RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 DACH1Q9UI36 760 aa11.17□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 AXIN1O15169 862 aa11.16□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 PER1O15534 1290 aaPredicted RBP11.16□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 SIAH2O43255 324 aa11.16□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 TSC1Q92574 1164 aa11.16□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 F12P00748 615 aaPredicted RBP11.15□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 SMCPP49901 116 aaPredicted RBP11.15□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 CTC1Q2NKJ3 1217 aa11.15□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 FAM117AQ9C073 453 aa11.15□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 MAP10Q9P2G4 905 aa11.15□□□□□ -0.62
PCDH9-AS4-201ENST00000456459 ZNF511Q8NB15 262 aa11.14□□□□□ -0.63
PCDH9-AS4-201ENST00000456459 HPS1Q92902 700 aa11.14□□□□□ -0.63
PCDH9-AS4-201ENST00000456459 ALDH1A1P00352 501 aa11.13□□□□□ -0.63
PCDH9-AS4-201ENST00000456459 PLEKHG3A1L390 1219 aa11.11□□□□□ -0.63
PCDH9-AS4-201ENST00000456459 SKIV2LQ15477 1246 aaKnown RBP11.1□□□□□ -0.63
PCDH9-AS4-201ENST00000456459 DDRGK1Q96HY6 314 aa11.1□□□□□ -0.63
PCDH9-AS4-201ENST00000456459 SH3D19Q5HYK7 790 aa11.09□□□□□ -0.63
PCDH9-AS4-201ENST00000456459 FBXO31Q5XUX0 539 aaPredicted RBP11.09□□□□□ -0.63
PCDH9-AS4-201ENST00000456459 VARSP26640 1264 aaKnown RBP11.08□□□□□ -0.64
PCDH9-AS4-201ENST00000456459 PROCA1Q8NCQ7 364 aaPredicted RBP11.08□□□□□ -0.64
PCDH9-AS4-201ENST00000456459 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
PCDH9-AS4-201ENST00000456459 ZNF775Q96BV0 537 aaPredicted RBP11.08□□□□□ -0.64
PCDH9-AS4-201ENST00000456459 GMPR2Q9P2T1 348 aaKnown RBP11.08□□□□□ -0.64
PCDH9-AS4-201ENST00000456459 FOXJ1Q92949 421 aa11.07□□□□□ -0.64
PCDH9-AS4-201ENST00000456459 TLL2Q9Y6L7 1015 aa11.07□□□□□ -0.64
PCDH9-AS4-201ENST00000456459 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.06□□□□□ -0.64
PCDH9-AS4-201ENST00000456459 CTDSPL2Q05D32 466 aa11.05□□□□□ -0.64
PCDH9-AS4-201ENST00000456459 WASF2Q9Y6W5 498 aa11.05□□□□□ -0.64
PCDH9-AS4-201ENST00000456459 ATP13A2Q9NQ11 1180 aa11.04□□□□□ -0.64
PCDH9-AS4-201ENST00000456459 C4orf48Q5BLP8 95 aa11.02□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 MPNDQ8N594 471 aa11.02□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 ATP1B4Q9UN42 357 aaPredicted RBP11.02□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 PPP2R2DQ66LE6 453 aa11.01□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 FAM174AQ8TBP5 190 aa11.01□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 C11orf95C9JLR9 678 aaPredicted RBP11□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 ARMC2Q8NEN0 867 aa11□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 AGERQ15109 404 aa10.99□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 NEUROD2Q15784 382 aa10.99□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 BPHLQ86WA6 291 aaPredicted RBP10.99□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 LRRN4Q8WUT4 740 aa10.99□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 CAPN5O15484 640 aaPredicted RBP10.97□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 NNTQ13423 1086 aa10.97□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 CDK15Q96Q40 435 aa10.97□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 ARID5BQ14865 1188 aa10.96□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 NBPF14Q5TI25 921 aa10.96□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 SH3BP5LQ7L8J4 393 aa10.96□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 SH3RF1Q7Z6J0 888 aa10.96□□□□□ -0.65
PCDH9-AS4-201ENST00000456459 ADH1CP00326 375 aa10.95□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 SNRPBP14678 240 aaKnown RBP10.95□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 AP1G2O75843 785 aa10.94□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 BMP1P13497 986 aa10.94□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 IL27Q8NEV9 243 aa10.94□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 TRIM47Q96LD4 638 aa10.94□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 C1QTNF2Q9BXJ5 285 aa10.94□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 SENP2Q9HC62 589 aa10.94□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 BRPF1P55201 1214 aaPredicted RBP10.93□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 NR6A1Q15406 480 aa10.93□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 TRIM46Q7Z4K8 759 aa10.93□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 GRM5P41594 1212 aa10.92□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 GPKOWQ92917 476 aaPredicted RBP eCLIP10.92□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 MAGEB6P1A0A0J9YX57 407 aa10.91□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 TIMP2P16035 220 aa10.91□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 KLF16Q9BXK1 252 aaPredicted RBP10.91□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 FKBPLQ9UIM3 349 aa10.91□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 NR3C2P08235 984 aa10.9□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 RFC5P40937 340 aa10.9□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 WDR4P57081 412 aaKnown RBP10.9□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 KIFC2Q96AC6 838 aa10.9□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 CARD14Q9BXL6 1004 aa10.9□□□□□ -0.66
PCDH9-AS4-201ENST00000456459 NR5A1Q13285 461 aa10.89□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 TRMT44Q8IYL2 757 aaKnown RBP10.89□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 EPS8L1Q8TE68 723 aa10.89□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 PCMTD1Q96MG8 357 aaPredicted RBP10.89□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 USP17L8P0C7I0 530 aa10.88□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 PDXDC2PQ6P474 469 aa10.88□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 HMX1Q9NP08 348 aaPredicted RBP10.88□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 ERFEQ4G0M1 354 aa10.87□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 TREML4Q6UXN2 200 aa10.87□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 MAP4K5Q9Y4K4 846 aa10.87□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 LCE2AQ5TA79 106 aaPredicted RBP10.86□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 VASH1Q7L8A9 365 aaPredicted RBP10.86□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 ARHGAP9Q9BRR9 750 aa10.86□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 ZFAND3Q9H8U3 227 aa10.86□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 ZIC2O95409 532 aaPredicted RBP10.85□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 FSHRP23945 695 aa10.85□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 ITPKCQ96DU7 683 aa10.85□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 ZC3H4Q9UPT8 1303 aaKnown RBP10.84□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 MRPL14Q6P1L8 145 aaKnown RBP10.84□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 ZFP42Q96MM3 310 aa10.84□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 OCSTAMPQ9BR26 566 aa10.84□□□□□ -0.67
PCDH9-AS4-201ENST00000456459 NFX1Q12986 1120 aaKnown RBP10.82□□□□□ -0.68
PCDH9-AS4-201ENST00000456459 TMEM259Q4ZIN3 620 aa10.81□□□□□ -0.68
PCDH9-AS4-201ENST00000456459 ZBTB33Q86T24 672 aa10.81□□□□□ -0.68
PCDH9-AS4-201ENST00000456459 PURBQ96QR8 312 aaKnown RBP10.81□□□□□ -0.68
PCDH9-AS4-201ENST00000456459 WFS1O76024 890 aa10.8□□□□□ -0.68
PCDH9-AS4-201ENST00000456459 PTK2Q05397 1052 aa10.8□□□□□ -0.68
PCDH9-AS4-201ENST00000456459 SCARF1Q14162 830 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms