RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 DZIP1Q86YF9 867 aaKnown RBP9.48□□□□□ -0.89
TRPS1-203ENST00000395715 MBD3O95983 291 aa9.48□□□□□ -0.89
TRPS1-203ENST00000395715 CCDC148Q8NFR7 591 aa9.48□□□□□ -0.89
TRPS1-203ENST00000395715 SERPINA10Q9UK55 444 aa9.48□□□□□ -0.89
TRPS1-203ENST00000395715 POLR3GO15318 223 aaPredicted RBP9.47□□□□□ -0.89
TRPS1-203ENST00000395715 NEBLO76041 1014 aa9.47□□□□□ -0.89
TRPS1-203ENST00000395715 CDK5RAP3Q96JB5 506 aa9.47□□□□□ -0.89
TRPS1-203ENST00000395715 SARNPP82979 210 aaKnown RBP9.47□□□□□ -0.89
TRPS1-203ENST00000395715 EEA1Q15075 1411 aa9.47□□□□□ -0.89
TRPS1-203ENST00000395715 CEP83Q9Y592 693 aa9.47□□□□□ -0.89
TRPS1-203ENST00000395715 DESP17661 470 aa9.47□□□□□ -0.89
TRPS1-203ENST00000395715 DCAF11Q8TEB1 546 aa9.47□□□□□ -0.89
TRPS1-203ENST00000395715 NOL3O60936 208 aaKnown RBP9.47□□□□□ -0.89
TRPS1-203ENST00000395715 SPECC1LQ69YQ0 1117 aa9.47□□□□□ -0.89
TRPS1-203ENST00000395715 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
TRPS1-203ENST00000395715 TCHPQ9BT92 498 aa9.46□□□□□ -0.89
TRPS1-203ENST00000395715 ZMYND15Q9H091 742 aa9.46□□□□□ -0.89
TRPS1-203ENST00000395715 ANAPC15P60006 121 aa9.46□□□□□ -0.9
TRPS1-203ENST00000395715 ARID4AP29374 1257 aaPredicted RBP9.46□□□□□ -0.9
TRPS1-203ENST00000395715 IFFO1Q0D2I5 559 aa9.46□□□□□ -0.9
TRPS1-203ENST00000395715 INTS3Q68E01 1043 aaKnown RBP9.46□□□□□ -0.9
TRPS1-203ENST00000395715 FEZ2Q9UHY8 353 aaPredicted RBP9.46□□□□□ -0.9
TRPS1-203ENST00000395715 GTF2F1P35269 517 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRPS1-203ENST00000395715 CCDC192P0DO97 292 aa9.45□□□□□ -0.9
TRPS1-203ENST00000395715 CCDC6Q16204 474 aa9.45□□□□□ -0.9
TRPS1-203ENST00000395715 MIPOL1Q8TD10 442 aa9.45□□□□□ -0.9
TRPS1-203ENST00000395715 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
TRPS1-203ENST00000395715 DACH1Q9UI36 760 aa9.45□□□□□ -0.9
TRPS1-203ENST00000395715 CCDC27Q2M243 656 aa9.45□□□□□ -0.9
TRPS1-203ENST00000395715 CBFA2T2O43439 604 aa9.44□□□□□ -0.9
TRPS1-203ENST00000395715 TANGO6Q9C0B7 1094 aa9.44□□□□□ -0.9
TRPS1-203ENST00000395715 STIM1Q13586 685 aa9.44□□□□□ -0.9
TRPS1-203ENST00000395715 FBF1Q8TES7 1133 aa9.44□□□□□ -0.9
TRPS1-203ENST00000395715 HSPA4P34932 840 aa9.44□□□□□ -0.9
TRPS1-203ENST00000395715 ZFYP08048 801 aaPredicted RBP9.44□□□□□ -0.9
TRPS1-203ENST00000395715 SAMD1Q6SPF0 538 aaPredicted RBP9.44□□□□□ -0.9
TRPS1-203ENST00000395715 SEPT10Q9P0V9 454 aa9.44□□□□□ -0.9
TRPS1-203ENST00000395715 FERP16591 822 aa9.43□□□□□ -0.9
TRPS1-203ENST00000395715 SEPT14Q6ZU15 432 aa9.43□□□□□ -0.9
TRPS1-203ENST00000395715 VPS37DQ86XT2 251 aa9.43□□□□□ -0.9
TRPS1-203ENST00000395715 RALYLQ86SE5 291 aaKnown RBP9.43□□□□□ -0.9
TRPS1-203ENST00000395715 KRT18P05783 430 aaKnown RBP9.43□□□□□ -0.9
TRPS1-203ENST00000395715 TAF4BQ92750 862 aa9.43□□□□□ -0.9
TRPS1-203ENST00000395715 CLIP1P30622 1438 aa9.43□□□□□ -0.9
TRPS1-203ENST00000395715 EID1Q9Y6B2 187 aa9.43□□□□□ -0.9
TRPS1-203ENST00000395715 NGDNQ8NEJ9 315 aaKnown RBP9.43□□□□□ -0.9
TRPS1-203ENST00000395715 IFIT2P09913 472 aaKnown RBP9.43□□□□□ -0.9
TRPS1-203ENST00000395715 PDE3BQ13370 1112 aa9.43□□□□□ -0.9
TRPS1-203ENST00000395715 CASQ1P31415 396 aa9.42□□□□□ -0.9
TRPS1-203ENST00000395715 CEP120Q8N960 986 aa9.42□□□□□ -0.9
TRPS1-203ENST00000395715 ZMAT2Q96NC0 199 aaKnown RBP9.42□□□□□ -0.9
TRPS1-203ENST00000395715 PRPF40AO75400 957 aaKnown RBP9.42□□□□□ -0.9
TRPS1-203ENST00000395715 ZFP91Q96JP5 570 aaPredicted RBP9.42□□□□□ -0.9
TRPS1-203ENST00000395715 SIN3AQ96ST3 1273 aa9.42□□□□□ -0.9
TRPS1-203ENST00000395715 PHLDB1Q86UU1 1377 aa9.42□□□□□ -0.9
TRPS1-203ENST00000395715 FLIIQ13045 1269 aa9.42□□□□□ -0.9
TRPS1-203ENST00000395715 GTPBP4Q9BZE4 634 aaKnown RBP9.42□□□□□ -0.9
TRPS1-203ENST00000395715 C22orf23Q9BZE7 217 aa9.42□□□□□ -0.9
TRPS1-203ENST00000395715 EPB41L2O43491 1005 aaKnown RBP9.42□□□□□ -0.9
TRPS1-203ENST00000395715 GRPEL1Q9HAV7 217 aa9.42□□□□□ -0.9
TRPS1-203ENST00000395715 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
TRPS1-203ENST00000395715 GSTTP1A0A1W2PQM5 241 aa9.42□□□□□ -0.9
TRPS1-203ENST00000395715 PLCD3Q8N3E9 789 aa9.41□□□□□ -0.9
TRPS1-203ENST00000395715 ARHGAP29Q52LW3 1261 aa9.41□□□□□ -0.9
TRPS1-203ENST00000395715 CTR9Q6PD62 1173 aa9.41□□□□□ -0.9
TRPS1-203ENST00000395715 CCDC174Q6PII3 467 aa9.41□□□□□ -0.9
TRPS1-203ENST00000395715 LMAN1P49257 510 aa9.41□□□□□ -0.9
TRPS1-203ENST00000395715 AMPHP49418 695 aa9.41□□□□□ -0.9
TRPS1-203ENST00000395715 RNF168Q8IYW5 571 aaPredicted RBP9.41□□□□□ -0.9
TRPS1-203ENST00000395715 ZNF396Q96N95 335 aaPredicted RBP9.41□□□□□ -0.9
TRPS1-203ENST00000395715 ESPNB1AK53 854 aa9.41□□□□□ -0.9
TRPS1-203ENST00000395715 TNMDQ9H2S6 317 aa9.41□□□□□ -0.9
TRPS1-203ENST00000395715 PSMA5P28066 241 aa9.4□□□□□ -0.9
TRPS1-203ENST00000395715 SPECC1Q5M775 1068 aa9.4□□□□□ -0.9
TRPS1-203ENST00000395715 SMARCC1Q92922 1105 aaPredicted RBP9.4□□□□□ -0.9
TRPS1-203ENST00000395715 CCDC158Q5M9N0 1113 aa9.4□□□□□ -0.9
TRPS1-203ENST00000395715 MSL1Q68DK7 614 aa9.4□□□□□ -0.9
TRPS1-203ENST00000395715 GBP7Q8N8V2 638 aaPredicted RBP9.4□□□□□ -0.9
TRPS1-203ENST00000395715 IMMTQ16891 758 aaKnown RBP9.4□□□□□ -0.9
TRPS1-203ENST00000395715 MPHOSPH10O00566 681 aaKnown RBP9.4□□□□□ -0.9
TRPS1-203ENST00000395715 PDIA4P13667 645 aaKnown RBP9.4□□□□□ -0.9
TRPS1-203ENST00000395715 RFC1P35251 1148 aaPredicted RBP9.4□□□□□ -0.9
TRPS1-203ENST00000395715 KIF2AO00139 706 aaPredicted RBP9.4□□□□□ -0.9
TRPS1-203ENST00000395715 CETN2P41208 172 aa9.4□□□□□ -0.9
TRPS1-203ENST00000395715 FILIP1Q7Z7B0 1213 aa9.4□□□□□ -0.9
TRPS1-203ENST00000395715 RPUSD2Q8IZ73 545 aaKnown RBP9.4□□□□□ -0.9
TRPS1-203ENST00000395715 ZNF397Q8NF99 534 aaPredicted RBP9.4□□□□□ -0.9
TRPS1-203ENST00000395715 WHAMMQ8TF30 809 aa9.4□□□□□ -0.9
TRPS1-203ENST00000395715 SYTL4Q96C24 671 aaPredicted RBP9.4□□□□□ -0.9
TRPS1-203ENST00000395715 TTC36A6NLP5 189 aa9.4□□□□□ -0.91
TRPS1-203ENST00000395715 PPM1FP49593 454 aaPredicted RBP9.39□□□□□ -0.91
TRPS1-203ENST00000395715 PPP4R3BQ5MIZ7 849 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 SRRTQ9BXP5 876 aaKnown RBP9.39□□□□□ -0.91
TRPS1-203ENST00000395715 PDCP20941 246 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 NUP133Q8WUM0 1156 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 CFAP58Q5T655 872 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 IVLP07476 585 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 PTPN14Q15678 1187 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 CEP57Q86XR8 500 aa9.39□□□□□ -0.91
TRPS1-203ENST00000395715 MPNDQ8N594 471 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms