RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 EHBP1Q8NDI1 1231 aa7.95□□□□□ -1.14
NF1-213ENST00000489712 MAP10Q9P2G4 905 aa7.95□□□□□ -1.14
NF1-213ENST00000489712 PER1O15534 1290 aaPredicted RBP7.94□□□□□ -1.14
NF1-213ENST00000489712 SH3BP2P78314 561 aa7.94□□□□□ -1.14
NF1-213ENST00000489712 MYT1Q01538 1121 aa7.94□□□□□ -1.14
NF1-213ENST00000489712 ZNF511Q8NB15 262 aa7.94□□□□□ -1.14
NF1-213ENST00000489712 BRPF1P55201 1214 aaPredicted RBP7.93□□□□□ -1.14
NF1-213ENST00000489712 BAP1Q92560 729 aa7.93□□□□□ -1.14
NF1-213ENST00000489712 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.93□□□□□ -1.14
NF1-213ENST00000489712 AVPP01185 164 aa7.91□□□□□ -1.14
NF1-213ENST00000489712 CTC1Q2NKJ3 1217 aa7.91□□□□□ -1.14
NF1-213ENST00000489712 PROCA1Q8NCQ7 364 aaPredicted RBP7.91□□□□□ -1.14
NF1-213ENST00000489712 GOPCQ9HD26 462 aa7.91□□□□□ -1.14
NF1-213ENST00000489712 J3QL48 77 aa7.9□□□□□ -1.14
NF1-213ENST00000489712 SMPD1P17405 629 aa7.9□□□□□ -1.14
NF1-213ENST00000489712 PPP2R2DQ66LE6 453 aa7.9□□□□□ -1.14
NF1-213ENST00000489712 CRIPAKQ8N1N5 446 aa7.9□□□□□ -1.14
NF1-213ENST00000489712 ARMC2Q8NEN0 867 aa7.9□□□□□ -1.14
NF1-213ENST00000489712 PCMTD1Q96MG8 357 aaPredicted RBP7.9□□□□□ -1.14
NF1-213ENST00000489712 ST8SIA5O15466 376 aa7.89□□□□□ -1.15
NF1-213ENST00000489712 ALDH1A1P00352 501 aa7.89□□□□□ -1.15
NF1-213ENST00000489712 NBPF14Q5TI25 921 aa7.89□□□□□ -1.15
NF1-213ENST00000489712 AAASQ9NRG9 546 aa7.89□□□□□ -1.15
NF1-213ENST00000489712 AXIN1O15169 862 aa7.88□□□□□ -1.15
NF1-213ENST00000489712 SIAH2O43255 324 aa7.88□□□□□ -1.15
NF1-213ENST00000489712 VARSP26640 1264 aaKnown RBP7.88□□□□□ -1.15
NF1-213ENST00000489712 IL27Q8NEV9 243 aa7.88□□□□□ -1.15
NF1-213ENST00000489712 AP1G2O75843 785 aa7.87□□□□□ -1.15
NF1-213ENST00000489712 SMCPP49901 116 aaPredicted RBP7.87□□□□□ -1.15
NF1-213ENST00000489712 CTDSPL2Q05D32 466 aa7.87□□□□□ -1.15
NF1-213ENST00000489712 AGERQ15109 404 aa7.87□□□□□ -1.15
NF1-213ENST00000489712 FBXO31Q5XUX0 539 aaPredicted RBP7.87□□□□□ -1.15
NF1-213ENST00000489712 TLL2Q9Y6L7 1015 aa7.87□□□□□ -1.15
NF1-213ENST00000489712 WASF2Q9Y6W5 498 aa7.87□□□□□ -1.15
NF1-213ENST00000489712 BPHLQ86WA6 291 aaPredicted RBP7.86□□□□□ -1.15
NF1-213ENST00000489712 FAM174AQ8TBP5 190 aa7.86□□□□□ -1.15
NF1-213ENST00000489712 LRRN4Q8WUT4 740 aa7.85□□□□□ -1.15
NF1-213ENST00000489712 HPS1Q92902 700 aa7.85□□□□□ -1.15
NF1-213ENST00000489712 GPKOWQ92917 476 aaPredicted RBP eCLIP7.85□□□□□ -1.15
NF1-213ENST00000489712 FOXJ1Q92949 421 aa7.85□□□□□ -1.15
NF1-213ENST00000489712 USP17L8P0C7I0 530 aa7.84□□□□□ -1.15
NF1-213ENST00000489712 RFC5P40937 340 aa7.84□□□□□ -1.15
NF1-213ENST00000489712 ZNF787Q6DD87 383 aa7.84□□□□□ -1.15
NF1-213ENST00000489712 MPNDQ8N594 471 aa7.83□□□□□ -1.16
NF1-213ENST00000489712 ZC3H4Q9UPT8 1303 aaKnown RBP7.82□□□□□ -1.16
NF1-213ENST00000489712 SH3BP5LQ7L8J4 393 aa7.82□□□□□ -1.16
NF1-213ENST00000489712 MAGEB6P1A0A0J9YX57 407 aa7.81□□□□□ -1.16
NF1-213ENST00000489712 ADH1CP00326 375 aa7.81□□□□□ -1.16
NF1-213ENST00000489712 C4orf48Q5BLP8 95 aa7.81□□□□□ -1.16
NF1-213ENST00000489712 SH3RF1Q7Z6J0 888 aa7.81□□□□□ -1.16
NF1-213ENST00000489712 PNMA1Q8ND90 353 aa7.81□□□□□ -1.16
NF1-213ENST00000489712 C1QTNF2Q9BXJ5 285 aa7.81□□□□□ -1.16
NF1-213ENST00000489712 FKBPLQ9UIM3 349 aa7.81□□□□□ -1.16
NF1-213ENST00000489712 NNTQ13423 1086 aa7.8□□□□□ -1.16
NF1-213ENST00000489712 ARID5BQ14865 1188 aa7.8□□□□□ -1.16
NF1-213ENST00000489712 NR6A1Q15406 480 aa7.8□□□□□ -1.16
NF1-213ENST00000489712 TMEM259Q4ZIN3 620 aa7.8□□□□□ -1.16
NF1-213ENST00000489712 CARD14Q9BXL6 1004 aa7.8□□□□□ -1.16
NF1-213ENST00000489712 CDK15Q96Q40 435 aa7.79□□□□□ -1.16
NF1-213ENST00000489712 HMX1Q9NP08 348 aaPredicted RBP7.79□□□□□ -1.16
NF1-213ENST00000489712 ATP13A2Q9NQ11 1180 aa7.79□□□□□ -1.16
NF1-213ENST00000489712 DACH1Q9UI36 760 aa7.79□□□□□ -1.16
NF1-213ENST00000489712 PDXDC2PQ6P474 469 aa7.78□□□□□ -1.16
NF1-213ENST00000489712 TRMT44Q8IYL2 757 aaKnown RBP7.78□□□□□ -1.16
NF1-213ENST00000489712 GMPR2Q9P2T1 348 aaKnown RBP7.78□□□□□ -1.16
NF1-213ENST00000489712 MAP4K5Q9Y4K4 846 aa7.78□□□□□ -1.16
NF1-213ENST00000489712 POTECB2RU33 542 aa7.77□□□□□ -1.17
NF1-213ENST00000489712 CAPN5O15484 640 aaPredicted RBP7.77□□□□□ -1.17
NF1-213ENST00000489712 PRKCSHP14314 528 aaPredicted RBP7.77□□□□□ -1.17
NF1-213ENST00000489712 ARHGAP9Q9BRR9 750 aa7.77□□□□□ -1.17
NF1-213ENST00000489712 FSHRP23945 695 aa7.76□□□□□ -1.17
NF1-213ENST00000489712 NR5A1Q13285 461 aa7.76□□□□□ -1.17
NF1-213ENST00000489712 SLC10A4Q96EP9 437 aa7.76□□□□□ -1.17
NF1-213ENST00000489712 SENP2Q9HC62 589 aa7.76□□□□□ -1.17
NF1-213ENST00000489712 C11orf95C9JLR9 678 aaPredicted RBP7.75□□□□□ -1.17
NF1-213ENST00000489712 WDR4P57081 412 aaKnown RBP7.75□□□□□ -1.17
NF1-213ENST00000489712 PTK2Q05397 1052 aa7.75□□□□□ -1.17
NF1-213ENST00000489712 ERFEQ4G0M1 354 aa7.75□□□□□ -1.17
NF1-213ENST00000489712 VASH1Q7L8A9 365 aaPredicted RBP7.75□□□□□ -1.17
NF1-213ENST00000489712 ZBTB33Q86T24 672 aa7.75□□□□□ -1.17
NF1-213ENST00000489712 GPSM3Q9Y4H4 160 aa7.75□□□□□ -1.17
NF1-213ENST00000489712 EPS8L1Q8TE68 723 aa7.74□□□□□ -1.17
NF1-213ENST00000489712 CDV3Q9UKY7 258 aaKnown RBP7.74□□□□□ -1.17
NF1-213ENST00000489712 BMP1P13497 986 aa7.73□□□□□ -1.17
NF1-213ENST00000489712 TIMP2P16035 220 aa7.73□□□□□ -1.17
NF1-213ENST00000489712 KIFC2Q96AC6 838 aa7.73□□□□□ -1.17
NF1-213ENST00000489712 TRIM47Q96LD4 638 aa7.73□□□□□ -1.17
NF1-213ENST00000489712 TRIM34Q9BYJ4 488 aa7.73□□□□□ -1.17
NF1-213ENST00000489712 NR3C2P08235 984 aa7.72□□□□□ -1.17
NF1-213ENST00000489712 GRM5P41594 1212 aa7.72□□□□□ -1.17
NF1-213ENST00000489712 BANK1Q8NDB2 785 aa7.72□□□□□ -1.17
NF1-213ENST00000489712 APBB1O00213 710 aa7.71□□□□□ -1.18
NF1-213ENST00000489712 SOCS7O14512 581 aa7.71□□□□□ -1.18
NF1-213ENST00000489712 ZIC2O95409 532 aaPredicted RBP7.71□□□□□ -1.18
NF1-213ENST00000489712 TRIM46Q7Z4K8 759 aa7.71□□□□□ -1.18
NF1-213ENST00000489712 ADAM32Q8TC27 787 aa7.71□□□□□ -1.18
NF1-213ENST00000489712 CCDC116Q8IYX3 515 aa7.7□□□□□ -1.18
NF1-213ENST00000489712 KLF16Q9BXK1 252 aaPredicted RBP7.7□□□□□ -1.18
NF1-213ENST00000489712 SNRPBP14678 240 aaKnown RBP7.69□□□□□ -1.18
NF1-213ENST00000489712 NBPF20Q3BBV1 942 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms