RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 SIAH2O43255 324 aa11.24□□□□□ -0.61
LINC00535-204ENST00000520513 ZNF787Q6DD87 383 aa11.24□□□□□ -0.61
LINC00535-204ENST00000520513 BAP1Q92560 729 aa11.24□□□□□ -0.61
LINC00535-204ENST00000520513 CRIPAKQ8N1N5 446 aa11.23□□□□□ -0.61
LINC00535-204ENST00000520513 PROCA1Q8NCQ7 364 aaPredicted RBP11.22□□□□□ -0.61
LINC00535-204ENST00000520513 NUTM2BA6NNL0 878 aaPredicted RBP11.2□□□□□ -0.62
LINC00535-204ENST00000520513 NUTM2EB1AL46 878 aaPredicted RBP11.2□□□□□ -0.62
LINC00535-204ENST00000520513 CTC1Q2NKJ3 1217 aa11.2□□□□□ -0.62
LINC00535-204ENST00000520513 NUTM2DQ5VT03 806 aaPredicted RBP11.2□□□□□ -0.62
LINC00535-204ENST00000520513 NUTM2AQ8IVF1 878 aaPredicted RBP11.2□□□□□ -0.62
LINC00535-204ENST00000520513 HPS1Q92902 700 aa11.2□□□□□ -0.62
LINC00535-204ENST00000520513 CTHP32929 405 aa11.19□□□□□ -0.62
LINC00535-204ENST00000520513 TSC1Q92574 1164 aa11.19□□□□□ -0.62
LINC00535-204ENST00000520513 RSPH6AQ9H0K4 717 aa11.19□□□□□ -0.62
LINC00535-204ENST00000520513 SMCPP49901 116 aaPredicted RBP11.18□□□□□ -0.62
LINC00535-204ENST00000520513 SH3D19Q5HYK7 790 aa11.18□□□□□ -0.62
LINC00535-204ENST00000520513 ZNF511Q8NB15 262 aa11.18□□□□□ -0.62
LINC00535-204ENST00000520513 SKIV2LQ15477 1246 aaKnown RBP11.17□□□□□ -0.62
LINC00535-204ENST00000520513 EHBP1Q8NDI1 1231 aa11.17□□□□□ -0.62
LINC00535-204ENST00000520513 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00535-204ENST00000520513 FOXJ1Q92949 421 aa11.16□□□□□ -0.62
LINC00535-204ENST00000520513 ALDH1A1P00352 501 aa11.15□□□□□ -0.62
LINC00535-204ENST00000520513 CTDSPL2Q05D32 466 aa11.15□□□□□ -0.62
LINC00535-204ENST00000520513 DDRGK1Q96HY6 314 aa11.15□□□□□ -0.62
LINC00535-204ENST00000520513 TLL2Q9Y6L7 1015 aa11.15□□□□□ -0.62
LINC00535-204ENST00000520513 AXIN1O15169 862 aa11.14□□□□□ -0.63
LINC00535-204ENST00000520513 C4orf48Q5BLP8 95 aa11.14□□□□□ -0.63
LINC00535-204ENST00000520513 LRRN4Q8WUT4 740 aa11.11□□□□□ -0.63
LINC00535-204ENST00000520513 GMPR2Q9P2T1 348 aaKnown RBP11.11□□□□□ -0.63
LINC00535-204ENST00000520513 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
LINC00535-204ENST00000520513 PPP2R2DQ66LE6 453 aa11.1□□□□□ -0.63
LINC00535-204ENST00000520513 ZNF775Q96BV0 537 aaPredicted RBP11.1□□□□□ -0.63
LINC00535-204ENST00000520513 NEUROD2Q15784 382 aa11.09□□□□□ -0.63
LINC00535-204ENST00000520513 HELBQ8NG08 1087 aaPredicted RBP11.09□□□□□ -0.63
LINC00535-204ENST00000520513 VARSP26640 1264 aaKnown RBP11.08□□□□□ -0.64
LINC00535-204ENST00000520513 ATP13A2Q9NQ11 1180 aa11.06□□□□□ -0.64
LINC00535-204ENST00000520513 IL27Q8NEV9 243 aa11.05□□□□□ -0.64
LINC00535-204ENST00000520513 SH3RF1Q7Z6J0 888 aa11.04□□□□□ -0.64
LINC00535-204ENST00000520513 SH3BP5LQ7L8J4 393 aa11.03□□□□□ -0.64
LINC00535-204ENST00000520513 MPNDQ8N594 471 aa11.03□□□□□ -0.64
LINC00535-204ENST00000520513 EPS8L1Q8TE68 723 aa11.03□□□□□ -0.64
LINC00535-204ENST00000520513 HMX1Q9NP08 348 aaPredicted RBP11.03□□□□□ -0.64
LINC00535-204ENST00000520513 WASF2Q9Y6W5 498 aa11.03□□□□□ -0.64
LINC00535-204ENST00000520513 NR6A1Q15406 480 aa11.02□□□□□ -0.65
LINC00535-204ENST00000520513 CDK15Q96Q40 435 aa11.02□□□□□ -0.65
LINC00535-204ENST00000520513 SNRPBP14678 240 aaKnown RBP11.01□□□□□ -0.65
LINC00535-204ENST00000520513 TRIM46Q7Z4K8 759 aa11.01□□□□□ -0.65
LINC00535-204ENST00000520513 FAM174AQ8TBP5 190 aa11.01□□□□□ -0.65
LINC00535-204ENST00000520513 C1QTNF2Q9BXJ5 285 aa11.01□□□□□ -0.65
LINC00535-204ENST00000520513 KLF16Q9BXK1 252 aaPredicted RBP11.01□□□□□ -0.65
LINC00535-204ENST00000520513 AP1G2O75843 785 aa11□□□□□ -0.65
LINC00535-204ENST00000520513 NR3C2P08235 984 aa11□□□□□ -0.65
LINC00535-204ENST00000520513 BMP1P13497 986 aa11□□□□□ -0.65
LINC00535-204ENST00000520513 RFC5P40937 340 aa11□□□□□ -0.65
LINC00535-204ENST00000520513 NNTQ13423 1086 aa11□□□□□ -0.65
LINC00535-204ENST00000520513 C11orf95C9JLR9 678 aaPredicted RBP10.99□□□□□ -0.65
LINC00535-204ENST00000520513 GRM5P41594 1212 aa10.99□□□□□ -0.65
LINC00535-204ENST00000520513 BPHLQ86WA6 291 aaPredicted RBP10.99□□□□□ -0.65
LINC00535-204ENST00000520513 OCSTAMPQ9BR26 566 aa10.99□□□□□ -0.65
LINC00535-204ENST00000520513 ATP1B4Q9UN42 357 aaPredicted RBP10.99□□□□□ -0.65
LINC00535-204ENST00000520513 ADH1CP00326 375 aa10.98□□□□□ -0.65
LINC00535-204ENST00000520513 ARID5BQ14865 1188 aa10.98□□□□□ -0.65
LINC00535-204ENST00000520513 AGERQ15109 404 aa10.98□□□□□ -0.65
LINC00535-204ENST00000520513 SENP2Q9HC62 589 aa10.98□□□□□ -0.65
LINC00535-204ENST00000520513 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
LINC00535-204ENST00000520513 CAPN5O15484 640 aaPredicted RBP10.97□□□□□ -0.65
LINC00535-204ENST00000520513 USP17L8P0C7I0 530 aa10.97□□□□□ -0.65
LINC00535-204ENST00000520513 TIMP2P16035 220 aa10.97□□□□□ -0.65
LINC00535-204ENST00000520513 ARMC2Q8NEN0 867 aa10.97□□□□□ -0.65
LINC00535-204ENST00000520513 NBPF14Q5TI25 921 aa10.96□□□□□ -0.65
LINC00535-204ENST00000520513 MAGEB6P1A0A0J9YX57 407 aa10.95□□□□□ -0.66
LINC00535-204ENST00000520513 LCE2AQ5TA79 106 aaPredicted RBP10.95□□□□□ -0.66
LINC00535-204ENST00000520513 KIFC2Q96AC6 838 aa10.95□□□□□ -0.66
LINC00535-204ENST00000520513 TRIM47Q96LD4 638 aa10.95□□□□□ -0.66
LINC00535-204ENST00000520513 CARD14Q9BXL6 1004 aa10.95□□□□□ -0.66
LINC00535-204ENST00000520513 FKBPLQ9UIM3 349 aa10.95□□□□□ -0.66
LINC00535-204ENST00000520513 ERFEQ4G0M1 354 aa10.94□□□□□ -0.66
LINC00535-204ENST00000520513 TRMT44Q8IYL2 757 aaKnown RBP10.93□□□□□ -0.66
LINC00535-204ENST00000520513 PCMTD1Q96MG8 357 aaPredicted RBP10.93□□□□□ -0.66
LINC00535-204ENST00000520513 TRIM34Q9BYJ4 488 aa10.93□□□□□ -0.66
LINC00535-204ENST00000520513 ZFAND3Q9H8U3 227 aa10.93□□□□□ -0.66
LINC00535-204ENST00000520513 WDR4P57081 412 aaKnown RBP10.92□□□□□ -0.66
LINC00535-204ENST00000520513 PDXDC2PQ6P474 469 aa10.92□□□□□ -0.66
LINC00535-204ENST00000520513 GPKOWQ92917 476 aaPredicted RBP eCLIP10.92□□□□□ -0.66
LINC00535-204ENST00000520513 ITPKCQ96DU7 683 aa10.92□□□□□ -0.66
LINC00535-204ENST00000520513 LCE2CQ5TA81 110 aa10.91□□□□□ -0.66
LINC00535-204ENST00000520513 FSHRP23945 695 aa10.89□□□□□ -0.67
LINC00535-204ENST00000520513 NR5A1Q13285 461 aa10.89□□□□□ -0.67
LINC00535-204ENST00000520513 MAP4K5Q9Y4K4 846 aa10.89□□□□□ -0.67
LINC00535-204ENST00000520513 ZIC2O95409 532 aaPredicted RBP10.88□□□□□ -0.67
LINC00535-204ENST00000520513 TREML4Q6UXN2 200 aa10.88□□□□□ -0.67
LINC00535-204ENST00000520513 GJD4Q96KN9 370 aaPredicted RBP10.88□□□□□ -0.67
LINC00535-204ENST00000520513 ZFP42Q96MM3 310 aa10.88□□□□□ -0.67
LINC00535-204ENST00000520513 ARHGAP9Q9BRR9 750 aa10.88□□□□□ -0.67
LINC00535-204ENST00000520513 NFX1Q12986 1120 aaKnown RBP10.87□□□□□ -0.67
LINC00535-204ENST00000520513 VASH1Q7L8A9 365 aaPredicted RBP10.87□□□□□ -0.67
LINC00535-204ENST00000520513 ZC3H4Q9UPT8 1303 aaKnown RBP10.85□□□□□ -0.67
LINC00535-204ENST00000520513 MRPL14Q6P1L8 145 aaKnown RBP10.85□□□□□ -0.67
LINC00535-204ENST00000520513 TMEM259Q4ZIN3 620 aa10.84□□□□□ -0.67
LINC00535-204ENST00000520513 ADAM32Q8TC27 787 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms