RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 NBPF1Q3BBV0 1214 aa27.34■■□□□ 1.97
USP11-205ENST00000467378 ARHGEF10O15013 1369 aa27.33■■□□□ 1.97
USP11-205ENST00000467378 TNS1Q9HBL0 1735 aaKnown RBP27.33■■□□□ 1.96
USP11-205ENST00000467378 SBNO1A3KN83 1393 aa27.32■■□□□ 1.96
USP11-205ENST00000467378 FAM182BQ5T319 152 aa27.31■■□□□ 1.96
USP11-205ENST00000467378 SIRT1Q96EB6 747 aa27.3■■□□□ 1.96
USP11-205ENST00000467378 BTG4Q9NY30 223 aa27.29■■□□□ 1.96
USP11-205ENST00000467378 COL14A1Q05707 1796 aaKnown RBP27.28■■□□□ 1.96
USP11-205ENST00000467378 DLC1Q96QB1 1528 aa27.28■■□□□ 1.96
USP11-205ENST00000467378 TRAK1Q9UPV9 953 aa27.26■■□□□ 1.95
USP11-205ENST00000467378 ARHGEF28Q8N1W1 1705 aaKnown RBP27.26■■□□□ 1.95
USP11-205ENST00000467378 EZH2Q15910 746 aaKnown RBP27.24■■□□□ 1.95
USP11-205ENST00000467378 DISP2A7MBM2 1401 aa27.24■■□□□ 1.95
USP11-205ENST00000467378 YY1P25490 414 aa27.23■■□□□ 1.95
USP11-205ENST00000467378 PMFBP1Q8TBY8 1022 aa27.22■■□□□ 1.95
USP11-205ENST00000467378 ADGRB2O60241 1585 aa27.22■■□□□ 1.95
USP11-205ENST00000467378 ROCK2O75116 1388 aaKnown RBP27.22■■□□□ 1.95
USP11-205ENST00000467378 TRPM3Q9HCF6 1732 aaPredicted RBP27.21■■□□□ 1.95
USP11-205ENST00000467378 THSD7AQ9UPZ6 1657 aa27.21■■□□□ 1.95
USP11-205ENST00000467378 GPRASP1Q5JY77 1395 aa27.21■■□□□ 1.95
USP11-205ENST00000467378 SAFB2Q14151 953 aaKnown RBP eCLIP27.2■■□□□ 1.94
USP11-205ENST00000467378 PRAM1Q96QH2 718 aa27.19■■□□□ 1.94
USP11-205ENST00000467378 ALS2Q96Q42 1657 aa27.19■■□□□ 1.94
USP11-205ENST00000467378 SPATA31A5Q5VU36 1347 aa27.18■■□□□ 1.94
USP11-205ENST00000467378 SPATA31A7Q8IWB4 1347 aa27.18■■□□□ 1.94
USP11-205ENST00000467378 TRIM37O94972 964 aa27.15■■□□□ 1.94
USP11-205ENST00000467378 CAMKK2Q96RR4 588 aa27.15■■□□□ 1.94
USP11-205ENST00000467378 POGKQ9P215 609 aa27.15■■□□□ 1.94
USP11-205ENST00000467378 CARD11Q9BXL7 1154 aa27.13■■□□□ 1.93
USP11-205ENST00000467378 ANKARQ7Z5J8 1434 aa27.13■■□□□ 1.93
USP11-205ENST00000467378 CRYBG1Q9Y4K1 1723 aa27.13■■□□□ 1.93
USP11-205ENST00000467378 RREB1Q92766 1687 aa27.12■■□□□ 1.93
USP11-205ENST00000467378 APBA3O96018 575 aa27.12■■□□□ 1.93
USP11-205ENST00000467378 FAM196AQ6ZSG2 479 aa27.11■■□□□ 1.93
USP11-205ENST00000467378 NUP188Q5SRE5 1749 aa27.1■■□□□ 1.93
USP11-205ENST00000467378 PRDM11Q9NQV5 511 aa27.09■■□□□ 1.93
USP11-205ENST00000467378 PARD3Q8TEW0 1356 aa27.09■■□□□ 1.93
USP11-205ENST00000467378 QRICH2Q9H0J4 1663 aa27.08■■□□□ 1.92
USP11-205ENST00000467378 DCAF8L1A6NGE4 600 aa27.06■■□□□ 1.92
USP11-205ENST00000467378 PPP1R1BQ9UD71 204 aaPredicted RBP27.06■■□□□ 1.92
USP11-205ENST00000467378 SPATA31A1Q5TZJ5 1347 aa27.06■■□□□ 1.92
USP11-205ENST00000467378 CENPJQ9HC77 1338 aaPredicted RBP27.06■■□□□ 1.92
USP11-205ENST00000467378 NBPF14Q5TI25 921 aa27.05■■□□□ 1.92
USP11-205ENST00000467378 MINK1Q8N4C8 1332 aaPredicted RBP27.05■■□□□ 1.92
USP11-205ENST00000467378 PAK3O75914 559 aaPredicted RBP27.04■■□□□ 1.92
USP11-205ENST00000467378 STRN4Q9NRL3 753 aa27.03■■□□□ 1.92
USP11-205ENST00000467378 EIF3AQ14152 1382 aaKnown RBP27.02■■□□□ 1.92
USP11-205ENST00000467378 HIRIP3Q9BW71 556 aaPredicted RBP27.02■■□□□ 1.92
USP11-205ENST00000467378 CHRNA2Q15822 529 aa27■■□□□ 1.91
USP11-205ENST00000467378 NGDNQ8NEJ9 315 aaKnown RBP27■■□□□ 1.91
USP11-205ENST00000467378 PHRF1Q9P1Y6 1649 aaKnown RBP26.99■■□□□ 1.91
USP11-205ENST00000467378 PDE3BQ13370 1112 aa26.99■■□□□ 1.91
USP11-205ENST00000467378 SPON1Q9HCB6 807 aa26.99■■□□□ 1.91
USP11-205ENST00000467378 USP35Q9P2H5 1018 aa26.99■■□□□ 1.91
USP11-205ENST00000467378 KIAA0232Q92628 1395 aa26.98■■□□□ 1.91
USP11-205ENST00000467378 PRR36Q9H6K5 1346 aa26.98■■□□□ 1.91
USP11-205ENST00000467378 TULP4Q9NRJ4 1543 aa26.97■■□□□ 1.91
USP11-205ENST00000467378 WASLO00401 505 aaPredicted RBP26.97■■□□□ 1.91
USP11-205ENST00000467378 CAMTA1Q9Y6Y1 1673 aa26.96■■□□□ 1.91
USP11-205ENST00000467378 KCNQ2O43526 872 aa26.95■■□□□ 1.9
USP11-205ENST00000467378 NINLQ9Y2I6 1382 aa26.95■■□□□ 1.9
USP11-205ENST00000467378 ITSN1Q15811 1721 aa26.94■■□□□ 1.9
USP11-205ENST00000467378 EVA1CP58658 441 aa26.93■■□□□ 1.9
USP11-205ENST00000467378 ZC3H6P61129 1189 aaKnown RBP26.93■■□□□ 1.9
USP11-205ENST00000467378 CDK19Q9BWU1 502 aa26.93■■□□□ 1.9
USP11-205ENST00000467378 USP47Q96K76 1375 aa26.93■■□□□ 1.9
USP11-205ENST00000467378 ST20-MTHFSA0A0A6YYL1 179 aa26.92■■□□□ 1.9
USP11-205ENST00000467378 SBNO2Q9Y2G9 1366 aa26.92■■□□□ 1.9
USP11-205ENST00000467378 BARGINQ6ZT62 677 aa26.9■■□□□ 1.9
USP11-205ENST00000467378 SSH2Q76I76 1423 aa26.89■■□□□ 1.89
USP11-205ENST00000467378 NUTM2GQ5VZR2 741 aa26.88■■□□□ 1.89
USP11-205ENST00000467378 TESK2Q96S53 571 aa26.88■■□□□ 1.89
USP11-205ENST00000467378 EVC2Q86UK5 1308 aa26.86■■□□□ 1.89
USP11-205ENST00000467378 NUDT16Q96DE0 195 aaKnown RBP26.85■■□□□ 1.89
USP11-205ENST00000467378 ATP7BP35670 1465 aa26.85■■□□□ 1.89
USP11-205ENST00000467378 LARP1Q6PKG0 1096 aaKnown RBP26.84■■□□□ 1.89
USP11-205ENST00000467378 TCP11L2Q8N4U5 519 aa26.84■■□□□ 1.89
USP11-205ENST00000467378 TOPAZ1Q8N9V7 1692 aa26.84■■□□□ 1.89
USP11-205ENST00000467378 PARP4Q9UKK3 1724 aaKnown RBP26.84■■□□□ 1.89
USP11-205ENST00000467378 SRPK2P78362 688 aaKnown RBP26.83■■□□□ 1.89
USP11-205ENST00000467378 CABP2Q9NPB3 220 aa26.83■■□□□ 1.89
USP11-205ENST00000467378 SBF2Q86WG5 1849 aa26.82■■□□□ 1.88
USP11-205ENST00000467378 RGPD3A6NKT7 1758 aaPredicted RBP26.81■■□□□ 1.88
USP11-205ENST00000467378 RGPD4Q7Z3J3 1758 aa26.81■■□□□ 1.88
USP11-205ENST00000467378 NRKQ7Z2Y5 1582 aa26.81■■□□□ 1.88
USP11-205ENST00000467378 EIF4G2P78344 907 aaKnown RBP eCLIP26.81■■□□□ 1.88
USP11-205ENST00000467378 CASZ1Q86V15 1759 aa26.81■■□□□ 1.88
USP11-205ENST00000467378 SLC24A1O60721 1099 aa26.8■■□□□ 1.88
USP11-205ENST00000467378 LMO7Q8WWI1 1683 aa26.79■■□□□ 1.88
USP11-205ENST00000467378 HSPA5P11021 654 aaKnown RBP26.79■■□□□ 1.88
USP11-205ENST00000467378 CCDC61Q9Y6R9 512 aa26.78■■□□□ 1.88
USP11-205ENST00000467378 THRAP3Q9Y2W1 955 aaKnown RBP26.77■■□□□ 1.88
USP11-205ENST00000467378 CHD4Q14839 1912 aa26.77■■□□□ 1.88
USP11-205ENST00000467378 C11orf95C9JLR9 678 aaPredicted RBP26.76■■□□□ 1.87
USP11-205ENST00000467378 ZNF784Q8NCA9 323 aaPredicted RBP26.76■■□□□ 1.87
USP11-205ENST00000467378 MYOM1P52179 1685 aa26.76■■□□□ 1.87
USP11-205ENST00000467378 PEAK1Q9H792 1746 aa26.75■■□□□ 1.87
USP11-205ENST00000467378 PLEKHG3A1L390 1219 aa26.74■■□□□ 1.87
USP11-205ENST00000467378 PUS7Q96PZ0 661 aaKnown RBP26.74■■□□□ 1.87
USP11-205ENST00000467378 OVOS2A0A0G2JMS6 1433 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms