RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 IRF6O14896 467 aa11.09□□□□□ -0.63
NPM1-212ENST00000524204 MAN1A2O60476 641 aa11.09□□□□□ -0.63
NPM1-212ENST00000524204 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
NPM1-212ENST00000524204 C6orf118Q5T5N4 469 aa11.09□□□□□ -0.63
NPM1-212ENST00000524204 ADAMTS8Q9UP79 889 aa11.09□□□□□ -0.63
NPM1-212ENST00000524204 C6orf229H3BNL8 230 aa11.08□□□□□ -0.64
NPM1-212ENST00000524204 FDX1P10109 184 aa11.08□□□□□ -0.64
NPM1-212ENST00000524204 PTPRNQ16849 979 aa11.08□□□□□ -0.64
NPM1-212ENST00000524204 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
NPM1-212ENST00000524204 ITPKCQ96DU7 683 aa11.06□□□□□ -0.64
NPM1-212ENST00000524204 ZIC2O95409 532 aaPredicted RBP11.05□□□□□ -0.64
NPM1-212ENST00000524204 NUTM1Q86Y26 1132 aa11.05□□□□□ -0.64
NPM1-212ENST00000524204 CNTNAP3BQ96NU0 1288 aa11.04□□□□□ -0.64
NPM1-212ENST00000524204 CNTNAP3Q9BZ76 1288 aa11.04□□□□□ -0.64
NPM1-212ENST00000524204 NR3C2P08235 984 aa11.03□□□□□ -0.64
NPM1-212ENST00000524204 CDK15Q96Q40 435 aa11.02□□□□□ -0.65
NPM1-212ENST00000524204 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
NPM1-212ENST00000524204 DNMT3LQ9UJW3 386 aa11.02□□□□□ -0.65
NPM1-212ENST00000524204 NDUFV2P19404 249 aa11.01□□□□□ -0.65
NPM1-212ENST00000524204 PRR7Q8TB68 274 aa11□□□□□ -0.65
NPM1-212ENST00000524204 FOXJ1Q92949 421 aa11□□□□□ -0.65
NPM1-212ENST00000524204 BMP2P12643 396 aa10.99□□□□□ -0.65
NPM1-212ENST00000524204 ARID5BQ14865 1188 aa10.99□□□□□ -0.65
NPM1-212ENST00000524204 ZNF385CQ66K41 422 aaPredicted RBP10.99□□□□□ -0.65
NPM1-212ENST00000524204 FAM174AQ8TBP5 190 aa10.99□□□□□ -0.65
NPM1-212ENST00000524204 SOS2Q07890 1332 aaPredicted RBP10.99□□□□□ -0.65
NPM1-212ENST00000524204 GRM5P41594 1212 aa10.98□□□□□ -0.65
NPM1-212ENST00000524204 GPAT2Q6NUI2 795 aa10.98□□□□□ -0.65
NPM1-212ENST00000524204 CCDC102AQ96A19 550 aa10.98□□□□□ -0.65
NPM1-212ENST00000524204 MINK1Q8N4C8 1332 aaPredicted RBP10.98□□□□□ -0.65
NPM1-212ENST00000524204 CLCN1P35523 988 aa10.97□□□□□ -0.65
NPM1-212ENST00000524204 LINC00528Q8N1L1 170 aa10.97□□□□□ -0.65
NPM1-212ENST00000524204 SPIRE2Q8WWL2 714 aa10.97□□□□□ -0.65
NPM1-212ENST00000524204 RNF225M0QZC1 329 aaPredicted RBP10.96□□□□□ -0.65
NPM1-212ENST00000524204 WHAMMQ8TF30 809 aa10.96□□□□□ -0.65
NPM1-212ENST00000524204 C4orf48Q5BLP8 95 aa10.95□□□□□ -0.66
NPM1-212ENST00000524204 RNFT1Q5M7Z0 435 aa10.95□□□□□ -0.66
NPM1-212ENST00000524204 MEIOBQ8N635 442 aa10.95□□□□□ -0.66
NPM1-212ENST00000524204 COL25A1Q9BXS0 654 aaPredicted RBP10.95□□□□□ -0.66
NPM1-212ENST00000524204 MOXD2PA6NHM9 499 aa10.94□□□□□ -0.66
NPM1-212ENST00000524204 CTHP32929 405 aa10.93□□□□□ -0.66
NPM1-212ENST00000524204 IRS1P35568 1242 aa10.93□□□□□ -0.66
NPM1-212ENST00000524204 NR5A1Q13285 461 aa10.93□□□□□ -0.66
NPM1-212ENST00000524204 DESI1Q6ICB0 168 aa10.93□□□□□ -0.66
NPM1-212ENST00000524204 DNMT3AQ9Y6K1 912 aaPredicted RBP10.92□□□□□ -0.66
NPM1-212ENST00000524204 ARHGEF15O94989 841 aa10.91□□□□□ -0.66
NPM1-212ENST00000524204 XP32Q5T750 250 aa10.91□□□□□ -0.66
NPM1-212ENST00000524204 UPP2O95045 317 aa10.9□□□□□ -0.66
NPM1-212ENST00000524204 PTSQ03393 145 aa10.9□□□□□ -0.66
NPM1-212ENST00000524204 MTMR2Q13614 643 aa10.9□□□□□ -0.66
NPM1-212ENST00000524204 LYPD8Q6UX82 237 aa10.9□□□□□ -0.66
NPM1-212ENST00000524204 SVOPQ8N4V2 548 aa10.9□□□□□ -0.66
NPM1-212ENST00000524204 MAP10Q9P2G4 905 aa10.9□□□□□ -0.66
NPM1-212ENST00000524204 SSTR3P32745 418 aaPredicted RBP10.88□□□□□ -0.67
NPM1-212ENST00000524204 NANOS1Q8WY41 292 aaKnown RBP10.88□□□□□ -0.67
NPM1-212ENST00000524204 SPTLC1O15269 473 aa10.87□□□□□ -0.67
NPM1-212ENST00000524204 IGHA1P01876 353 aa10.87□□□□□ -0.67
NPM1-212ENST00000524204 F12P00748 615 aaPredicted RBP10.86□□□□□ -0.67
NPM1-212ENST00000524204 SLURP2P0DP57 97 aa10.86□□□□□ -0.67
NPM1-212ENST00000524204 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.86□□□□□ -0.672e-13■□□□□ 10.3
NPM1-212ENST00000524204 SPDYE5A6NIY4 337 aa10.85□□□□□ -0.67
NPM1-212ENST00000524204 FIGNL2A6NMB9 653 aa10.85□□□□□ -0.67
NPM1-212ENST00000524204 TTLL8A6PVC2 850 aa10.85□□□□□ -0.67
NPM1-212ENST00000524204 CFAP99D6REC4 459 aa10.84□□□□□ -0.67
NPM1-212ENST00000524204 CCDC155Q8N6L0 562 aa10.84□□□□□ -0.67
NPM1-212ENST00000524204 KRI1Q8N9T8 703 aaKnown RBP10.84□□□□□ -0.67
NPM1-212ENST00000524204 AGERQ15109 404 aa10.83□□□□□ -0.68
NPM1-212ENST00000524204 TSEN34Q9BSV6 310 aaKnown RBP10.83□□□□□ -0.68
NPM1-212ENST00000524204 PCDHB15Q9Y5E8 787 aa10.82□□□□□ -0.68
NPM1-212ENST00000524204 FSHRP23945 695 aa10.81□□□□□ -0.68
NPM1-212ENST00000524204 VWA5B2Q8N398 1253 aa10.81□□□□□ -0.68
NPM1-212ENST00000524204 MARSP56192 900 aaKnown RBP10.8□□□□□ -0.68
NPM1-212ENST00000524204 KANK3Q6NY19 840 aa10.8□□□□□ -0.68
NPM1-212ENST00000524204 BPHLQ86WA6 291 aaPredicted RBP10.8□□□□□ -0.68
NPM1-212ENST00000524204 SLC35F4A4IF30 521 aa10.79□□□□□ -0.68
NPM1-212ENST00000524204 FOXK2Q01167 660 aa10.79□□□□□ -0.68
NPM1-212ENST00000524204 C1QTNF2Q9BXJ5 285 aa10.79□□□□□ -0.68
NPM1-212ENST00000524204 PER1O15534 1290 aaPredicted RBP10.78□□□□□ -0.68
NPM1-212ENST00000524204 LYPD4Q6UWN0 246 aa10.77□□□□□ -0.69
NPM1-212ENST00000524204 ITGA6P23229 1130 aa10.76□□□□□ -0.69
NPM1-212ENST00000524204 CBLBQ13191 982 aa10.76□□□□□ -0.69
NPM1-212ENST00000524204 SH3RF1Q7Z6J0 888 aa10.76□□□□□ -0.69
NPM1-212ENST00000524204 CDC14CA4D256 554 aa10.75□□□□□ -0.69
NPM1-212ENST00000524204 ADAM23O75077 832 aa10.75□□□□□ -0.69
NPM1-212ENST00000524204 HRCP23327 699 aa10.75□□□□□ -0.69
NPM1-212ENST00000524204 RSBN1LQ6PCB5 846 aaPredicted RBP10.75□□□□□ -0.69
NPM1-212ENST00000524204 VASH1Q7L8A9 365 aaPredicted RBP10.75□□□□□ -0.69
NPM1-212ENST00000524204 SCARF2Q96GP6 870 aaPredicted RBP10.75□□□□□ -0.69
NPM1-212ENST00000524204 EMILIN1Q9Y6C2 1016 aa10.75□□□□□ -0.69
NPM1-212ENST00000524204 SPINT1O43278 529 aa10.74□□□□□ -0.69
NPM1-212ENST00000524204 ITGB2P05107 769 aa10.74□□□□□ -0.69
NPM1-212ENST00000524204 MAP4K5Q9Y4K4 846 aa10.74□□□□□ -0.69
NPM1-212ENST00000524204 SV2AQ7L0J3 742 aa10.73□□□□□ -0.69
NPM1-212ENST00000524204 CCDC116Q8IYX3 515 aa10.73□□□□□ -0.69
NPM1-212ENST00000524204 KRTAP4-8Q9BYQ9 185 aa10.73□□□□□ -0.69
NPM1-212ENST00000524204 TBC1D2Q9BYX2 928 aa10.73□□□□□ -0.69
NPM1-212ENST00000524204 ADAMTS2O95450 1211 aa10.72□□□□□ -0.69
NPM1-212ENST00000524204 Q6ZVU0 165 aa10.72□□□□□ -0.69
NPM1-212ENST00000524204 GJA5P36382 358 aa10.71□□□□□ -0.69
NPM1-212ENST00000524204 PLA2G4EQ3MJ16 856 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms