa8.84□□□□□ -0.99
ITGB1-219ENST00000534049 CRIPAKQ8N1N5 446 aa8.84□□□□□ -0.99
ITGB1-219ENST00000534049 PNMA1Q8ND90 353 aa8.84□□□□□ -0.99
ITGB1-219ENST00000534049 IL27Q8NEV9 243 aa8.84□□□□□ -0.99
ITGB1-219ENST00000534049 MYT1Q01538 1121 aa8.83□□□□□ -1
ITGB1-219ENST00000534049 LINC01559Q495D7 138 aa8.83□□□□□ -1
ITGB1-219ENST00000534049 BPHLQ86WA6 291 aaPredicted RBP8.83□□□□□ -1
ITGB1-219ENST00000534049 MPNDQ8N594 471 aa8.83□□□□□ -1
ITGB1-219ENST00000534049 ZC3H4Q9UPT8 1303 aaKnown RBP8.82□□□□□ -1
ITGB1-219ENST00000534049 TMEM259Q4ZIN3 620 aa8.82□□□□□ -1
ITGB1-219ENST00000534049 FAM174AQ8TBP5 190 aa8.82□□□□□ -1
ITGB1-219ENST00000534049 AP1G2O75843 785 aa8.81□□□□□ -1
ITGB1-219ENST00000534049 SMCPP49901 116 aaPredicted RBP8.81□□□□□ -1
ITGB1-219ENST00000534049 CTDSPL2Q05D32 466 aa8.81□□□□□ -1
ITGB1-219ENST00000534049 SIAH2O43255 324 aa8.8□□□□□ -1
ITGB1-219ENST00000534049 SMPD1P17405 629 aa8.8□□□□□ -1
ITGB1-219ENST00000534049 RFC5P40937 340 aa8.8□□□□□ -1
ITGB1-219ENST00000534049 WASF2Q9Y6W5 498 aa8.8□□□□□ -1
ITGB1-219ENST00000534049 LCE2BO14633 110 aa8.79□□□□□ -1
ITGB1-219ENST00000534049 ALDH1A1P00352 501 aa8.79□□□□□ -1
ITGB1-219ENST00000534049 AGERQ15109 404 aa8.79□□□□□ -1
ITGB1-219ENST00000534049 AXIN1O15169 862 aa8.78□□□□□ -1
ITGB1-219ENST00000534049 J3QL48 77 aa8.77□□□□□ -1.01
ITGB1-219ENST00000534049 USP17L8P0C7I0 530 aa8.77□□□□□ -1.01
ITGB1-219ENST00000534049 FKBPLQ9UIM3 349 aa8.77□□□□□ -1.01
ITGB1-219ENST00000534049 PDXDC2PQ6P474 469 aa8.76□□□□□ -1.01
ITGB1-219ENST00000534049 LRRN4Q8WUT4 740 aa8.76□□□□□ -1.01
ITGB1-219ENST00000534049 AAASQ9NRG9 546 aa8.76□□□□□ -1.01
ITGB1-219ENST00000534049 GPSM3Q9Y4H4 160 aa8.76□□□□□ -1.01
ITGB1-219ENST00000534049 APBB1O00213 710 aa8.75□□□□□ -1.01
ITGB1-219ENST00000534049 SOCS7O14512 581 aa8.75□□□□□ -1.01
ITGB1-219ENST00000534049 SH3BP5LQ7L8J4 393 aa8.75□□□□□ -1.01
ITGB1-219ENST00000534049 FOXJ1Q92949 421 aa8.75□□□□□ -1.01
ITGB1-219ENST00000534049 FBXO31Q5XUX0 539 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-219ENST00000534049 SH3RF1Q7Z6J0 888 aa8.74□□□□□ -1.01
ITGB1-219ENST00000534049 BANK1Q8NDB2 785 aa8.74□□□□□ -1.01
ITGB1-219ENST00000534049 CDK15Q96Q40 435 aa8.74□□□□□ -1.01
ITGB1-219ENST00000534049 C1QTNF2Q9BXJ5 285 aa8.74□□□□□ -1.01
ITGB1-219ENST00000534049 ADH1CP00326 375 aa8.73□□□□□ -1.01
ITGB1-219ENST00000534049 TRMT44Q8IYL2 757 aaKnown RBP8.73□□□□□ -1.01
ITGB1-219ENST00000534049 CDV3Q9UKY7 258 aaKnown RBP8.73□□□□□ -1.01
ITGB1-219ENST00000534049 TLL2Q9Y6L7 1015 aa8.73□□□□□ -1.01
ITGB1-219ENST00000534049 ST8SIA5O15466 376 aa8.72□□□□□ -1.01
ITGB1-219ENST00000534049 PRKCSHP14314 528 aaPredicted RBP8.72□□□□□ -1.01
ITGB1-219ENST00000534049 PTK2Q05397 1052 aa8.72□□□□□ -1.01
ITGB1-219ENST00000534049 NR5A1Q13285 461 aa8.72□□□□□ -1.01
ITGB1-219ENST00000534049 NR6A1Q15406 480 aa8.72□□□□□ -1.01
ITGB1-219ENST00000534049 ZNF787Q6DD87 383 aa8.72□□□□□ -1.01
ITGB1-219ENST00000534049 HPS1Q92902 700 aa8.72□□□□□ -1.01
ITGB1-219ENST00000534049 MAP4K5Q9Y4K4 846 aa8.72□□□□□ -1.01
ITGB1-219ENST00000534049 ARHGAP9Q9BRR9 750 aa8.71□□□□□ -1.02
ITGB1-219ENST00000534049 MAGEB6P1A0A0J9YX57 407 aa8.7□□□□□ -1.02
ITGB1-219ENST00000534049 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
ITGB1-219ENST00000534049 NNTQ13423 1086 aa8.69□□□□□ -1.02
ITGB1-219ENST00000534049 ARID5BQ14865 1188 aa8.69□□□□□ -1.02
ITGB1-219ENST00000534049 ZBTB33Q86T24 672 aa8.69□□□□□ -1.02
ITGB1-219ENST00000534049 SENP2Q9HC62 589 aa8.69□□□□□ -1.02
ITGB1-219ENST00000534049 SLC10A4Q96EP9 437 aa8.68□□□□□ -1.02
ITGB1-219ENST00000534049 HMX1Q9NP08 348 aaPredicted RBP8.68□□□□□ -1.02
ITGB1-219ENST00000534049 CAPN5O15484 640 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-219ENST00000534049 ERFEQ4G0M1 354 aa8.67□□□□□ -1.02
ITGB1-219ENST00000534049 VASH1Q7L8A9 365 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-219ENST00000534049 ZNF592Q92610 1267 aa8.67□□□□□ -1.02
ITGB1-219ENST00000534049 KIFC2Q96AC6 838 aa8.67□□□□□ -1.02
ITGB1-219ENST00000534049 CARD14Q9BXL6 1004 aa8.67□□□□□ -1.02
ITGB1-219ENST00000534049 ATP13A2Q9NQ11 1180 aa8.67□□□□□ -1.02
ITGB1-219ENST00000534049 TRIM52Q96A61 297 aa8.66□□□□□ -1.02
ITGB1-219ENST00000534049 NBPF20Q3BBV1 942 aa8.65□□□□□ -1.02
ITGB1-219ENST00000534049 PRM3Q9NNZ6 103 aa8.65□□□□□ -1.02
ITGB1-219ENST00000534049 GRM5P41594 1212 aa8.64□□□□□ -1.03
ITGB1-219ENST00000534049 WDR4P57081 412 aaKnown RBP8.64□□□□□ -1.03
ITGB1-219ENST00000534049 TRIM34Q9BYJ4 488 aa8.64□□□□□ -1.03
ITGB1-219ENST00000534049 FSHRP23945 695 aa8.63□□□□□ -1.03
ITGB1-219ENST00000534049 DHX9Q08211 1270 aaKnown RBP8.63□□□□□ -1.03
ITGB1-219ENST00000534049 EPS8L1Q8TE68 723 aa8.63□□□□□ -1.03
ITGB1-219ENST00000534049 EMILIN1Q9Y6C2 1016 aa8.63□□□□□ -1.03
ITGB1-219ENST00000534049 NDUFB9Q9Y6M9 179 aa8.63□□□□□ -1.03
ITGB1-219ENST00000534049 C11orf95C9JLR9 678 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-219ENST00000534049 TIMP2P16035 220 aa8.62□□□□□ -1.03
ITGB1-219ENST00000534049 CCDC116Q8IYX3 515 aa8.62□□□□□ -1.03
ITGB1-219ENST00000534049 ADAM32Q8TC27 787 aa8.62□□□□□ -1.03
ITGB1-219ENST00000534049 GJD4Q96KN9 370 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-219ENST00000534049 GMPR2Q9P2T1 348 aaKnown RBP8.62□□□□□ -1.03
ITGB1-219ENST00000534049 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-219ENST00000534049 ZBBXA8MT70 800 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms