RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 TUSC1Q2TAM9 212 aa8.96□□□□□ -0.98
LINC02541-201ENST00000427157 BCANQ96GW7 911 aa8.96□□□□□ -0.98
LINC02541-201ENST00000427157 ATP13A2Q9NQ11 1180 aa8.96□□□□□ -0.98
LINC02541-201ENST00000427157 C11orf95C9JLR9 678 aaPredicted RBP8.95□□□□□ -0.98
LINC02541-201ENST00000427157 LILRB3O75022 631 aa8.95□□□□□ -0.98
LINC02541-201ENST00000427157 TLL2Q9Y6L7 1015 aa8.95□□□□□ -0.98
LINC02541-201ENST00000427157 NUTM2BA6NNL0 878 aaPredicted RBP8.94□□□□□ -0.98
LINC02541-201ENST00000427157 NUTM2EB1AL46 878 aaPredicted RBP8.94□□□□□ -0.98
LINC02541-201ENST00000427157 CLK2P49760 499 aaKnown RBP8.94□□□□□ -0.98
LINC02541-201ENST00000427157 NUTM2DQ5VT03 806 aaPredicted RBP8.94□□□□□ -0.98
LINC02541-201ENST00000427157 NUTM2AQ8IVF1 878 aaPredicted RBP8.94□□□□□ -0.98
LINC02541-201ENST00000427157 TSC1Q92574 1164 aa8.94□□□□□ -0.98
LINC02541-201ENST00000427157 SLC24A1O60721 1099 aa8.93□□□□□ -0.98
LINC02541-201ENST00000427157 WASF2Q9Y6W5 498 aa8.93□□□□□ -0.98
LINC02541-201ENST00000427157 VARSP26640 1264 aaKnown RBP8.92□□□□□ -0.98
LINC02541-201ENST00000427157 GPBP1L1Q9HC44 474 aaPredicted RBP8.92□□□□□ -0.98
LINC02541-201ENST00000427157 POLR3EQ9NVU0 708 aa8.92□□□□□ -0.98
LINC02541-201ENST00000427157 RTL5Q5HYW3 569 aaPredicted RBP8.91□□□□□ -0.98
LINC02541-201ENST00000427157 RSPH6AQ9H0K4 717 aa8.91□□□□□ -0.98
LINC02541-201ENST00000427157 FOXJ1Q92949 421 aa8.9□□□□□ -0.98
LINC02541-201ENST00000427157 SNRPBP14678 240 aaKnown RBP8.89□□□□□ -0.99
LINC02541-201ENST00000427157 HELBQ8NG08 1087 aaPredicted RBP8.89□□□□□ -0.99
LINC02541-201ENST00000427157 TRIM47Q96LD4 638 aa8.89□□□□□ -0.99
LINC02541-201ENST00000427157 KDM4CQ9H3R0 1056 aa8.89□□□□□ -0.99
LINC02541-201ENST00000427157 BMP1P13497 986 aa8.88□□□□□ -0.99
LINC02541-201ENST00000427157 SENP2Q9HC62 589 aa8.88□□□□□ -0.99
LINC02541-201ENST00000427157 PLEKHG3A1L390 1219 aa8.87□□□□□ -0.99
LINC02541-201ENST00000427157 CAPN5O15484 640 aaPredicted RBP8.87□□□□□ -0.99
LINC02541-201ENST00000427157 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
LINC02541-201ENST00000427157 LCE2AQ5TA79 106 aaPredicted RBP8.87□□□□□ -0.99
LINC02541-201ENST00000427157 MPNDQ8N594 471 aa8.87□□□□□ -0.99
LINC02541-201ENST00000427157 FAM174AQ8TBP5 190 aa8.87□□□□□ -0.99
LINC02541-201ENST00000427157 NNTQ13423 1086 aa8.86□□□□□ -0.99
LINC02541-201ENST00000427157 TREML4Q6UXN2 200 aa8.86□□□□□ -0.99
LINC02541-201ENST00000427157 FAM117AQ9C073 453 aa8.86□□□□□ -0.99
LINC02541-201ENST00000427157 AGERQ15109 404 aa8.85□□□□□ -0.99
LINC02541-201ENST00000427157 TRIM46Q7Z4K8 759 aa8.85□□□□□ -0.99
LINC02541-201ENST00000427157 ADH1CP00326 375 aa8.84□□□□□ -0.99
LINC02541-201ENST00000427157 SKIV2LQ15477 1246 aaKnown RBP8.84□□□□□ -0.99
LINC02541-201ENST00000427157 SH3D19Q5HYK7 790 aa8.84□□□□□ -0.99
LINC02541-201ENST00000427157 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
LINC02541-201ENST00000427157 BPHLQ86WA6 291 aaPredicted RBP8.84□□□□□ -0.99
LINC02541-201ENST00000427157 KIFC2Q96AC6 838 aa8.84□□□□□ -0.99
LINC02541-201ENST00000427157 ARID5BQ14865 1188 aa8.83□□□□□ -1
LINC02541-201ENST00000427157 DDRGK1Q96HY6 314 aa8.83□□□□□ -1
LINC02541-201ENST00000427157 CDK15Q96Q40 435 aa8.83□□□□□ -1
LINC02541-201ENST00000427157 CTDSPL2Q05D32 466 aa8.82□□□□□ -1
LINC02541-201ENST00000427157 NFX1Q12986 1120 aaKnown RBP8.82□□□□□ -1
LINC02541-201ENST00000427157 NBPF14Q5TI25 921 aa8.82□□□□□ -1
LINC02541-201ENST00000427157 PROCA1Q8NCQ7 364 aaPredicted RBP8.82□□□□□ -1
LINC02541-201ENST00000427157 ARMC2Q8NEN0 867 aa8.82□□□□□ -1
LINC02541-201ENST00000427157 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.82□□□□□ -1
LINC02541-201ENST00000427157 WFS1O76024 890 aa8.81□□□□□ -1
LINC02541-201ENST00000427157 TIMP2P16035 220 aa8.81□□□□□ -1
LINC02541-201ENST00000427157 WDR4P57081 412 aaKnown RBP8.81□□□□□ -1
LINC02541-201ENST00000427157 SH3RF1Q7Z6J0 888 aa8.81□□□□□ -1
LINC02541-201ENST00000427157 SH3BP5LQ7L8J4 393 aa8.8□□□□□ -1
LINC02541-201ENST00000427157 LRRN4Q8WUT4 740 aa8.8□□□□□ -1
LINC02541-201ENST00000427157 C1QTNF2Q9BXJ5 285 aa8.8□□□□□ -1
LINC02541-201ENST00000427157 KLF16Q9BXK1 252 aaPredicted RBP8.8□□□□□ -1
LINC02541-201ENST00000427157 NR3C2P08235 984 aa8.79□□□□□ -1
LINC02541-201ENST00000427157 MAGEB6P1A0A0J9YX57 407 aa8.78□□□□□ -1
LINC02541-201ENST00000427157 GRM5P41594 1212 aa8.78□□□□□ -1
LINC02541-201ENST00000427157 PPP2R2DQ66LE6 453 aa8.78□□□□□ -1
LINC02541-201ENST00000427157 ZFP42Q96MM3 310 aa8.78□□□□□ -1
LINC02541-201ENST00000427157 TERTO14746 1132 aaKnown RBP8.77□□□□□ -1.01
LINC02541-201ENST00000427157 NR5A1Q13285 461 aa8.77□□□□□ -1.01
LINC02541-201ENST00000427157 LCE2CQ5TA81 110 aa8.77□□□□□ -1.01
LINC02541-201ENST00000427157 MRPL14Q6P1L8 145 aaKnown RBP8.77□□□□□ -1.01
LINC02541-201ENST00000427157 CARD14Q9BXL6 1004 aa8.77□□□□□ -1.01
LINC02541-201ENST00000427157 ZFAND3Q9H8U3 227 aa8.77□□□□□ -1.01
LINC02541-201ENST00000427157 ATP1B4Q9UN42 357 aaPredicted RBP8.77□□□□□ -1.01
LINC02541-201ENST00000427157 ZIC2O95409 532 aaPredicted RBP8.76□□□□□ -1.01
LINC02541-201ENST00000427157 FSHRP23945 695 aa8.76□□□□□ -1.01
LINC02541-201ENST00000427157 TRMT44Q8IYL2 757 aaKnown RBP8.76□□□□□ -1.01
LINC02541-201ENST00000427157 GPKOWQ92917 476 aaPredicted RBP eCLIP8.76□□□□□ -1.01
LINC02541-201ENST00000427157 ITPKCQ96DU7 683 aa8.76□□□□□ -1.01
LINC02541-201ENST00000427157 MAP4K5Q9Y4K4 846 aa8.75□□□□□ -1.01
LINC02541-201ENST00000427157 AP1G2O75843 785 aa8.74□□□□□ -1.01
LINC02541-201ENST00000427157 NR6A1Q15406 480 aa8.74□□□□□ -1.01
LINC02541-201ENST00000427157 ERFEQ4G0M1 354 aa8.74□□□□□ -1.01
LINC02541-201ENST00000427157 VASH1Q7L8A9 365 aaPredicted RBP8.74□□□□□ -1.01
LINC02541-201ENST00000427157 PURBQ96QR8 312 aaKnown RBP8.74□□□□□ -1.01
LINC02541-201ENST00000427157 FKBPLQ9UIM3 349 aa8.74□□□□□ -1.01
LINC02541-201ENST00000427157 SCARF1Q14162 830 aa8.73□□□□□ -1.01
LINC02541-201ENST00000427157 PDXDC2PQ6P474 469 aa8.72□□□□□ -1.01
LINC02541-201ENST00000427157 USP17L8P0C7I0 530 aa8.71□□□□□ -1.02
LINC02541-201ENST00000427157 ARHGAP9Q9BRR9 750 aa8.71□□□□□ -1.02
LINC02541-201ENST00000427157 HMX1Q9NP08 348 aaPredicted RBP8.71□□□□□ -1.02
LINC02541-201ENST00000427157 NXF1Q9UBU9 619 aaKnown RBP8.71□□□□□ -1.02
LINC02541-201ENST00000427157 WIPF1O43516 503 aa8.7□□□□□ -1.02
LINC02541-201ENST00000427157 NEUROD2Q15784 382 aa8.7□□□□□ -1.02
LINC02541-201ENST00000427157 MEIOBQ8N635 442 aa8.7□□□□□ -1.02
LINC02541-201ENST00000427157 EPS8L1Q8TE68 723 aa8.7□□□□□ -1.02
LINC02541-201ENST00000427157 ZC3H4Q9UPT8 1303 aaKnown RBP8.7□□□□□ -1.02
LINC02541-201ENST00000427157 RFC5P40937 340 aa8.69□□□□□ -1.02
LINC02541-201ENST00000427157 C6orf118Q5T5N4 469 aa8.69□□□□□ -1.02
LINC02541-201ENST00000427157 CCDC116Q8IYX3 515 aa8.69□□□□□ -1.02
LINC02541-201ENST00000427157 OCSTAMPQ9BR26 566 aa8.69□□□□□ -1.02
LINC02541-201ENST00000427157 SOBPA7XYQ1 873 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms