RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 QPCTQ16769 361 aa7.36□□□□□ -1.23
RNU4-49P-201ENST00000516080 ZNF511Q8NB15 262 aa7.36□□□□□ -1.23
RNU4-49P-201ENST00000516080 VARSP26640 1264 aaKnown RBP7.35□□□□□ -1.23
RNU4-49P-201ENST00000516080 LINC01559Q495D7 138 aa7.35□□□□□ -1.23
RNU4-49P-201ENST00000516080 HELBQ8NG08 1087 aaPredicted RBP7.35□□□□□ -1.23
RNU4-49P-201ENST00000516080 TSC1Q92574 1164 aa7.35□□□□□ -1.23
RNU4-49P-201ENST00000516080 HPS1Q92902 700 aa7.35□□□□□ -1.23
RNU4-49P-201ENST00000516080 F12P00748 615 aaPredicted RBP7.34□□□□□ -1.23
RNU4-49P-201ENST00000516080 DDRGK1Q96HY6 314 aa7.34□□□□□ -1.23
RNU4-49P-201ENST00000516080 KDM4CQ9H3R0 1056 aa7.34□□□□□ -1.23
RNU4-49P-201ENST00000516080 POLR3EQ9NVU0 708 aa7.34□□□□□ -1.23
RNU4-49P-201ENST00000516080 DACH1Q9UI36 760 aa7.34□□□□□ -1.23
RNU4-49P-201ENST00000516080 WASF2Q9Y6W5 498 aa7.34□□□□□ -1.23
RNU4-49P-201ENST00000516080 PLEKHG3A1L390 1219 aa7.33□□□□□ -1.24
RNU4-49P-201ENST00000516080 MPNDQ8N594 471 aa7.33□□□□□ -1.24
RNU4-49P-201ENST00000516080 ZNF775Q96BV0 537 aaPredicted RBP7.33□□□□□ -1.24
RNU4-49P-201ENST00000516080 MAP10Q9P2G4 905 aa7.33□□□□□ -1.24
RNU4-49P-201ENST00000516080 C11orf95C9JLR9 678 aaPredicted RBP7.32□□□□□ -1.24
RNU4-49P-201ENST00000516080 PER1O15534 1290 aaPredicted RBP7.32□□□□□ -1.24
RNU4-49P-201ENST00000516080 SKIV2LQ15477 1246 aaKnown RBP7.32□□□□□ -1.24
RNU4-49P-201ENST00000516080 RTL5Q5HYW3 569 aaPredicted RBP7.32□□□□□ -1.24
RNU4-49P-201ENST00000516080 ARMC2Q8NEN0 867 aa7.32□□□□□ -1.24
RNU4-49P-201ENST00000516080 GPBP1L1Q9HC44 474 aaPredicted RBP7.32□□□□□ -1.24
RNU4-49P-201ENST00000516080 FAM174AQ8TBP5 190 aa7.31□□□□□ -1.24
RNU4-49P-201ENST00000516080 SENP2Q9HC62 589 aa7.31□□□□□ -1.24
RNU4-49P-201ENST00000516080 ATP13A2Q9NQ11 1180 aa7.31□□□□□ -1.24
RNU4-49P-201ENST00000516080 GMPR2Q9P2T1 348 aaKnown RBP7.31□□□□□ -1.24
RNU4-49P-201ENST00000516080 SH3D19Q5HYK7 790 aa7.3□□□□□ -1.24
RNU4-49P-201ENST00000516080 FAM117AQ9C073 453 aa7.3□□□□□ -1.24
RNU4-49P-201ENST00000516080 BPHLQ86WA6 291 aaPredicted RBP7.29□□□□□ -1.24
RNU4-49P-201ENST00000516080 AGERQ15109 404 aa7.28□□□□□ -1.24
RNU4-49P-201ENST00000516080 NBPF14Q5TI25 921 aa7.28□□□□□ -1.24
RNU4-49P-201ENST00000516080 FOXJ1Q92949 421 aa7.28□□□□□ -1.24
RNU4-49P-201ENST00000516080 ATP1B4Q9UN42 357 aaPredicted RBP7.28□□□□□ -1.24
RNU4-49P-201ENST00000516080 TLL2Q9Y6L7 1015 aa7.28□□□□□ -1.24
RNU4-49P-201ENST00000516080 CAPN5O15484 640 aaPredicted RBP7.27□□□□□ -1.25
RNU4-49P-201ENST00000516080 KIFC2Q96AC6 838 aa7.27□□□□□ -1.25
RNU4-49P-201ENST00000516080 TRIM47Q96LD4 638 aa7.27□□□□□ -1.25
RNU4-49P-201ENST00000516080 CDK15Q96Q40 435 aa7.27□□□□□ -1.25
RNU4-49P-201ENST00000516080 ADH1CP00326 375 aa7.26□□□□□ -1.25
RNU4-49P-201ENST00000516080 CTDSPL2Q05D32 466 aa7.25□□□□□ -1.25
RNU4-49P-201ENST00000516080 NNTQ13423 1086 aa7.25□□□□□ -1.25
RNU4-49P-201ENST00000516080 PPP2R2DQ66LE6 453 aa7.25□□□□□ -1.25
RNU4-49P-201ENST00000516080 PROCA1Q8NCQ7 364 aaPredicted RBP7.25□□□□□ -1.25
RNU4-49P-201ENST00000516080 GPKOWQ92917 476 aaPredicted RBP eCLIP7.25□□□□□ -1.25
RNU4-49P-201ENST00000516080 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.25□□□□□ -1.25
RNU4-49P-201ENST00000516080 ARID5BQ14865 1188 aa7.24□□□□□ -1.25
RNU4-49P-201ENST00000516080 SNRPBP14678 240 aaKnown RBP7.23□□□□□ -1.25
RNU4-49P-201ENST00000516080 NR5A1Q13285 461 aa7.23□□□□□ -1.25
RNU4-49P-201ENST00000516080 C4orf48Q5BLP8 95 aa7.23□□□□□ -1.25
RNU4-49P-201ENST00000516080 TREML4Q6UXN2 200 aa7.23□□□□□ -1.25
RNU4-49P-201ENST00000516080 SH3BP5LQ7L8J4 393 aa7.22□□□□□ -1.25
RNU4-49P-201ENST00000516080 SH3RF1Q7Z6J0 888 aa7.22□□□□□ -1.25
RNU4-49P-201ENST00000516080 C1QTNF2Q9BXJ5 285 aa7.22□□□□□ -1.25
RNU4-49P-201ENST00000516080 GOPCQ9HD26 462 aa7.22□□□□□ -1.25
RNU4-49P-201ENST00000516080 WDR4P57081 412 aaKnown RBP7.21□□□□□ -1.26
RNU4-49P-201ENST00000516080 TRIM46Q7Z4K8 759 aa7.21□□□□□ -1.26
RNU4-49P-201ENST00000516080 TRMT44Q8IYL2 757 aaKnown RBP7.21□□□□□ -1.26
RNU4-49P-201ENST00000516080 LRRN4Q8WUT4 740 aa7.21□□□□□ -1.26
RNU4-49P-201ENST00000516080 MAP4K5Q9Y4K4 846 aa7.21□□□□□ -1.26
RNU4-49P-201ENST00000516080 ZC3H4Q9UPT8 1303 aaKnown RBP7.21□□□□□ -1.26
RNU4-49P-201ENST00000516080 MAGEB6P1A0A0J9YX57 407 aa7.2□□□□□ -1.26
RNU4-49P-201ENST00000516080 AP1G2O75843 785 aa7.2□□□□□ -1.26
RNU4-49P-201ENST00000516080 BMP1P13497 986 aa7.2□□□□□ -1.26
RNU4-49P-201ENST00000516080 TIMP2P16035 220 aa7.2□□□□□ -1.26
RNU4-49P-201ENST00000516080 GRM5P41594 1212 aa7.2□□□□□ -1.26
RNU4-49P-201ENST00000516080 NEUROD2Q15784 382 aa7.2□□□□□ -1.26
RNU4-49P-201ENST00000516080 PDXDC2PQ6P474 469 aa7.2□□□□□ -1.26
RNU4-49P-201ENST00000516080 PNMA1Q8ND90 353 aa7.2□□□□□ -1.26
RNU4-49P-201ENST00000516080 KLF16Q9BXK1 252 aaPredicted RBP7.2□□□□□ -1.26
RNU4-49P-201ENST00000516080 FKBPLQ9UIM3 349 aa7.2□□□□□ -1.26
RNU4-49P-201ENST00000516080 SCARF1Q14162 830 aa7.19□□□□□ -1.26
RNU4-49P-201ENST00000516080 FBXO31Q5XUX0 539 aaPredicted RBP7.19□□□□□ -1.26
RNU4-49P-201ENST00000516080 PCMTD1Q96MG8 357 aaPredicted RBP7.19□□□□□ -1.26
RNU4-49P-201ENST00000516080 WFS1O76024 890 aa7.18□□□□□ -1.26
RNU4-49P-201ENST00000516080 NR6A1Q15406 480 aa7.18□□□□□ -1.26
RNU4-49P-201ENST00000516080 MRPL14Q6P1L8 145 aaKnown RBP7.18□□□□□ -1.26
RNU4-49P-201ENST00000516080 VASH1Q7L8A9 365 aaPredicted RBP7.18□□□□□ -1.26
RNU4-49P-201ENST00000516080 ARHGAP9Q9BRR9 750 aa7.18□□□□□ -1.26
RNU4-49P-201ENST00000516080 CARD14Q9BXL6 1004 aa7.18□□□□□ -1.26
RNU4-49P-201ENST00000516080 ZIC2O95409 532 aaPredicted RBP7.17□□□□□ -1.26
RNU4-49P-201ENST00000516080 NR3C2P08235 984 aa7.17□□□□□ -1.26
RNU4-49P-201ENST00000516080 ERFEQ4G0M1 354 aa7.17□□□□□ -1.26
RNU4-49P-201ENST00000516080 LCE2AQ5TA79 106 aaPredicted RBP7.17□□□□□ -1.26
RNU4-49P-201ENST00000516080 GPSM3Q9Y4H4 160 aa7.17□□□□□ -1.26
RNU4-49P-201ENST00000516080 TERTO14746 1132 aaKnown RBP7.16□□□□□ -1.26
RNU4-49P-201ENST00000516080 USP17L8P0C7I0 530 aa7.16□□□□□ -1.26
RNU4-49P-201ENST00000516080 FSHRP23945 695 aa7.16□□□□□ -1.26
RNU4-49P-201ENST00000516080 RFC5P40937 340 aa7.16□□□□□ -1.26
RNU4-49P-201ENST00000516080 PTK2Q05397 1052 aa7.16□□□□□ -1.26
RNU4-49P-201ENST00000516080 NFX1Q12986 1120 aaKnown RBP7.16□□□□□ -1.26
RNU4-49P-201ENST00000516080 TMEM259Q4ZIN3 620 aa7.16□□□□□ -1.26
RNU4-49P-201ENST00000516080 ZFP42Q96MM3 310 aa7.16□□□□□ -1.26
RNU4-49P-201ENST00000516080 CDV3Q9UKY7 258 aaKnown RBP7.16□□□□□ -1.26
RNU4-49P-201ENST00000516080 ZBTB33Q86T24 672 aa7.15□□□□□ -1.26
RNU4-49P-201ENST00000516080 IL27Q8NEV9 243 aa7.15□□□□□ -1.26
RNU4-49P-201ENST00000516080 ITPKCQ96DU7 683 aa7.15□□□□□ -1.26
RNU4-49P-201ENST00000516080 SLC10A4Q96EP9 437 aa7.15□□□□□ -1.26
RNU4-49P-201ENST00000516080 ZFAND3Q9H8U3 227 aa7.15□□□□□ -1.26
RNU4-49P-201ENST00000516080 EMILIN1Q9Y6C2 1016 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms