RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 MEX3CQ5U5Q3 659 aaKnown RBP13.63□□□□□ -0.23
SEC16A-206ENST00000431893 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
SEC16A-206ENST00000431893 ATP2B2Q01814 1243 aa13.63□□□□□ -0.23
SEC16A-206ENST00000431893 SURF6O75683 361 aaKnown RBP13.63□□□□□ -0.23
SEC16A-206ENST00000431893 MYO6Q9UM54 1294 aa13.63□□□□□ -0.23
SEC16A-206ENST00000431893 LETM1O95202 739 aaPredicted RBP13.63□□□□□ -0.23
SEC16A-206ENST00000431893 XBP1P17861 261 aa13.63□□□□□ -0.23
SEC16A-206ENST00000431893 STK38Q15208 465 aa13.63□□□□□ -0.23
SEC16A-206ENST00000431893 SYCP1Q15431 976 aa13.63□□□□□ -0.23
SEC16A-206ENST00000431893 CCDC181Q5TID7 509 aa13.63□□□□□ -0.23
SEC16A-206ENST00000431893 KIAA0754O94854 1291 aa13.62□□□□□ -0.23
SEC16A-206ENST00000431893 SIL1Q9H173 461 aa13.62□□□□□ -0.23
SEC16A-206ENST00000431893 SEPT11Q9NVA2 429 aaKnown RBP13.62□□□□□ -0.23
SEC16A-206ENST00000431893 PODXL2Q9NZ53 605 aa13.62□□□□□ -0.23
SEC16A-206ENST00000431893 SEPT7Q16181 437 aaKnown RBP13.62□□□□□ -0.23
SEC16A-206ENST00000431893 TNMDQ9H2S6 317 aa13.62□□□□□ -0.23
SEC16A-206ENST00000431893 DEF6Q9H4E7 631 aa13.62□□□□□ -0.23
SEC16A-206ENST00000431893 PIBF1Q8WXW3 757 aa13.62□□□□□ -0.23
SEC16A-206ENST00000431893 TMX1Q9H3N1 280 aa13.61□□□□□ -0.23
SEC16A-206ENST00000431893 GOLGA6L10A6NI86 522 aa13.61□□□□□ -0.23
SEC16A-206ENST00000431893 MTERF4Q7Z6M4 381 aaKnown RBP13.61□□□□□ -0.23
SEC16A-206ENST00000431893 ADAMTS8Q9UP79 889 aa13.61□□□□□ -0.23
SEC16A-206ENST00000431893 GNAI1P63096 354 aa13.61□□□□□ -0.23
SEC16A-206ENST00000431893 TAF3Q5VWG9 929 aa13.61□□□□□ -0.23
SEC16A-206ENST00000431893 GRPEL1Q9HAV7 217 aa13.61□□□□□ -0.23
SEC16A-206ENST00000431893 NOB1Q9ULX3 412 aaKnown RBP13.6□□□□□ -0.23
SEC16A-206ENST00000431893 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
SEC16A-206ENST00000431893 CCDC112Q8NEF3 446 aa13.6□□□□□ -0.23
SEC16A-206ENST00000431893 CCDC18Q5T9S5 1454 aa13.6□□□□□ -0.23
SEC16A-206ENST00000431893 HSP90AB4PQ58FF6 505 aa13.6□□□□□ -0.23
SEC16A-206ENST00000431893 C11orf95C9JLR9 678 aaPredicted RBP13.59□□□□□ -0.23
SEC16A-206ENST00000431893 ME1P48163 572 aa13.59□□□□□ -0.23
SEC16A-206ENST00000431893 BCAR3O75815 825 aa13.59□□□□□ -0.23
SEC16A-206ENST00000431893 TTC39AQ5SRH9 613 aa13.59□□□□□ -0.23
SEC16A-206ENST00000431893 CCAR1Q8IX12 1150 aaKnown RBP13.59□□□□□ -0.23
SEC16A-206ENST00000431893 TSR2Q969E8 191 aaKnown RBP13.59□□□□□ -0.23
SEC16A-206ENST00000431893 CCDC102AQ96A19 550 aa13.59□□□□□ -0.23
SEC16A-206ENST00000431893 PPFIBP1Q86W92 1011 aa13.59□□□□□ -0.23
SEC16A-206ENST00000431893 TRERF1Q96PN7 1200 aa13.59□□□□□ -0.23
SEC16A-206ENST00000431893 NACADO15069 1562 aa13.59□□□□□ -0.23
SEC16A-206ENST00000431893 AKNAQ7Z591 1439 aa13.59□□□□□ -0.23
SEC16A-206ENST00000431893 KIF7Q2M1P5 1343 aa13.58□□□□□ -0.23
SEC16A-206ENST00000431893 LRRFIP2Q9Y608 721 aaKnown RBP13.58□□□□□ -0.24
SEC16A-206ENST00000431893 CBX1P83916 185 aa13.58□□□□□ -0.24
SEC16A-206ENST00000431893 CAMK4Q16566 473 aa13.58□□□□□ -0.24
SEC16A-206ENST00000431893 ZNF396Q96N95 335 aaPredicted RBP13.58□□□□□ -0.24
SEC16A-206ENST00000431893 NUP133Q8WUM0 1156 aa13.58□□□□□ -0.24
SEC16A-206ENST00000431893 PDCL3Q9H2J4 239 aa13.58□□□□□ -0.24
SEC16A-206ENST00000431893 CCP110O43303 1012 aa13.57□□□□□ -0.24
SEC16A-206ENST00000431893 EXOSC9Q06265 439 aaKnown RBP13.57□□□□□ -0.24
SEC16A-206ENST00000431893 AEBP1Q8IUX7 1158 aa13.57□□□□□ -0.24
SEC16A-206ENST00000431893 ERLIN2O94905 339 aa13.57□□□□□ -0.24
SEC16A-206ENST00000431893 MBD3O95983 291 aa13.57□□□□□ -0.24
SEC16A-206ENST00000431893 NLRP2Q9NX02 1062 aa13.57□□□□□ -0.24
SEC16A-206ENST00000431893 SART3Q15020 963 aaKnown RBP13.57□□□□□ -0.24
SEC16A-206ENST00000431893 ZNHIT6Q9NWK9 470 aaKnown RBP13.57□□□□□ -0.24
SEC16A-206ENST00000431893 CCDC192P0DO97 292 aa13.56□□□□□ -0.24
SEC16A-206ENST00000431893 TXLNAP40222 546 aa13.56□□□□□ -0.24
SEC16A-206ENST00000431893 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
SEC16A-206ENST00000431893 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
SEC16A-206ENST00000431893 TMEM132EQ6IEE7 984 aa13.56□□□□□ -0.24
SEC16A-206ENST00000431893 UACAQ9BZF9 1416 aa13.56□□□□□ -0.24
SEC16A-206ENST00000431893 TBC1D2BQ9UPU7 963 aa13.56□□□□□ -0.24
SEC16A-206ENST00000431893 CLASRPQ8N2M8 674 aaKnown RBP13.55□□□□□ -0.24
SEC16A-206ENST00000431893 FILIP1Q7Z7B0 1213 aa13.55□□□□□ -0.24
SEC16A-206ENST00000431893 RAPGEF4Q8WZA2 1011 aa13.55□□□□□ -0.24
SEC16A-206ENST00000431893 ZFP91Q96JP5 570 aaPredicted RBP13.55□□□□□ -0.24
SEC16A-206ENST00000431893 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
SEC16A-206ENST00000431893 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
SEC16A-206ENST00000431893 TICAM2Q86XR7 235 aa13.54□□□□□ -0.24
SEC16A-206ENST00000431893 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
SEC16A-206ENST00000431893 SSBP05455 408 aaKnown RBP eCLIP13.54□□□□□ -0.24
SEC16A-206ENST00000431893 LRRCC1Q9C099 1032 aa13.54□□□□□ -0.24
SEC16A-206ENST00000431893 CNNM1Q9NRU3 951 aa13.54□□□□□ -0.24
SEC16A-206ENST00000431893 RAPGEF2Q9Y4G8 1499 aa13.54□□□□□ -0.24
SEC16A-206ENST00000431893 ZRSR2Q15696 482 aaKnown RBP13.53□□□□□ -0.24
SEC16A-206ENST00000431893 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
SEC16A-206ENST00000431893 MTHFSP49914 203 aa13.53□□□□□ -0.24
SEC16A-206ENST00000431893 HMGN5P82970 282 aaKnown RBP13.53□□□□□ -0.24
SEC16A-206ENST00000431893 RABEP1Q15276 862 aa13.53□□□□□ -0.24
SEC16A-206ENST00000431893 SKAP1Q86WV1 359 aa13.53□□□□□ -0.24
SEC16A-206ENST00000431893 CYP46A1Q9Y6A2 500 aa13.53□□□□□ -0.24
SEC16A-206ENST00000431893 SSR1P43307 286 aaKnown RBP13.53□□□□□ -0.24
SEC16A-206ENST00000431893 CNTLNQ9NXG0 1405 aa13.53□□□□□ -0.24
SEC16A-206ENST00000431893 SYCE3A1L190 88 aa13.52□□□□□ -0.24
SEC16A-206ENST00000431893 CCDC69A6NI79 296 aa13.52□□□□□ -0.24
SEC16A-206ENST00000431893 LARP1BQ659C4 914 aaKnown RBP13.52□□□□□ -0.25
SEC16A-206ENST00000431893 TCP11L2Q8N4U5 519 aa13.52□□□□□ -0.25
SEC16A-206ENST00000431893 CCDC113Q9H0I3 377 aa13.52□□□□□ -0.25
SEC16A-206ENST00000431893 DNA2P51530 1060 aa13.52□□□□□ -0.25
SEC16A-206ENST00000431893 MYL6BP14649 208 aa13.51□□□□□ -0.25
SEC16A-206ENST00000431893 MATR3P43243 847 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEC16A-206ENST00000431893 SPATA32Q96LK8 384 aa13.51□□□□□ -0.25
SEC16A-206ENST00000431893 WWC2Q6AWC2 1192 aa13.51□□□□□ -0.25
SEC16A-206ENST00000431893 CWC27Q6UX04 472 aaKnown RBP13.51□□□□□ -0.25
SEC16A-206ENST00000431893 CCDC30Q5VVM6 783 aa13.51□□□□□ -0.25
SEC16A-206ENST00000431893 DDX11Q96FC9 970 aa13.51□□□□□ -0.25
SEC16A-206ENST00000431893 KIAA1328Q86T90 577 aa13.51□□□□□ -0.25
SEC16A-206ENST00000431893 PPP1R1BQ9UD71 204 aaPredicted RBP13.51□□□□□ -0.25
SEC16A-206ENST00000431893 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms