RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PDE3BQ13370 1112 aa11.19□□□□□ -0.62
SPTLC1-205ENST00000477888 BARGINQ6ZT62 677 aa11.19□□□□□ -0.62
SPTLC1-205ENST00000477888 PDGFDQ9GZP0 370 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1-205ENST00000477888 PRDM11Q9NQV5 511 aa11.19□□□□□ -0.62
SPTLC1-205ENST00000477888 SYT17Q9BSW7 474 aa11.18□□□□□ -0.62
SPTLC1-205ENST00000477888 FMN2Q9NZ56 1722 aa11.18□□□□□ -0.62
SPTLC1-205ENST00000477888 CAMTA1Q9Y6Y1 1673 aa11.17□□□□□ -0.62
SPTLC1-205ENST00000477888 YTHDC2Q9H6S0 1430 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-205ENST00000477888 PLSCR1O15162 318 aa11.16□□□□□ -0.62
SPTLC1-205ENST00000477888 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-205ENST00000477888 FHDC1Q9C0D6 1143 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-205ENST00000477888 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-205ENST00000477888 STRN4Q9NRL3 753 aa11.16□□□□□ -0.62
SPTLC1-205ENST00000477888 USP35Q9P2H5 1018 aa11.16□□□□□ -0.62
SPTLC1-205ENST00000477888 COL14A1Q05707 1796 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-205ENST00000477888 RREB1Q92766 1687 aa11.15□□□□□ -0.62
SPTLC1-205ENST00000477888 ZBTB7AO95365 584 aa11.15□□□□□ -0.62
SPTLC1-205ENST00000477888 CHRNA2Q15822 529 aa11.15□□□□□ -0.62
SPTLC1-205ENST00000477888 NUP188Q5SRE5 1749 aa11.15□□□□□ -0.63
SPTLC1-205ENST00000477888 ABCA3Q99758 1704 aa11.15□□□□□ -0.63
SPTLC1-205ENST00000477888 ACIN1Q9UKV3 1341 aaKnown RBP11.14□□□□□ -0.63
SPTLC1-205ENST00000477888 RGL3Q3MIN7 710 aa11.14□□□□□ -0.63
SPTLC1-205ENST00000477888 PROM2Q8N271 834 aa11.14□□□□□ -0.63
SPTLC1-205ENST00000477888 ATF5Q9Y2D1 282 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1-205ENST00000477888 GPRASP1Q5JY77 1395 aa11.14□□□□□ -0.63
SPTLC1-205ENST00000477888 KIAA0232Q92628 1395 aa11.14□□□□□ -0.63
SPTLC1-205ENST00000477888 PRAM1Q96QH2 718 aa11.13□□□□□ -0.63
SPTLC1-205ENST00000477888 SGIP1Q9BQI5 828 aa11.13□□□□□ -0.63
SPTLC1-205ENST00000477888 C14orf93Q9H972 538 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-205ENST00000477888 KIF1BO60333 1816 aa11.13□□□□□ -0.63
SPTLC1-205ENST00000477888 ANKRD30BQ9BXX2 1392 aa11.13□□□□□ -0.63
SPTLC1-205ENST00000477888 ANKARQ7Z5J8 1434 aa11.12□□□□□ -0.63
SPTLC1-205ENST00000477888 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-205ENST00000477888 GIGYF1O75420 1035 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-205ENST00000477888 SAFB2Q14151 953 aaKnown RBP eCLIP11.12□□□□□ -0.63
SPTLC1-205ENST00000477888 TCP11L2Q8N4U5 519 aa11.12□□□□□ -0.63
SPTLC1-205ENST00000477888 PIK3C2GO75747 1445 aa11.11□□□□□ -0.63
SPTLC1-205ENST00000477888 EVA1CP58658 441 aa11.11□□□□□ -0.63
SPTLC1-205ENST00000477888 LARP1Q6PKG0 1096 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-205ENST00000477888 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
SPTLC1-205ENST00000477888 PPLO60437 1756 aa11.11□□□□□ -0.63
SPTLC1-205ENST00000477888 PRR36Q9H6K5 1346 aa11.1□□□□□ -0.63
SPTLC1-205ENST00000477888 PAK3O75914 559 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-205ENST00000477888 ZC3H6P61129 1189 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-205ENST00000477888 PTF1AQ7RTS3 328 aa11.1□□□□□ -0.63
SPTLC1-205ENST00000477888 THRAP3Q9Y2W1 955 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-205ENST00000477888 SPATA31E1Q6ZUB1 1445 aa11.09□□□□□ -0.63
SPTLC1-205ENST00000477888 SSH2Q76I76 1423 aa11.09□□□□□ -0.63
SPTLC1-205ENST00000477888 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-205ENST00000477888 TRPM3Q9HCF6 1732 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-205ENST00000477888 DHX57Q6P158 1386 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-205ENST00000477888 CFAP70Q5T0N1 1121 aa11.08□□□□□ -0.64
SPTLC1-205ENST00000477888 NGDNQ8NEJ9 315 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-205ENST00000477888 MTFR1LQ9H019 292 aa11.08□□□□□ -0.64
SPTLC1-205ENST00000477888 KNDC1Q76NI1 1749 aa11.08□□□□□ -0.64
SPTLC1-205ENST00000477888 ALS2Q96Q42 1657 aa11.08□□□□□ -0.64
SPTLC1-205ENST00000477888 SLC15A2Q16348 729 aa11.07□□□□□ -0.64
SPTLC1-205ENST00000477888 HIRIP3Q9BW71 556 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1-205ENST00000477888 POGKQ9P215 609 aa11.07□□□□□ -0.64
SPTLC1-205ENST00000477888 RGPD8O14715 1765 aaPredicted RBP11.07□□□□□ -0.64
SPTLC1-205ENST00000477888 MAP3K5Q99683 1374 aa11.06□□□□□ -0.64
SPTLC1-205ENST00000477888 CASZ1Q86V15 1759 aa11.06□□□□□ -0.64
SPTLC1-205ENST00000477888 ARXQ96QS3 562 aa11.06□□□□□ -0.64
SPTLC1-205ENST00000477888 MYOM1P52179 1685 aa11.05□□□□□ -0.64
SPTLC1-205ENST00000477888 OVOS2A0A0G2JMS6 1433 aa11.05□□□□□ -0.64
SPTLC1-205ENST00000477888 OVOS2A0A0J9YW53 1432 aa11.05□□□□□ -0.64
SPTLC1-205ENST00000477888 WASLO00401 505 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1-205ENST00000477888 GPR162Q16538 588 aa11.05□□□□□ -0.64
SPTLC1-205ENST00000477888 TXNRD1Q16881 649 aa11.05□□□□□ -0.64
SPTLC1-205ENST00000477888 NUTM2GQ5VZR2 741 aa11.05□□□□□ -0.64
SPTLC1-205ENST00000477888 OVOS2Q6IE36 1432 aa11.05□□□□□ -0.64
SPTLC1-205ENST00000477888 STK32BQ9NY57 414 aa11.05□□□□□ -0.64
SPTLC1-205ENST00000477888 GOLGB1Q14789 3259 aaKnown RBP11.04□□□□□ -0.64
SPTLC1-205ENST00000477888 CPDO75976 1380 aa11.03□□□□□ -0.64
SPTLC1-205ENST00000477888 IFT172Q9UG01 1749 aa11.03□□□□□ -0.64
SPTLC1-205ENST00000477888 CRYBG1Q9Y4K1 1723 aa11.03□□□□□ -0.64
SPTLC1-205ENST00000477888 EIF3AQ14152 1382 aaKnown RBP11.03□□□□□ -0.64
SPTLC1-205ENST00000477888 DDB1Q16531 1140 aa11.02□□□□□ -0.65
SPTLC1-205ENST00000477888 MARCH10Q8NA82 808 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-205ENST00000477888 MINK1Q8N4C8 1332 aaPredicted RBP11.02□□□□□ -0.65
SPTLC1-205ENST00000477888 BCL9O00512 1426 aa11.01□□□□□ -0.65
SPTLC1-205ENST00000477888 DLC1Q96QB1 1528 aa11.01□□□□□ -0.65
SPTLC1-205ENST00000477888 TRAK1Q9UPV9 953 aa11.01□□□□□ -0.65
SPTLC1-205ENST00000477888 NUDT16Q96DE0 195 aaKnown RBP11□□□□□ -0.65
SPTLC1-205ENST00000477888 ATP7BP35670 1465 aa11□□□□□ -0.65
SPTLC1-205ENST00000477888 TULP4Q9NRJ4 1543 aa10.99□□□□□ -0.65
SPTLC1-205ENST00000477888 PEAK1Q9H792 1746 aa10.99□□□□□ -0.65
SPTLC1-205ENST00000477888 GCP02774 474 aa10.99□□□□□ -0.65
SPTLC1-205ENST00000477888 HSPA6P17066 643 aa10.99□□□□□ -0.65
SPTLC1-205ENST00000477888 USP19O94966 1318 aa10.99□□□□□ -0.65
SPTLC1-205ENST00000477888 AATKQ6ZMQ8 1374 aa10.99□□□□□ -0.65
SPTLC1-205ENST00000477888 CRB1P82279 1406 aa10.99□□□□□ -0.65
SPTLC1-205ENST00000477888 RGPD3A6NKT7 1758 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-205ENST00000477888 RGPD4Q7Z3J3 1758 aa10.98□□□□□ -0.65
SPTLC1-205ENST00000477888 CHD4Q14839 1912 aa10.98□□□□□ -0.65
SPTLC1-205ENST00000477888 ABTB2Q8N961 1025 aa10.98□□□□□ -0.65
SPTLC1-205ENST00000477888 COL5A2P05997 1499 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-205ENST00000477888 POLR3AO14802 1390 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1-205ENST00000477888 PARP4Q9UKK3 1724 aaKnown RBP10.96□□□□□ -0.65
SPTLC1-205ENST00000477888 ACEP12821 1306 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms