RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 POLR3EQ9NVU0 708 aa10.24□□□□□ -0.77
ITGB1-208ENST00000464001 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
ITGB1-208ENST00000464001 DDRGK1Q96HY6 314 aa10.23□□□□□ -0.77
ITGB1-208ENST00000464001 ALDH1A1P00352 501 aa10.22□□□□□ -0.77
ITGB1-208ENST00000464001 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
ITGB1-208ENST00000464001 SIAH2O43255 324 aa10.21□□□□□ -0.77
ITGB1-208ENST00000464001 ZNF511Q8NB15 262 aa10.21□□□□□ -0.77
ITGB1-208ENST00000464001 HELBQ8NG08 1087 aaPredicted RBP10.21□□□□□ -0.77
ITGB1-208ENST00000464001 F12P00748 615 aaPredicted RBP10.2□□□□□ -0.78
ITGB1-208ENST00000464001 VARSP26640 1264 aaKnown RBP10.19□□□□□ -0.78
ITGB1-208ENST00000464001 SKIV2LQ15477 1246 aaKnown RBP10.19□□□□□ -0.78
ITGB1-208ENST00000464001 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
ITGB1-208ENST00000464001 FAM117AQ9C073 453 aa10.19□□□□□ -0.78
ITGB1-208ENST00000464001 MAP10Q9P2G4 905 aa10.19□□□□□ -0.78
ITGB1-208ENST00000464001 POTECB2RU33 542 aa10.18□□□□□ -0.78
ITGB1-208ENST00000464001 PER1O15534 1290 aaPredicted RBP10.18□□□□□ -0.78
ITGB1-208ENST00000464001 SH3D19Q5HYK7 790 aa10.18□□□□□ -0.78
ITGB1-208ENST00000464001 HPS1Q92902 700 aa10.18□□□□□ -0.78
ITGB1-208ENST00000464001 ATP1B4Q9UN42 357 aaPredicted RBP10.18□□□□□ -0.78
ITGB1-208ENST00000464001 WASF2Q9Y6W5 498 aa10.18□□□□□ -0.78
ITGB1-208ENST00000464001 DACH1Q9UI36 760 aa10.17□□□□□ -0.78
ITGB1-208ENST00000464001 PLEKHG3A1L390 1219 aa10.16□□□□□ -0.78
ITGB1-208ENST00000464001 ARMC2Q8NEN0 867 aa10.16□□□□□ -0.78
ITGB1-208ENST00000464001 MPNDQ8N594 471 aa10.14□□□□□ -0.79
ITGB1-208ENST00000464001 FAM174AQ8TBP5 190 aa10.14□□□□□ -0.79
ITGB1-208ENST00000464001 ZNF775Q96BV0 537 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-208ENST00000464001 GMPR2Q9P2T1 348 aaKnown RBP10.13□□□□□ -0.79
ITGB1-208ENST00000464001 AGERQ15109 404 aa10.12□□□□□ -0.79
ITGB1-208ENST00000464001 FOXJ1Q92949 421 aa10.12□□□□□ -0.79
ITGB1-208ENST00000464001 ATP13A2Q9NQ11 1180 aa10.12□□□□□ -0.79
ITGB1-208ENST00000464001 C11orf95C9JLR9 678 aaPredicted RBP10.11□□□□□ -0.79
ITGB1-208ENST00000464001 BPHLQ86WA6 291 aaPredicted RBP10.11□□□□□ -0.79
ITGB1-208ENST00000464001 PROCA1Q8NCQ7 364 aaPredicted RBP10.11□□□□□ -0.79
ITGB1-208ENST00000464001 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.11□□□□□ -0.79
ITGB1-208ENST00000464001 TLL2Q9Y6L7 1015 aa10.11□□□□□ -0.79
ITGB1-208ENST00000464001 CTDSPL2Q05D32 466 aa10.1□□□□□ -0.79
ITGB1-208ENST00000464001 NBPF14Q5TI25 921 aa10.1□□□□□ -0.79
ITGB1-208ENST00000464001 SENP2Q9HC62 589 aa10.1□□□□□ -0.79
ITGB1-208ENST00000464001 PPP2R2DQ66LE6 453 aa10.09□□□□□ -0.79
ITGB1-208ENST00000464001 CAPN5O15484 640 aaPredicted RBP10.08□□□□□ -0.8
ITGB1-208ENST00000464001 NEUROD2Q15784 382 aa10.08□□□□□ -0.8
ITGB1-208ENST00000464001 GPKOWQ92917 476 aaPredicted RBP eCLIP10.07□□□□□ -0.8
ITGB1-208ENST00000464001 CDK15Q96Q40 435 aa10.07□□□□□ -0.8
ITGB1-208ENST00000464001 NNTQ13423 1086 aa10.06□□□□□ -0.8
ITGB1-208ENST00000464001 ARID5BQ14865 1188 aa10.06□□□□□ -0.8
ITGB1-208ENST00000464001 KIFC2Q96AC6 838 aa10.06□□□□□ -0.8
ITGB1-208ENST00000464001 ADH1CP00326 375 aa10.05□□□□□ -0.8
ITGB1-208ENST00000464001 C4orf48Q5BLP8 95 aa10.05□□□□□ -0.8
ITGB1-208ENST00000464001 AP1G2O75843 785 aa10.04□□□□□ -0.8
ITGB1-208ENST00000464001 LRRN4Q8WUT4 740 aa10.04□□□□□ -0.8
ITGB1-208ENST00000464001 TRIM47Q96LD4 638 aa10.04□□□□□ -0.8
ITGB1-208ENST00000464001 GOPCQ9HD26 462 aa10.04□□□□□ -0.8
ITGB1-208ENST00000464001 FBXO31Q5XUX0 539 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-208ENST00000464001 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
ITGB1-208ENST00000464001 PCMTD1Q96MG8 357 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-208ENST00000464001 NR5A1Q13285 461 aa10.02□□□□□ -0.81
ITGB1-208ENST00000464001 SH3BP5LQ7L8J4 393 aa10.02□□□□□ -0.81
ITGB1-208ENST00000464001 MAGEB6P1A0A0J9YX57 407 aa10.01□□□□□ -0.81
ITGB1-208ENST00000464001 WDR4P57081 412 aaKnown RBP10.01□□□□□ -0.81
ITGB1-208ENST00000464001 IL27Q8NEV9 243 aa10.01□□□□□ -0.81
ITGB1-208ENST00000464001 C1QTNF2Q9BXJ5 285 aa10.01□□□□□ -0.81
ITGB1-208ENST00000464001 FKBPLQ9UIM3 349 aa10.01□□□□□ -0.81
ITGB1-208ENST00000464001 SNRPBP14678 240 aaKnown RBP10□□□□□ -0.81
ITGB1-208ENST00000464001 PDXDC2PQ6P474 469 aa10□□□□□ -0.81
ITGB1-208ENST00000464001 BMP1P13497 986 aa9.99□□□□□ -0.81
ITGB1-208ENST00000464001 RFC5P40937 340 aa9.99□□□□□ -0.81
ITGB1-208ENST00000464001 NR6A1Q15406 480 aa9.99□□□□□ -0.81
ITGB1-208ENST00000464001 TRMT44Q8IYL2 757 aaKnown RBP9.99□□□□□ -0.81
ITGB1-208ENST00000464001 PNMA1Q8ND90 353 aa9.99□□□□□ -0.81
ITGB1-208ENST00000464001 MAP4K5Q9Y4K4 846 aa9.99□□□□□ -0.81
ITGB1-208ENST00000464001 ZC3H4Q9UPT8 1303 aaKnown RBP9.99□□□□□ -0.81
ITGB1-208ENST00000464001 TIMP2P16035 220 aa9.98□□□□□ -0.81
ITGB1-208ENST00000464001 GRM5P41594 1212 aa9.98□□□□□ -0.81
ITGB1-208ENST00000464001 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
ITGB1-208ENST00000464001 TPRNQ4KMQ1 711 aa9.98□□□□□ -0.81
ITGB1-208ENST00000464001 VASH1Q7L8A9 365 aaPredicted RBP9.98□□□□□ -0.81
ITGB1-208ENST00000464001 TRIM46Q7Z4K8 759 aa9.98□□□□□ -0.81
ITGB1-208ENST00000464001 ARHGAP9Q9BRR9 750 aa9.98□□□□□ -0.81
ITGB1-208ENST00000464001 CARD14Q9BXL6 1004 aa9.98□□□□□ -0.81
ITGB1-208ENST00000464001 USP17L8P0C7I0 530 aa9.97□□□□□ -0.81
ITGB1-208ENST00000464001 TREML4Q6UXN2 200 aa9.97□□□□□ -0.81
ITGB1-208ENST00000464001 KLF16Q9BXK1 252 aaPredicted RBP9.97□□□□□ -0.81
ITGB1-208ENST00000464001 ZIC2O95409 532 aaPredicted RBP9.96□□□□□ -0.82
ITGB1-208ENST00000464001 SCARF1Q14162 830 aa9.96□□□□□ -0.82
ITGB1-208ENST00000464001 ERFEQ4G0M1 354 aa9.96□□□□□ -0.82
ITGB1-208ENST00000464001 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.82
ITGB1-208ENST00000464001 NR3C2P08235 984 aa9.95□□□□□ -0.82
ITGB1-208ENST00000464001 PTK2Q05397 1052 aa9.95□□□□□ -0.82
ITGB1-208ENST00000464001 MRPL14Q6P1L8 145 aaKnown RBP9.95□□□□□ -0.82
ITGB1-208ENST00000464001 ZBTB33Q86T24 672 aa9.95□□□□□ -0.82
ITGB1-208ENST00000464001 CDV3Q9UKY7 258 aaKnown RBP9.94□□□□□ -0.82
ITGB1-208ENST00000464001 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
ITGB1-208ENST00000464001 WFS1O76024 890 aa9.93□□□□□ -0.82
ITGB1-208ENST00000464001 FSHRP23945 695 aa9.93□□□□□ -0.82
ITGB1-208ENST00000464001 ITPKCQ96DU7 683 aa9.93□□□□□ -0.82
ITGB1-208ENST00000464001 ZFP42Q96MM3 310 aa9.93□□□□□ -0.82
ITGB1-208ENST00000464001 ZFAND3Q9H8U3 227 aa9.93□□□□□ -0.82
ITGB1-208ENST00000464001 SLC10A4Q96EP9 437 aa9.92□□□□□ -0.82
ITGB1-208ENST00000464001 HMX1Q9NP08 348 aaPredicted RBP9.92□□□□□ -0.82
ITGB1-208ENST00000464001 CCDC116Q8IYX3 515 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms