RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 STK38Q15208 465 aa13.84□□□□□ -0.19
HLCS-202ENST00000399120 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
HLCS-202ENST00000399120 DHX37Q8IY37 1157 aaKnown RBP13.84□□□□□ -0.19
HLCS-202ENST00000399120 ERLIN1O75477 346 aa13.84□□□□□ -0.19
HLCS-202ENST00000399120 KANK4Q5T7N3 995 aaPredicted RBP13.84□□□□□ -0.19
HLCS-202ENST00000399120 TANGO6Q9C0B7 1094 aa13.84□□□□□ -0.19
HLCS-202ENST00000399120 DACH1Q9UI36 760 aa13.84□□□□□ -0.19
HLCS-202ENST00000399120 NEBLO76041 1014 aa13.83□□□□□ -0.2
HLCS-202ENST00000399120 ZHX3Q9H4I2 956 aa13.83□□□□□ -0.2
HLCS-202ENST00000399120 SPC24Q8NBT2 197 aa13.83□□□□□ -0.2
HLCS-202ENST00000399120 DESP17661 470 aa13.83□□□□□ -0.2
HLCS-202ENST00000399120 USP8P40818 1118 aa13.83□□□□□ -0.2
HLCS-202ENST00000399120 JMYQ8N9B5 988 aa13.83□□□□□ -0.2
HLCS-202ENST00000399120 RUNDC1Q96C34 613 aa13.83□□□□□ -0.2
HLCS-202ENST00000399120 DYDC1Q8WWB3 177 aa13.82□□□□□ -0.2
HLCS-202ENST00000399120 DNAJC2Q99543 621 aaKnown RBP13.82□□□□□ -0.2
HLCS-202ENST00000399120 HIP1O00291 1037 aa13.82□□□□□ -0.2
HLCS-202ENST00000399120 CLASRPQ8N2M8 674 aaKnown RBP13.82□□□□□ -0.2
HLCS-202ENST00000399120 CCDC112Q8NEF3 446 aa13.82□□□□□ -0.2
HLCS-202ENST00000399120 NFKBIBQ15653 356 aa13.82□□□□□ -0.2
HLCS-202ENST00000399120 TRAK2O60296 914 aa13.81□□□□□ -0.2
HLCS-202ENST00000399120 CEBPZQ03701 1054 aaKnown RBP13.81□□□□□ -0.2
HLCS-202ENST00000399120 IQCEQ6IPM2 695 aa13.81□□□□□ -0.2
HLCS-202ENST00000399120 MCM2P49736 904 aa13.81□□□□□ -0.2
HLCS-202ENST00000399120 FAM193AP78312 1265 aa13.8□□□□□ -0.2
HLCS-202ENST00000399120 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
HLCS-202ENST00000399120 ATP2B2Q01814 1243 aa13.8□□□□□ -0.2
HLCS-202ENST00000399120 SEPT11Q9NVA2 429 aaKnown RBP13.8□□□□□ -0.2
HLCS-202ENST00000399120 RBM10P98175 930 aaKnown RBP13.8□□□□□ -0.2
HLCS-202ENST00000399120 AAMPQ13685 434 aa13.8□□□□□ -0.2
HLCS-202ENST00000399120 TAF3Q5VWG9 929 aa13.79□□□□□ -0.2
HLCS-202ENST00000399120 PHF23Q9BUL5 403 aaPredicted RBP13.79□□□□□ -0.2
HLCS-202ENST00000399120 FIBPO43427 364 aa13.79□□□□□ -0.2
HLCS-202ENST00000399120 CBFA2T2O43439 604 aa13.78□□□□□ -0.2
HLCS-202ENST00000399120 KIF6Q6ZMV9 814 aa13.78□□□□□ -0.2
HLCS-202ENST00000399120 STK11IPQ8N1F8 1099 aa13.78□□□□□ -0.2
HLCS-202ENST00000399120 TTC39AQ5SRH9 613 aa13.78□□□□□ -0.2
HLCS-202ENST00000399120 PRKRIP1Q9H875 184 aaPredicted RBP13.78□□□□□ -0.2
HLCS-202ENST00000399120 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
HLCS-202ENST00000399120 CCDC91Q7Z6B0 441 aa13.78□□□□□ -0.2
HLCS-202ENST00000399120 NEK4P51957 841 aa13.78□□□□□ -0.2
HLCS-202ENST00000399120 LRRCC1Q9C099 1032 aa13.77□□□□□ -0.2
HLCS-202ENST00000399120 TRIM22Q8IYM9 498 aa13.77□□□□□ -0.2
HLCS-202ENST00000399120 LRRFIP2Q9Y608 721 aaKnown RBP13.77□□□□□ -0.2
HLCS-202ENST00000399120 FAM177BA6PVY3 158 aa13.77□□□□□ -0.21
HLCS-202ENST00000399120 FAM177A1Q8N128 213 aaPredicted RBP13.77□□□□□ -0.21
HLCS-202ENST00000399120 HMOX1P09601 288 aa13.77□□□□□ -0.21
HLCS-202ENST00000399120 GNL3LQ9NVN8 582 aaKnown RBP13.77□□□□□ -0.21
HLCS-202ENST00000399120 SURF6O75683 361 aaKnown RBP13.77□□□□□ -0.21
HLCS-202ENST00000399120 SOGA3Q5TF21 947 aa13.77□□□□□ -0.21
HLCS-202ENST00000399120 JAKMIP3Q5VZ66 844 aa13.76□□□□□ -0.21
HLCS-202ENST00000399120 TNMDQ9H2S6 317 aa13.76□□□□□ -0.21
HLCS-202ENST00000399120 GNAI3P08754 354 aa13.76□□□□□ -0.21
HLCS-202ENST00000399120 CCDC18Q5T9S5 1454 aa13.76□□□□□ -0.21
HLCS-202ENST00000399120 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.76□□□□□ -0.21
HLCS-202ENST00000399120 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.76□□□□□ -0.215e-6■□□□□ 8.4
HLCS-202ENST00000399120 MATR3P43243 847 aaKnown RBP eCLIP13.76□□□□□ -0.21
HLCS-202ENST00000399120 SLC26A8Q96RN1 970 aa13.76□□□□□ -0.21
HLCS-202ENST00000399120 NLRP2Q9NX02 1062 aa13.76□□□□□ -0.21
HLCS-202ENST00000399120 CCDC158Q5M9N0 1113 aa13.75□□□□□ -0.21
HLCS-202ENST00000399120 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
HLCS-202ENST00000399120 CCDC69A6NI79 296 aa13.75□□□□□ -0.21
HLCS-202ENST00000399120 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
HLCS-202ENST00000399120 NOL7Q9UMY1 257 aaKnown RBP13.75□□□□□ -0.21
HLCS-202ENST00000399120 ME1P48163 572 aa13.75□□□□□ -0.21
HLCS-202ENST00000399120 TAF4BQ92750 862 aa13.75□□□□□ -0.21
HLCS-202ENST00000399120 USP47Q96K76 1375 aa13.75□□□□□ -0.21
HLCS-202ENST00000399120 MPHOSPH10O00566 681 aaKnown RBP13.74□□□□□ -0.21
HLCS-202ENST00000399120 NF2P35240 595 aa13.74□□□□□ -0.21
HLCS-202ENST00000399120 CNNM1Q9NRU3 951 aa13.74□□□□□ -0.21
HLCS-202ENST00000399120 CCDC30Q5VVM6 783 aa13.74□□□□□ -0.21
HLCS-202ENST00000399120 CCDC102AQ96A19 550 aa13.74□□□□□ -0.21
HLCS-202ENST00000399120 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
HLCS-202ENST00000399120 SSR1P43307 286 aaKnown RBP13.74□□□□□ -0.21
HLCS-202ENST00000399120 GIMAP7Q8NHV1 300 aa13.74□□□□□ -0.21
HLCS-202ENST00000399120 PANK1Q8TE04 598 aa13.74□□□□□ -0.21
HLCS-202ENST00000399120 CCDC57Q2TAC2 916 aa13.74□□□□□ -0.21
HLCS-202ENST00000399120 STAMBPO95630 424 aa13.73□□□□□ -0.21
HLCS-202ENST00000399120 TRIM21P19474 475 aaKnown RBP13.73□□□□□ -0.21
HLCS-202ENST00000399120 ANKRD1Q15327 319 aa13.73□□□□□ -0.21
HLCS-202ENST00000399120 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
HLCS-202ENST00000399120 GOLGA6L10A0A0M3HER8 536 aa13.73□□□□□ -0.21
HLCS-202ENST00000399120 ATF3P18847 181 aa13.73□□□□□ -0.21
HLCS-202ENST00000399120 MAP2K1Q02750 393 aaPredicted RBP13.73□□□□□ -0.21
HLCS-202ENST00000399120 SOGA1O94964 1423 aa13.73□□□□□ -0.21
HLCS-202ENST00000399120 KIAA1328Q86T90 577 aa13.72□□□□□ -0.21
HLCS-202ENST00000399120 CYP46A1Q9Y6A2 500 aa13.72□□□□□ -0.21
HLCS-202ENST00000399120 SSBP05455 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
HLCS-202ENST00000399120 STK3Q13188 491 aa13.72□□□□□ -0.21
HLCS-202ENST00000399120 POTEJP0CG39 1038 aa13.72□□□□□ -0.21
HLCS-202ENST00000399120 CETN2P41208 172 aa13.71□□□□□ -0.21
HLCS-202ENST00000399120 ANAPC15P60006 121 aa13.71□□□□□ -0.22
HLCS-202ENST00000399120 NUP133Q8WUM0 1156 aa13.71□□□□□ -0.22
HLCS-202ENST00000399120 PKNOX2Q96KN3 472 aa13.71□□□□□ -0.22
HLCS-202ENST00000399120 PPM1FP49593 454 aaPredicted RBP13.7□□□□□ -0.22
HLCS-202ENST00000399120 KRT85P78386 507 aa13.7□□□□□ -0.22
HLCS-202ENST00000399120 CCDC148Q8NFR7 591 aa13.7□□□□□ -0.22
HLCS-202ENST00000399120 EPB41L2O43491 1005 aaKnown RBP13.7□□□□□ -0.22
HLCS-202ENST00000399120 DNAI2Q9GZS0 605 aa13.7□□□□□ -0.22
HLCS-202ENST00000399120 CEP63Q96MT8 703 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms