RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 F12P00748 615 aaPredicted RBP10.55□□□□□ -0.72
CTHRC1-204ENST00000520880 CTHP32929 405 aa10.55□□□□□ -0.72
CTHRC1-204ENST00000520880 CLK2P49760 499 aaKnown RBP10.55□□□□□ -0.72
CTHRC1-204ENST00000520880 NUTM2DQ5VT03 806 aaPredicted RBP10.55□□□□□ -0.72
CTHRC1-204ENST00000520880 NUTM2AQ8IVF1 878 aaPredicted RBP10.55□□□□□ -0.72
CTHRC1-204ENST00000520880 HPS1Q92902 700 aa10.55□□□□□ -0.72
CTHRC1-204ENST00000520880 POLR3EQ9NVU0 708 aa10.55□□□□□ -0.72
CTHRC1-204ENST00000520880 MAP10Q9P2G4 905 aa10.55□□□□□ -0.72
CTHRC1-204ENST00000520880 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
CTHRC1-204ENST00000520880 ZNF511Q8NB15 262 aa10.54□□□□□ -0.72
CTHRC1-204ENST00000520880 TSC1Q92574 1164 aa10.54□□□□□ -0.72
CTHRC1-204ENST00000520880 RSPH6AQ9H0K4 717 aa10.54□□□□□ -0.72
CTHRC1-204ENST00000520880 KDM4CQ9H3R0 1056 aa10.54□□□□□ -0.72
CTHRC1-204ENST00000520880 ZNF775Q96BV0 537 aaPredicted RBP10.53□□□□□ -0.72
CTHRC1-204ENST00000520880 FAM117AQ9C073 453 aa10.51□□□□□ -0.73
CTHRC1-204ENST00000520880 GMPR2Q9P2T1 348 aaKnown RBP10.51□□□□□ -0.73
CTHRC1-204ENST00000520880 TLL2Q9Y6L7 1015 aa10.48□□□□□ -0.73
CTHRC1-204ENST00000520880 VARSP26640 1264 aaKnown RBP10.47□□□□□ -0.73
CTHRC1-204ENST00000520880 HELBQ8NG08 1087 aaPredicted RBP10.47□□□□□ -0.73
CTHRC1-204ENST00000520880 FOXJ1Q92949 421 aa10.47□□□□□ -0.73
CTHRC1-204ENST00000520880 ATP13A2Q9NQ11 1180 aa10.47□□□□□ -0.73
CTHRC1-204ENST00000520880 WASF2Q9Y6W5 498 aa10.47□□□□□ -0.73
CTHRC1-204ENST00000520880 PLEKHG3A1L390 1219 aa10.46□□□□□ -0.73
CTHRC1-204ENST00000520880 SKIV2LQ15477 1246 aaKnown RBP10.46□□□□□ -0.73
CTHRC1-204ENST00000520880 FBXO31Q5XUX0 539 aaPredicted RBP10.46□□□□□ -0.73
CTHRC1-204ENST00000520880 DDRGK1Q96HY6 314 aa10.46□□□□□ -0.73
CTHRC1-204ENST00000520880 C11orf95C9JLR9 678 aaPredicted RBP10.45□□□□□ -0.74
CTHRC1-204ENST00000520880 SH3D19Q5HYK7 790 aa10.45□□□□□ -0.74
CTHRC1-204ENST00000520880 PROCA1Q8NCQ7 364 aaPredicted RBP10.45□□□□□ -0.74
CTHRC1-204ENST00000520880 CTDSPL2Q05D32 466 aa10.43□□□□□ -0.74
CTHRC1-204ENST00000520880 C4orf48Q5BLP8 95 aa10.43□□□□□ -0.74
CTHRC1-204ENST00000520880 MPNDQ8N594 471 aa10.43□□□□□ -0.74
CTHRC1-204ENST00000520880 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.42□□□□□ -0.74
CTHRC1-204ENST00000520880 FAM174AQ8TBP5 190 aa10.41□□□□□ -0.74
CTHRC1-204ENST00000520880 CAPN5O15484 640 aaPredicted RBP10.39□□□□□ -0.75
CTHRC1-204ENST00000520880 SNRPBP14678 240 aaKnown RBP10.39□□□□□ -0.75
CTHRC1-204ENST00000520880 NNTQ13423 1086 aa10.39□□□□□ -0.75
CTHRC1-204ENST00000520880 AGERQ15109 404 aa10.39□□□□□ -0.75
CTHRC1-204ENST00000520880 BMP1P13497 986 aa10.38□□□□□ -0.75
CTHRC1-204ENST00000520880 PPP2R2DQ66LE6 453 aa10.38□□□□□ -0.75
CTHRC1-204ENST00000520880 BPHLQ86WA6 291 aaPredicted RBP10.38□□□□□ -0.75
CTHRC1-204ENST00000520880 ARMC2Q8NEN0 867 aa10.38□□□□□ -0.75
CTHRC1-204ENST00000520880 LRRN4Q8WUT4 740 aa10.38□□□□□ -0.75
CTHRC1-204ENST00000520880 TRIM47Q96LD4 638 aa10.38□□□□□ -0.75
CTHRC1-204ENST00000520880 CDK15Q96Q40 435 aa10.38□□□□□ -0.75
CTHRC1-204ENST00000520880 ATP1B4Q9UN42 357 aaPredicted RBP10.38□□□□□ -0.75
CTHRC1-204ENST00000520880 ADH1CP00326 375 aa10.37□□□□□ -0.75
CTHRC1-204ENST00000520880 ARID5BQ14865 1188 aa10.37□□□□□ -0.75
CTHRC1-204ENST00000520880 SH3RF1Q7Z6J0 888 aa10.37□□□□□ -0.75
CTHRC1-204ENST00000520880 SENP2Q9HC62 589 aa10.37□□□□□ -0.75
CTHRC1-204ENST00000520880 NBPF14Q5TI25 921 aa10.36□□□□□ -0.75
CTHRC1-204ENST00000520880 SH3BP5LQ7L8J4 393 aa10.36□□□□□ -0.75
CTHRC1-204ENST00000520880 TRIM46Q7Z4K8 759 aa10.36□□□□□ -0.75
CTHRC1-204ENST00000520880 NEUROD2Q15784 382 aa10.34□□□□□ -0.75
CTHRC1-204ENST00000520880 C1QTNF2Q9BXJ5 285 aa10.34□□□□□ -0.75
CTHRC1-204ENST00000520880 MAGEB6P1A0A0J9YX57 407 aa10.33□□□□□ -0.76
CTHRC1-204ENST00000520880 TIMP2P16035 220 aa10.33□□□□□ -0.76
CTHRC1-204ENST00000520880 GRM5P41594 1212 aa10.33□□□□□ -0.76
CTHRC1-204ENST00000520880 LCE2AQ5TA79 106 aaPredicted RBP10.33□□□□□ -0.76
CTHRC1-204ENST00000520880 KLF16Q9BXK1 252 aaPredicted RBP10.33□□□□□ -0.76
CTHRC1-204ENST00000520880 AP1G2O75843 785 aa10.32□□□□□ -0.76
CTHRC1-204ENST00000520880 NR3C2P08235 984 aa10.32□□□□□ -0.76
CTHRC1-204ENST00000520880 WDR4P57081 412 aaKnown RBP10.32□□□□□ -0.76
CTHRC1-204ENST00000520880 NR6A1Q15406 480 aa10.32□□□□□ -0.76
CTHRC1-204ENST00000520880 TREML4Q6UXN2 200 aa10.32□□□□□ -0.76
CTHRC1-204ENST00000520880 KIFC2Q96AC6 838 aa10.32□□□□□ -0.76
CTHRC1-204ENST00000520880 GPKOWQ92917 476 aaPredicted RBP eCLIP10.31□□□□□ -0.76
CTHRC1-204ENST00000520880 CARD14Q9BXL6 1004 aa10.31□□□□□ -0.76
CTHRC1-204ENST00000520880 NR5A1Q13285 461 aa10.3□□□□□ -0.76
CTHRC1-204ENST00000520880 FKBPLQ9UIM3 349 aa10.3□□□□□ -0.76
CTHRC1-204ENST00000520880 TRMT44Q8IYL2 757 aaKnown RBP10.29□□□□□ -0.76
CTHRC1-204ENST00000520880 IL27Q8NEV9 243 aa10.29□□□□□ -0.76
CTHRC1-204ENST00000520880 ZFAND3Q9H8U3 227 aa10.29□□□□□ -0.76
CTHRC1-204ENST00000520880 ZIC2O95409 532 aaPredicted RBP10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 USP17L8P0C7I0 530 aa10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 RFC5P40937 340 aa10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 BRPF1P55201 1214 aaPredicted RBP10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 NFX1Q12986 1120 aaKnown RBP10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 ERFEQ4G0M1 354 aa10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 PDXDC2PQ6P474 469 aa10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 EPS8L1Q8TE68 723 aa10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 ITPKCQ96DU7 683 aa10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 ZFP42Q96MM3 310 aa10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 HMX1Q9NP08 348 aaPredicted RBP10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 MAP4K5Q9Y4K4 846 aa10.28□□□□□ -0.76
CTHRC1-204ENST00000520880 FSHRP23945 695 aa10.27□□□□□ -0.77
CTHRC1-204ENST00000520880 MRPL14Q6P1L8 145 aaKnown RBP10.27□□□□□ -0.77
CTHRC1-204ENST00000520880 WFS1O76024 890 aa10.26□□□□□ -0.77
CTHRC1-204ENST00000520880 VASH1Q7L8A9 365 aaPredicted RBP10.26□□□□□ -0.77
CTHRC1-204ENST00000520880 PCMTD1Q96MG8 357 aaPredicted RBP10.25□□□□□ -0.77
CTHRC1-204ENST00000520880 OCSTAMPQ9BR26 566 aa10.25□□□□□ -0.77
CTHRC1-204ENST00000520880 ARHGAP9Q9BRR9 750 aa10.25□□□□□ -0.77
CTHRC1-204ENST00000520880 PURBQ96QR8 312 aaKnown RBP10.24□□□□□ -0.77
CTHRC1-204ENST00000520880 ZC3H4Q9UPT8 1303 aaKnown RBP10.24□□□□□ -0.77
CTHRC1-204ENST00000520880 TERTO14746 1132 aaKnown RBP10.23□□□□□ -0.77
CTHRC1-204ENST00000520880 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
CTHRC1-204ENST00000520880 LCE2CQ5TA81 110 aa10.23□□□□□ -0.77
CTHRC1-204ENST00000520880 SCARF1Q14162 830 aa10.22□□□□□ -0.77
CTHRC1-204ENST00000520880 ZBTB33Q86T24 672 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms