RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ARHGEF28Q8N1W1 1705 aaKnown RBP19.25■□□□□ 0.67
DDX41-204ENST00000504807 NWD2Q9ULI1 1742 aa19.24■□□□□ 0.67
DDX41-204ENST00000504807 TNS3Q68CZ2 1445 aa19.24■□□□□ 0.67
DDX41-204ENST00000504807 MINK1Q8N4C8 1332 aaPredicted RBP19.24■□□□□ 0.67
DDX41-204ENST00000504807 APBA3O96018 575 aa19.23■□□□□ 0.67
DDX41-204ENST00000504807 SPON1Q9HCB6 807 aa19.23■□□□□ 0.67
DDX41-204ENST00000504807 BTG4Q9NY30 223 aa19.23■□□□□ 0.67
DDX41-204ENST00000504807 PHF8Q9UPP1 1060 aa19.23■□□□□ 0.67
DDX41-204ENST00000504807 NINLQ9Y2I6 1382 aa19.22■□□□□ 0.67
DDX41-204ENST00000504807 POGKQ9P215 609 aa19.22■□□□□ 0.67
DDX41-204ENST00000504807 TNS1Q9HBL0 1735 aaKnown RBP19.22■□□□□ 0.67
DDX41-204ENST00000504807 PMFBP1Q8TBY8 1022 aa19.21■□□□□ 0.67
DDX41-204ENST00000504807 ABCA3Q99758 1704 aa19.2■□□□□ 0.66
DDX41-204ENST00000504807 ANKARQ7Z5J8 1434 aa19.2■□□□□ 0.66
DDX41-204ENST00000504807 PSME1Q06323 249 aa19.2■□□□□ 0.66
DDX41-204ENST00000504807 NBPF8Q3BBV2 869 aa19.2■□□□□ 0.66
DDX41-204ENST00000504807 NBPF14Q5TI25 921 aa19.2■□□□□ 0.66
DDX41-204ENST00000504807 TRPM3Q9HCF6 1732 aaPredicted RBP19.2■□□□□ 0.66
DDX41-204ENST00000504807 UTRNP46939 3433 aa19.19■□□□□ 0.66
DDX41-204ENST00000504807 KCNQ2O43526 872 aa19.19■□□□□ 0.66
DDX41-204ENST00000504807 C1QTNF8P60827 252 aa19.19■□□□□ 0.66
DDX41-204ENST00000504807 TULP4Q9NRJ4 1543 aa19.19■□□□□ 0.66
DDX41-204ENST00000504807 NBPF1Q3BBV0 1214 aa19.18■□□□□ 0.66
DDX41-204ENST00000504807 PARD3Q8TEW0 1356 aa19.18■□□□□ 0.66
DDX41-204ENST00000504807 FAM196AQ6ZSG2 479 aa19.17■□□□□ 0.66
DDX41-204ENST00000504807 SPATA31A5Q5VU36 1347 aa19.17■□□□□ 0.66
DDX41-204ENST00000504807 SPATA31A7Q8IWB4 1347 aa19.17■□□□□ 0.66
DDX41-204ENST00000504807 CAMTA1Q9Y6Y1 1673 aa19.17■□□□□ 0.66
DDX41-204ENST00000504807 WASLO00401 505 aaPredicted RBP19.16■□□□□ 0.66
DDX41-204ENST00000504807 ARHGEF10O15013 1369 aa19.16■□□□□ 0.66
DDX41-204ENST00000504807 ATP7BP35670 1465 aa19.16■□□□□ 0.66
DDX41-204ENST00000504807 KIAA1210Q9ULL0 1709 aa19.15■□□□□ 0.66
DDX41-204ENST00000504807 SIN3AQ96ST3 1273 aa19.15■□□□□ 0.66
DDX41-204ENST00000504807 SBNO1A3KN83 1393 aa19.15■□□□□ 0.66
DDX41-204ENST00000504807 ALS2Q96Q42 1657 aa19.14■□□□□ 0.66
DDX41-204ENST00000504807 NRAPQ86VF7 1730 aa19.14■□□□□ 0.66
DDX41-204ENST00000504807 STAC3Q96MF2 364 aa19.14■□□□□ 0.65
DDX41-204ENST00000504807 CRYBG1Q9Y4K1 1723 aa19.11■□□□□ 0.65
DDX41-204ENST00000504807 THSD7AQ9UPZ6 1657 aa19.11■□□□□ 0.65
DDX41-204ENST00000504807 TOPAZ1Q8N9V7 1692 aa19.11■□□□□ 0.65
DDX41-204ENST00000504807 L3MBTL2Q969R5 705 aa19.1■□□□□ 0.65
DDX41-204ENST00000504807 NUP188Q5SRE5 1749 aa19.08■□□□□ 0.65
DDX41-204ENST00000504807 CEP350Q5VT06 3117 aa19.08■□□□□ 0.64
DDX41-204ENST00000504807 RREB1Q92766 1687 aa19.08■□□□□ 0.64
DDX41-204ENST00000504807 NUDT16Q96DE0 195 aaKnown RBP19.07■□□□□ 0.64
DDX41-204ENST00000504807 CDK19Q9BWU1 502 aa19.07■□□□□ 0.64
DDX41-204ENST00000504807 SPATA31A1Q5TZJ5 1347 aa19.05■□□□□ 0.64
DDX41-204ENST00000504807 TRPM1Q7Z4N2 1603 aa19.05■□□□□ 0.64
DDX41-204ENST00000504807 COL14A1Q05707 1796 aaKnown RBP19.05■□□□□ 0.64
DDX41-204ENST00000504807 EIF3AQ14152 1382 aaKnown RBP19.05■□□□□ 0.64
DDX41-204ENST00000504807 PDE3BQ13370 1112 aa19.04■□□□□ 0.64
DDX41-204ENST00000504807 ITSN1Q15811 1721 aa19.04■□□□□ 0.64
DDX41-204ENST00000504807 PRDM11Q9NQV5 511 aa19.04■□□□□ 0.64
DDX41-204ENST00000504807 USP35Q9P2H5 1018 aa19.04■□□□□ 0.64
DDX41-204ENST00000504807 STRN4Q9NRL3 753 aa19.03■□□□□ 0.64
DDX41-204ENST00000504807 QRICH2Q9H0J4 1663 aa19.02■□□□□ 0.64
DDX41-204ENST00000504807 ZBTB7AO95365 584 aa19.02■□□□□ 0.64
DDX41-204ENST00000504807 NEUROD1Q13562 356 aa19.02■□□□□ 0.64
DDX41-204ENST00000504807 GPRASP1Q5JY77 1395 aa19.02■□□□□ 0.64
DDX41-204ENST00000504807 NRKQ7Z2Y5 1582 aa19.02■□□□□ 0.63
DDX41-204ENST00000504807 NGDNQ8NEJ9 315 aaKnown RBP19.01■□□□□ 0.63
DDX41-204ENST00000504807 PDGFDQ9GZP0 370 aaPredicted RBP19.01■□□□□ 0.63
DDX41-204ENST00000504807 POLR3AO14802 1390 aaPredicted RBP19.01■□□□□ 0.63
DDX41-204ENST00000504807 PHRF1Q9P1Y6 1649 aaKnown RBP19■□□□□ 0.63
DDX41-204ENST00000504807 ACEP12821 1306 aa19■□□□□ 0.63
DDX41-204ENST00000504807 CHRNA2Q15822 529 aa18.99■□□□□ 0.63
DDX41-204ENST00000504807 ANO8Q9HCE9 1232 aaPredicted RBP18.99■□□□□ 0.63
DDX41-204ENST00000504807 CABP2Q9NPB3 220 aa18.99■□□□□ 0.63
DDX41-204ENST00000504807 CENPJQ9HC77 1338 aaPredicted RBP18.99■□□□□ 0.63
DDX41-204ENST00000504807 GIGYF1O75420 1035 aaPredicted RBP18.98■□□□□ 0.63
DDX41-204ENST00000504807 PAK3O75914 559 aaPredicted RBP18.98■□□□□ 0.63
DDX41-204ENST00000504807 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
DDX41-204ENST00000504807 PLEKHG3A1L390 1219 aa18.97■□□□□ 0.63
DDX41-204ENST00000504807 FHDC1Q9C0D6 1143 aaPredicted RBP18.97■□□□□ 0.63
DDX41-204ENST00000504807 ATF5Q9Y2D1 282 aaPredicted RBP18.97■□□□□ 0.63
DDX41-204ENST00000504807 PTGER2P43116 358 aa18.96■□□□□ 0.63
DDX41-204ENST00000504807 SYT17Q9BSW7 474 aa18.96■□□□□ 0.63
DDX41-204ENST00000504807 CCDC61Q9Y6R9 512 aa18.96■□□□□ 0.63
DDX41-204ENST00000504807 KIAA0232Q92628 1395 aa18.95■□□□□ 0.62
DDX41-204ENST00000504807 PPIP5K1Q6PFW1 1433 aa18.95■□□□□ 0.62
DDX41-204ENST00000504807 MYOM1P52179 1685 aa18.94■□□□□ 0.62
DDX41-204ENST00000504807 EVA1CP58658 441 aa18.92■□□□□ 0.62
DDX41-204ENST00000504807 SRPK2P78362 688 aaKnown RBP18.92■□□□□ 0.62
DDX41-204ENST00000504807 BARGINQ6ZT62 677 aa18.92■□□□□ 0.62
DDX41-204ENST00000504807 BCL11BQ9C0K0 894 aaPredicted RBP18.92■□□□□ 0.62
DDX41-204ENST00000504807 ZC3H6P61129 1189 aaKnown RBP18.91■□□□□ 0.62
DDX41-204ENST00000504807 ROCK2O75116 1388 aaKnown RBP18.91■□□□□ 0.62
DDX41-204ENST00000504807 CASZ1Q86V15 1759 aa18.9■□□□□ 0.62
DDX41-204ENST00000504807 CABP1Q9NZU7 370 aa18.89■□□□□ 0.61
DDX41-204ENST00000504807 LARP1Q6PKG0 1096 aaKnown RBP18.88■□□□□ 0.61
DDX41-204ENST00000504807 TCP11L2Q8N4U5 519 aa18.88■□□□□ 0.61
DDX41-204ENST00000504807 USP19O94966 1318 aa18.88■□□□□ 0.61
DDX41-204ENST00000504807 SSH2Q76I76 1423 aa18.88■□□□□ 0.61
DDX41-204ENST00000504807 LMO7Q8WWI1 1683 aa18.88■□□□□ 0.61
DDX41-204ENST00000504807 USP6P35125 1406 aa18.87■□□□□ 0.61
DDX41-204ENST00000504807 PIK3C2AO00443 1686 aa18.86■□□□□ 0.61
DDX41-204ENST00000504807 PLSCR1O15162 318 aa18.86■□□□□ 0.61
DDX41-204ENST00000504807 CHD4Q14839 1912 aa18.85■□□□□ 0.61
DDX41-204ENST00000504807 GPR162Q16538 588 aa18.85■□□□□ 0.61
DDX41-204ENST00000504807 PTF1AQ7RTS3 328 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms