RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 JMYQ8N9B5 988 aa11.22□□□□□ -0.61
CTNND1-213ENST00000526357 KANK4Q5T7N3 995 aaPredicted RBP11.22□□□□□ -0.61
CTNND1-213ENST00000526357 USP8P40818 1118 aa11.21□□□□□ -0.61
CTNND1-213ENST00000526357 KDM4AO75164 1064 aa11.21□□□□□ -0.61
CTNND1-213ENST00000526357 MINK1Q8N4C8 1332 aaPredicted RBP11.21□□□□□ -0.61
CTNND1-213ENST00000526357 SERPINC1P01008 464 aa11.21□□□□□ -0.62
CTNND1-213ENST00000526357 STK38Q15208 465 aa11.21□□□□□ -0.62
CTNND1-213ENST00000526357 LNPKQ9C0E8 428 aa11.21□□□□□ -0.62
CTNND1-213ENST00000526357 CBFA2T2O43439 604 aa11.2□□□□□ -0.62
CTNND1-213ENST00000526357 NEBLO76041 1014 aa11.2□□□□□ -0.62
CTNND1-213ENST00000526357 RNF214Q8ND24 703 aa11.2□□□□□ -0.62
CTNND1-213ENST00000526357 AIMP1Q12904 312 aaKnown RBP11.2□□□□□ -0.62
CTNND1-213ENST00000526357 GNL3LQ9NVN8 582 aaKnown RBP11.19□□□□□ -0.62
CTNND1-213ENST00000526357 KIF6Q6ZMV9 814 aa11.19□□□□□ -0.62
CTNND1-213ENST00000526357 TAX1BP1Q86VP1 789 aa11.19□□□□□ -0.62
CTNND1-213ENST00000526357 ERC1Q8IUD2 1116 aa11.19□□□□□ -0.62
CTNND1-213ENST00000526357 TANGO6Q9C0B7 1094 aa11.19□□□□□ -0.62
CTNND1-213ENST00000526357 ATP2B1P20020 1258 aa11.19□□□□□ -0.62
CTNND1-213ENST00000526357 CAVIN1Q6NZI2 390 aaKnown RBP11.19□□□□□ -0.62
CTNND1-213ENST00000526357 CLASRPQ8N2M8 674 aaKnown RBP11.19□□□□□ -0.62
CTNND1-213ENST00000526357 CCDC112Q8NEF3 446 aa11.19□□□□□ -0.62
CTNND1-213ENST00000526357 FMNL2Q96PY5 1086 aa11.19□□□□□ -0.62
CTNND1-213ENST00000526357 DNAJC2Q99543 621 aaKnown RBP11.18□□□□□ -0.62
CTNND1-213ENST00000526357 TTC39AQ5SRH9 613 aa11.18□□□□□ -0.62
CTNND1-213ENST00000526357 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.18□□□□□ -0.621e-7■■■□□ 16.3
CTNND1-213ENST00000526357 AEBP1Q8IUX7 1158 aa11.18□□□□□ -0.62
CTNND1-213ENST00000526357 GNAI3P08754 354 aa11.18□□□□□ -0.62
CTNND1-213ENST00000526357 CCDC91Q7Z6B0 441 aa11.18□□□□□ -0.62
CTNND1-213ENST00000526357 CCDC97Q96F63 343 aaPredicted RBP11.18□□□□□ -0.62
CTNND1-213ENST00000526357 TRAK2O60296 914 aa11.17□□□□□ -0.62
CTNND1-213ENST00000526357 PRKRIP1Q9H875 184 aaPredicted RBP11.17□□□□□ -0.62
CTNND1-213ENST00000526357 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
CTNND1-213ENST00000526357 JAKMIP3Q5VZ66 844 aa11.17□□□□□ -0.62
CTNND1-213ENST00000526357 CCDC192P0DO97 292 aa11.17□□□□□ -0.62
CTNND1-213ENST00000526357 NFKBIBQ15653 356 aa11.17□□□□□ -0.62
CTNND1-213ENST00000526357 CCDC158Q5M9N0 1113 aa11.17□□□□□ -0.62
CTNND1-213ENST00000526357 ANKRD1Q15327 319 aa11.17□□□□□ -0.62
CTNND1-213ENST00000526357 CCDC57Q2TAC2 916 aa11.17□□□□□ -0.62
CTNND1-213ENST00000526357 TRIM22Q8IYM9 498 aa11.17□□□□□ -0.62
CTNND1-213ENST00000526357 CCDC30Q5VVM6 783 aa11.16□□□□□ -0.62
CTNND1-213ENST00000526357 NOL7Q9UMY1 257 aaKnown RBP11.16□□□□□ -0.62
CTNND1-213ENST00000526357 SOGA1O94964 1423 aa11.16□□□□□ -0.62
CTNND1-213ENST00000526357 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
CTNND1-213ENST00000526357 DYDC1Q8WWB3 177 aa11.16□□□□□ -0.62
CTNND1-213ENST00000526357 SLC26A8Q96RN1 970 aa11.16□□□□□ -0.62
CTNND1-213ENST00000526357 DNAI2Q9GZS0 605 aa11.16□□□□□ -0.62
CTNND1-213ENST00000526357 USP47Q96K76 1375 aa11.16□□□□□ -0.62
CTNND1-213ENST00000526357 CENPHQ9H3R5 247 aa11.16□□□□□ -0.62
CTNND1-213ENST00000526357 PRPF40AO75400 957 aaKnown RBP11.16□□□□□ -0.62
CTNND1-213ENST00000526357 MIA2Q96PC5 1412 aa11.16□□□□□ -0.62
CTNND1-213ENST00000526357 ZHX3Q9H4I2 956 aa11.16□□□□□ -0.62
CTNND1-213ENST00000526357 CCDC69A6NI79 296 aa11.15□□□□□ -0.62
CTNND1-213ENST00000526357 NACAP1Q9BZK3 213 aa11.15□□□□□ -0.62
CTNND1-213ENST00000526357 BMP2KQ9NSY1 1161 aaPredicted RBP11.15□□□□□ -0.62
CTNND1-213ENST00000526357 SEPT11Q9NVA2 429 aaKnown RBP11.15□□□□□ -0.62
CTNND1-213ENST00000526357 ATF3P18847 181 aa11.15□□□□□ -0.62
CTNND1-213ENST00000526357 SPC24Q8NBT2 197 aa11.15□□□□□ -0.62
CTNND1-213ENST00000526357 LRRCC1Q9C099 1032 aa11.15□□□□□ -0.62
CTNND1-213ENST00000526357 TNMDQ9H2S6 317 aa11.15□□□□□ -0.62
CTNND1-213ENST00000526357 TAF4BQ92750 862 aa11.14□□□□□ -0.63
CTNND1-213ENST00000526357 POTEJP0CG39 1038 aa11.14□□□□□ -0.63
CTNND1-213ENST00000526357 SMARCA2P51531 1590 aa11.14□□□□□ -0.63
CTNND1-213ENST00000526357 STAMBPO95630 424 aa11.14□□□□□ -0.63
CTNND1-213ENST00000526357 SURF6O75683 361 aaKnown RBP11.14□□□□□ -0.63
CTNND1-213ENST00000526357 NEK4P51957 841 aa11.14□□□□□ -0.63
CTNND1-213ENST00000526357 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
CTNND1-213ENST00000526357 NLRP2Q9NX02 1062 aa11.14□□□□□ -0.63
CTNND1-213ENST00000526357 TAF3Q5VWG9 929 aa11.13□□□□□ -0.63
CTNND1-213ENST00000526357 PDS5BQ9NTI5 1447 aa11.13□□□□□ -0.63
CTNND1-213ENST00000526357 MPHOSPH10O00566 681 aaKnown RBP11.13□□□□□ -0.63
CTNND1-213ENST00000526357 FAM193AP78312 1265 aa11.13□□□□□ -0.63
CTNND1-213ENST00000526357 ATP2B2Q01814 1243 aa11.13□□□□□ -0.63
CTNND1-213ENST00000526357 CEBPZQ03701 1054 aaKnown RBP11.13□□□□□ -0.63
CTNND1-213ENST00000526357 CNNM1Q9NRU3 951 aa11.13□□□□□ -0.63
CTNND1-213ENST00000526357 CYP46A1Q9Y6A2 500 aa11.13□□□□□ -0.63
CTNND1-213ENST00000526357 MATR3P43243 847 aaKnown RBP eCLIP11.13□□□□□ -0.636e-7■■■■□ 22.1
CTNND1-213ENST00000526357 CETN2P41208 172 aa11.13□□□□□ -0.63
CTNND1-213ENST00000526357 ZSCAN25Q6NSZ9 544 aa11.13□□□□□ -0.63
CTNND1-213ENST00000526357 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.13□□□□□ -0.63
CTNND1-213ENST00000526357 FIBPO43427 364 aa11.12□□□□□ -0.63
CTNND1-213ENST00000526357 CCDC148Q8NFR7 591 aa11.12□□□□□ -0.63
CTNND1-213ENST00000526357 CDKL5O76039 1030 aa11.12□□□□□ -0.63
CTNND1-213ENST00000526357 HMOX1P09601 288 aa11.12□□□□□ -0.63
CTNND1-213ENST00000526357 PHF23Q9BUL5 403 aaPredicted RBP11.12□□□□□ -0.63
CTNND1-213ENST00000526357 ME1P48163 572 aa11.12□□□□□ -0.63
CTNND1-213ENST00000526357 GIMAP7Q8NHV1 300 aa11.11□□□□□ -0.63
CTNND1-213ENST00000526357 GAS2L2Q8NHY3 880 aa11.11□□□□□ -0.63
CTNND1-213ENST00000526357 GCC1Q96CN9 775 aa11.11□□□□□ -0.63
CTNND1-213ENST00000526357 MAP2K1Q02750 393 aaPredicted RBP11.11□□□□□ -0.63
CTNND1-213ENST00000526357 WDR33Q9C0J8 1336 aaKnown RBP11.11□□□□□ -0.63
CTNND1-213ENST00000526357 LRRFIP2Q9Y608 721 aaKnown RBP11.11□□□□□ -0.63
CTNND1-213ENST00000526357 SMTNL1A8MU46 457 aa11.11□□□□□ -0.63
CTNND1-213ENST00000526357 DHX57Q6P158 1386 aaKnown RBP11.11□□□□□ -0.63
CTNND1-213ENST00000526357 RBM10P98175 930 aaKnown RBP11.1□□□□□ -0.63
CTNND1-213ENST00000526357 ZNF397Q8NF99 534 aaPredicted RBP11.1□□□□□ -0.63
CTNND1-213ENST00000526357 KIAA1328Q86T90 577 aa11.1□□□□□ -0.63
CTNND1-213ENST00000526357 PANK1Q8TE04 598 aa11.1□□□□□ -0.63
CTNND1-213ENST00000526357 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
CTNND1-213ENST00000526357 KRT85P78386 507 aa11.1□□□□□ -0.63
CTNND1-213ENST00000526357 PLEKHO1Q53GL0 409 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms