RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 RIC3Q7Z5B4 369 aa11.34□□□□□ -0.59
UBR4-209ENST00000465036 PLEKHG3A1L390 1219 aa11.33□□□□□ -0.6
UBR4-209ENST00000465036 CFAP99D6REC4 459 aa11.32□□□□□ -0.6
UBR4-209ENST00000465036 F12P00748 615 aaPredicted RBP11.31□□□□□ -0.6
UBR4-209ENST00000465036 PDE4DQ08499 809 aa11.31□□□□□ -0.6
UBR4-209ENST00000465036 CAPN5O15484 640 aaPredicted RBP11.3□□□□□ -0.6
UBR4-209ENST00000465036 LINC01559Q495D7 138 aa11.3□□□□□ -0.6
UBR4-209ENST00000465036 WIPF1O43516 503 aa11.29□□□□□ -0.6
UBR4-209ENST00000465036 TERTO14746 1132 aaKnown RBP11.28□□□□□ -0.6
UBR4-209ENST00000465036 CTHP32929 405 aa11.28□□□□□ -0.6
UBR4-209ENST00000465036 MYSM1Q5VVJ2 828 aa11.27□□□□□ -0.61
UBR4-209ENST00000465036 TRIM46Q7Z4K8 759 aa11.26□□□□□ -0.61
UBR4-209ENST00000465036 FAM174AQ8TBP5 190 aa11.26□□□□□ -0.61
UBR4-209ENST00000465036 CDK15Q96Q40 435 aa11.26□□□□□ -0.61
UBR4-209ENST00000465036 LILRB3O75022 631 aa11.25□□□□□ -0.61
UBR4-209ENST00000465036 CABLES1Q8TDN4 633 aa11.25□□□□□ -0.61
UBR4-209ENST00000465036 LIMD1Q9UGP4 676 aa11.25□□□□□ -0.61
UBR4-209ENST00000465036 TLL2Q9Y6L7 1015 aa11.25□□□□□ -0.61
UBR4-209ENST00000465036 NNTQ13423 1086 aa11.23□□□□□ -0.61
UBR4-209ENST00000465036 NPAS3Q8IXF0 933 aa11.23□□□□□ -0.61
UBR4-209ENST00000465036 MAP10Q9P2G4 905 aa11.23□□□□□ -0.61
UBR4-209ENST00000465036 SLC24A3Q9HC58 644 aa11.22□□□□□ -0.61
UBR4-209ENST00000465036 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.61
UBR4-209ENST00000465036 ADH1CP00326 375 aa11.21□□□□□ -0.61
UBR4-209ENST00000465036 BMP1P13497 986 aa11.21□□□□□ -0.61
UBR4-209ENST00000465036 ARMC2Q8NEN0 867 aa11.21□□□□□ -0.61
UBR4-209ENST00000465036 KLF16Q9BXK1 252 aaPredicted RBP11.21□□□□□ -0.61
UBR4-209ENST00000465036 RSPH6AQ9H0K4 717 aa11.21□□□□□ -0.61
UBR4-209ENST00000465036 NUTM2BA6NNL0 878 aaPredicted RBP11.2□□□□□ -0.62
UBR4-209ENST00000465036 NUTM2EB1AL46 878 aaPredicted RBP11.2□□□□□ -0.62
UBR4-209ENST00000465036 QPCTQ16769 361 aa11.2□□□□□ -0.62
UBR4-209ENST00000465036 CSPP1Q1MSJ5 1256 aa11.2□□□□□ -0.62
UBR4-209ENST00000465036 NUTM2DQ5VT03 806 aaPredicted RBP11.2□□□□□ -0.62
UBR4-209ENST00000465036 NUTM2AQ8IVF1 878 aaPredicted RBP11.2□□□□□ -0.62
UBR4-209ENST00000465036 FOXJ1Q92949 421 aa11.2□□□□□ -0.62
UBR4-209ENST00000465036 INSM1Q01101 510 aaPredicted RBP11.19□□□□□ -0.62
UBR4-209ENST00000465036 LCE2CQ5TA81 110 aa11.19□□□□□ -0.62
UBR4-209ENST00000465036 BPHLQ86WA6 291 aaPredicted RBP11.19□□□□□ -0.62
UBR4-209ENST00000465036 NXF1Q9UBU9 619 aaKnown RBP11.19□□□□□ -0.62
UBR4-209ENST00000465036 TIMP2P16035 220 aa11.18□□□□□ -0.62
UBR4-209ENST00000465036 NR5A1Q13285 461 aa11.18□□□□□ -0.62
UBR4-209ENST00000465036 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
UBR4-209ENST00000465036 HELBQ8NG08 1087 aaPredicted RBP11.17□□□□□ -0.62
UBR4-209ENST00000465036 SLC16A10Q8TF71 515 aa11.17□□□□□ -0.62
UBR4-209ENST00000465036 ZFP42Q96MM3 310 aa11.17□□□□□ -0.62
UBR4-209ENST00000465036 STK17AQ9UEE5 414 aa11.17□□□□□ -0.62
UBR4-209ENST00000465036 WDR4P57081 412 aaKnown RBP11.16□□□□□ -0.62
UBR4-209ENST00000465036 C4orf48Q5BLP8 95 aa11.16□□□□□ -0.62
UBR4-209ENST00000465036 MRPL14Q6P1L8 145 aaKnown RBP11.16□□□□□ -0.62
UBR4-209ENST00000465036 C1QTNF2Q9BXJ5 285 aa11.16□□□□□ -0.62
UBR4-209ENST00000465036 SH3RF1Q7Z6J0 888 aa11.15□□□□□ -0.62
UBR4-209ENST00000465036 SCARF1Q14162 830 aa11.14□□□□□ -0.63
UBR4-209ENST00000465036 RTL5Q5HYW3 569 aaPredicted RBP11.14□□□□□ -0.63
UBR4-209ENST00000465036 NBPF14Q5TI25 921 aa11.14□□□□□ -0.63
UBR4-209ENST00000465036 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.638e-15■□□□□ 8.7
UBR4-209ENST00000465036 GRM5P41594 1212 aa11.13□□□□□ -0.63
UBR4-209ENST00000465036 AGERQ15109 404 aa11.13□□□□□ -0.63
UBR4-209ENST00000465036 TSC1Q92574 1164 aa11.13□□□□□ -0.63
UBR4-209ENST00000465036 MAP4K5Q9Y4K4 846 aa11.13□□□□□ -0.63
UBR4-209ENST00000465036 SH3BP5LQ7L8J4 393 aa11.12□□□□□ -0.63
UBR4-209ENST00000465036 TRMT44Q8IYL2 757 aaKnown RBP11.12□□□□□ -0.63
UBR4-209ENST00000465036 H3BM21 787 aa11.1□□□□□ -0.63
UBR4-209ENST00000465036 ARID5BQ14865 1188 aa11.1□□□□□ -0.63
UBR4-209ENST00000465036 IRF7Q92985 503 aa11.1□□□□□ -0.63
UBR4-209ENST00000465036 ZIC2O95409 532 aaPredicted RBP11.09□□□□□ -0.63
UBR4-209ENST00000465036 NR3C2P08235 984 aa11.09□□□□□ -0.63
UBR4-209ENST00000465036 ITPKCQ96DU7 683 aa11.08□□□□□ -0.64
UBR4-209ENST00000465036 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.64
UBR4-209ENST00000465036 SKIV2LQ15477 1246 aaKnown RBP11.07□□□□□ -0.64
UBR4-209ENST00000465036 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
UBR4-209ENST00000465036 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
UBR4-209ENST00000465036 SH3D19Q5HYK7 790 aa11.05□□□□□ -0.64
UBR4-209ENST00000465036 CTDSPL2Q05D32 466 aa11.04□□□□□ -0.64
UBR4-209ENST00000465036 PPP2R2DQ66LE6 453 aa11.04□□□□□ -0.64
UBR4-209ENST00000465036 PDXDC2PQ6P474 469 aa11.04□□□□□ -0.64
UBR4-209ENST00000465036 MEIOBQ8N635 442 aa11.04□□□□□ -0.64
UBR4-209ENST00000465036 GMPRP36959 345 aa11.03□□□□□ -0.64
UBR4-209ENST00000465036 VASH1Q7L8A9 365 aaPredicted RBP11.03□□□□□ -0.64
UBR4-209ENST00000465036 DDRGK1Q96HY6 314 aa11.03□□□□□ -0.64
UBR4-209ENST00000465036 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
UBR4-209ENST00000465036 EMILIN1Q9Y6C2 1016 aa11.03□□□□□ -0.64
UBR4-209ENST00000465036 ZC3H4Q9UPT8 1303 aaKnown RBP11.03□□□□□ -0.64
UBR4-209ENST00000465036 UPP2O95045 317 aa11.01□□□□□ -0.65
UBR4-209ENST00000465036 VSIG8P0DPA2 414 aa11.01□□□□□ -0.65
UBR4-209ENST00000465036 FSHRP23945 695 aa11.01□□□□□ -0.65
UBR4-209ENST00000465036 ERFEQ4G0M1 354 aa11.01□□□□□ -0.65
UBR4-209ENST00000465036 KDM4CQ9H3R0 1056 aa11.01□□□□□ -0.65
UBR4-209ENST00000465036 FKBPLQ9UIM3 349 aa11.01□□□□□ -0.65
UBR4-209ENST00000465036 CDV3Q9UKY7 258 aaKnown RBP11.01□□□□□ -0.65
UBR4-209ENST00000465036 MAGEB6P1A0A0J9YX57 407 aa11□□□□□ -0.65
UBR4-209ENST00000465036 FAM181BA6NEQ2 426 aa10.99□□□□□ -0.65
UBR4-209ENST00000465036 LORP23490 312 aaPredicted RBP10.99□□□□□ -0.65
UBR4-209ENST00000465036 CCDC116Q8IYX3 515 aa10.99□□□□□ -0.65
UBR4-209ENST00000465036 LINC00528Q8N1L1 170 aa10.99□□□□□ -0.65
UBR4-209ENST00000465036 TSEN34Q9BSV6 310 aaKnown RBP10.99□□□□□ -0.65
UBR4-209ENST00000465036 ERBB4Q15303 1308 aa10.99□□□□□ -0.65
UBR4-209ENST00000465036 VEGFBP49765 207 aa10.98□□□□□ -0.65
UBR4-209ENST00000465036 MAN1A2O60476 641 aa10.97□□□□□ -0.65
UBR4-209ENST00000465036 BMP2P12643 396 aa10.97□□□□□ -0.65
UBR4-209ENST00000465036 LRRN4Q8WUT4 740 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms