RNA–Protein interactions for RNA: ENST00000395856.3

NCOA1-203, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-203ENST00000395856 ATP2B2Q01814 1243 aa4.8□□□□□ -1.64
NCOA1-203ENST00000395856 RNF20Q5VTR2 975 aa4.8□□□□□ -1.64
NCOA1-203ENST00000395856 MATR3P43243 847 aaKnown RBP eCLIP4.79□□□□□ -1.64
NCOA1-203ENST00000395856 FKBP5Q13451 457 aaPredicted RBP4.79□□□□□ -1.64
NCOA1-203ENST00000395856 APAF1O14727 1248 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 SSR1P43307 286 aaKnown RBP4.79□□□□□ -1.64
NCOA1-203ENST00000395856 SPINK5Q9NQ38 1064 aaPredicted RBP4.79□□□□□ -1.64
NCOA1-203ENST00000395856 LRRFIP2Q9Y608 721 aaKnown RBP4.79□□□□□ -1.64
NCOA1-203ENST00000395856 NUP155O75694 1391 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 FANCIQ9NVI1 1328 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 ERLIN2O94905 339 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 DNA2P51530 1060 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 ZHX1Q9UKY1 873 aaPredicted RBP4.79□□□□□ -1.64
NCOA1-203ENST00000395856 KIF20AO95235 890 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 NUCB2P80303 420 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 NEXNQ0ZGT2 675 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 NUTM2GQ5VZR2 741 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 RALYLQ86SE5 291 aaKnown RBP4.79□□□□□ -1.64
NCOA1-203ENST00000395856 LRRCC1Q9C099 1032 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 CFAP45Q9UL16 551 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 GBP2P32456 591 aaPredicted RBP4.79□□□□□ -1.64
NCOA1-203ENST00000395856 GOPCQ9HD26 462 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 HDAC5Q9UQL6 1122 aa4.79□□□□□ -1.64
NCOA1-203ENST00000395856 CEP164Q9UPV0 1460 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 POLR3GO15318 223 aaPredicted RBP4.78□□□□□ -1.64
NCOA1-203ENST00000395856 RIPK4P57078 832 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 FILIP1LQ4L180 1135 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 DZIP1LQ8IYY4 767 aaKnown RBP4.78□□□□□ -1.64
NCOA1-203ENST00000395856 BBXQ8WY36 941 aaPredicted RBP4.78□□□□□ -1.64
NCOA1-203ENST00000395856 HNRNPMP52272 730 aaKnown RBP eCLIP4.78□□□□□ -1.641e-7■■■■□ 26
NCOA1-203ENST00000395856 CAMK4Q16566 473 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 RSPH4AQ5TD94 716 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 PSMD1Q99460 953 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 FSD1Q9BTV5 496 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 CLEC11AQ9Y240 323 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 TEFQ10587 303 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 RNF187Q5TA31 235 aaPredicted RBP4.78□□□□□ -1.64
NCOA1-203ENST00000395856 CEP63Q96MT8 703 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 DMRT2Q9Y5R5 561 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 MINK1Q8N4C8 1332 aaPredicted RBP4.78□□□□□ -1.64
NCOA1-203ENST00000395856 GOLGA6L7A0A1B0GV03 622 aa4.78□□□□□ -1.64
NCOA1-203ENST00000395856 KINO60870 393 aaKnown RBP4.78□□□□□ -1.64
NCOA1-203ENST00000395856 ATF3P18847 181 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 UBE4AQ14139 1066 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 RIC3Q7Z5B4 369 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 NLRP13Q86W25 1043 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 PPFIBP1Q86W92 1011 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 CCDC112Q8NEF3 446 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 COG3Q96JB2 828 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 NINLQ9Y2I6 1382 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 UBAP1LF5GYI3 381 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 HMGN5P82970 282 aaKnown RBP4.77□□□□□ -1.65
NCOA1-203ENST00000395856 MAP2K1Q02750 393 aaPredicted RBP4.77□□□□□ -1.65
NCOA1-203ENST00000395856 L3MBTL2Q969R5 705 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 DDX19BQ9UMR2 479 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.77□□□□□ -1.65
NCOA1-203ENST00000395856 CDC45O75419 566 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 PLCD3Q8N3E9 789 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 TNMDQ9H2S6 317 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 TSPYL4Q9UJ04 414 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 TNIKQ9UKE5 1360 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 WWC2Q6AWC2 1192 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 ANKRD18AQ8IVF6 992 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 INCENPQ9NQS7 918 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 CGNQ9P2M7 1197 aaKnown RBP4.77□□□□□ -1.65
NCOA1-203ENST00000395856 LRRFIP1Q32MZ4 808 aaKnown RBP4.77□□□□□ -1.65
NCOA1-203ENST00000395856 NEBLO76041 1014 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 TERF1P54274 439 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 STK38Q15208 465 aa4.77□□□□□ -1.65
NCOA1-203ENST00000395856 TMCO5BA8MYB1 307 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 ATP2C2O75185 946 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 LETM1O95202 739 aaPredicted RBP4.76□□□□□ -1.65
NCOA1-203ENST00000395856 MYCNP04198 464 aaPredicted RBP4.76□□□□□ -1.65
NCOA1-203ENST00000395856 NBPF8Q3BBV2 869 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 NBPF14Q5TI25 921 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 MTERF4Q7Z6M4 381 aaKnown RBP4.76□□□□□ -1.65
NCOA1-203ENST00000395856 NUP133Q8WUM0 1156 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 ST20-MTHFSA0A0A6YYL1 179 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 CCP110O43303 1012 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 CHMP4BP1P59074 171 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 TTC39AQ5SRH9 613 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 CNTROBQ8N137 903 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 SIL1Q9H173 461 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 GRPEL1Q9HAV7 217 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 WRNQ14191 1432 aaPredicted RBP eCLIP4.76□□□□□ -1.65
NCOA1-203ENST00000395856 NEK4P51957 841 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 PDE3BQ13370 1112 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 KIAA1328Q86T90 577 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 ZNHIT6Q9NWK9 470 aaKnown RBP4.76□□□□□ -1.65
NCOA1-203ENST00000395856 ZRANB1Q9UGI0 708 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 KIF3BO15066 747 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 TTLL12Q14166 644 aaPredicted RBP4.76□□□□□ -1.65
NCOA1-203ENST00000395856 CCDC178Q5BJE1 867 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 KIF27Q86VH2 1401 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 SSBP05455 408 aaKnown RBP eCLIP4.76□□□□□ -1.65
NCOA1-203ENST00000395856 XBP1P17861 261 aa4.76□□□□□ -1.65
NCOA1-203ENST00000395856 ERC2O15083 957 aa4.75□□□□□ -1.65
NCOA1-203ENST00000395856 EIF3JO75822 258 aaKnown RBP4.75□□□□□ -1.65
NCOA1-203ENST00000395856 ME1P48163 572 aa4.75□□□□□ -1.65
NCOA1-203ENST00000395856 TMCO3Q6UWJ1 677 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms