RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ST8SIA5O15466 376 aa3.14□□□□□ -1.91
SNORD28B-201ENST00000390993 LINC01559Q495D7 138 aa3.14□□□□□ -1.91
SNORD28B-201ENST00000390993 BPHLQ86WA6 291 aaPredicted RBP3.14□□□□□ -1.91
SNORD28B-201ENST00000390993 ZNF511Q8NB15 262 aa3.14□□□□□ -1.91
SNORD28B-201ENST00000390993 BAP1Q92560 729 aa3.14□□□□□ -1.91
SNORD28B-201ENST00000390993 AAASQ9NRG9 546 aa3.14□□□□□ -1.91
SNORD28B-201ENST00000390993 SMPD1P17405 629 aa3.13□□□□□ -1.91
SNORD28B-201ENST00000390993 SH3BP2P78314 561 aa3.13□□□□□ -1.91
SNORD28B-201ENST00000390993 SCARF1Q14162 830 aa3.13□□□□□ -1.91
SNORD28B-201ENST00000390993 SKIV2LQ15477 1246 aaKnown RBP3.13□□□□□ -1.91
SNORD28B-201ENST00000390993 CABLES1Q8TDN4 633 aa3.13□□□□□ -1.91
SNORD28B-201ENST00000390993 GPKOWQ92917 476 aaPredicted RBP eCLIP3.13□□□□□ -1.91
SNORD28B-201ENST00000390993 KDM4CQ9H3R0 1056 aa3.13□□□□□ -1.91
SNORD28B-201ENST00000390993 POLR3EQ9NVU0 708 aa3.13□□□□□ -1.91
SNORD28B-201ENST00000390993 PCDHB15Q9Y5E8 787 aa3.13□□□□□ -1.91
SNORD28B-201ENST00000390993 CFAP99D6REC4 459 aa3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 J3QL48 77 aa3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 CAPN5O15484 640 aaPredicted RBP3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 LILRB3O75022 631 aa3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 UPP2O95045 317 aa3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 SKOR1P84550 965 aa3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 ARID5BQ14865 1188 aa3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 SH3D19Q5HYK7 790 aa3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 PTCRAQ6ISU1 281 aaPredicted RBP3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 MPNDQ8N594 471 aa3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 PCMTD1Q96MG8 357 aaPredicted RBP3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 LIMD1Q9UGP4 676 aa3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 CDV3Q9UKY7 258 aaKnown RBP3.12□□□□□ -1.91
SNORD28B-201ENST00000390993 APBB1O00213 710 aa3.11□□□□□ -1.91
SNORD28B-201ENST00000390993 NEUROD2Q15784 382 aa3.11□□□□□ -1.91
SNORD28B-201ENST00000390993 QPCTQ16769 361 aa3.11□□□□□ -1.91
SNORD28B-201ENST00000390993 SLC16A10Q8TF71 515 aa3.11□□□□□ -1.91
SNORD28B-201ENST00000390993 ZNF592Q92610 1267 aa3.11□□□□□ -1.91
SNORD28B-201ENST00000390993 HPS1Q92902 700 aa3.11□□□□□ -1.91
SNORD28B-201ENST00000390993 ATP13A2Q9NQ11 1180 aa3.11□□□□□ -1.91
SNORD28B-201ENST00000390993 MAP10Q9P2G4 905 aa3.11□□□□□ -1.91
SNORD28B-201ENST00000390993 ZC3H4Q9UPT8 1303 aaKnown RBP3.11□□□□□ -1.91
SNORD28B-201ENST00000390993 MAGEB6P1A0A0J9YX57 407 aa3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 LCE2BO14633 110 aa3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 SIAH2O43255 324 aa3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 AP1G2O75843 785 aa3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 ADH1CP00326 375 aa3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 F12P00748 615 aaPredicted RBP3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 NR5A1Q13285 461 aa3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 NNTQ13423 1086 aa3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 VASH1Q7L8A9 365 aaPredicted RBP3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 ZBTB33Q86T24 672 aa3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 SLC10A4Q96EP9 437 aa3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 GPBP1L1Q9HC44 474 aaPredicted RBP3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 GMPR2Q9P2T1 348 aaKnown RBP3.1□□□□□ -1.91
SNORD28B-201ENST00000390993 WDR4P57081 412 aaKnown RBP3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 PTK2Q05397 1052 aa3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 TMEM259Q4ZIN3 620 aa3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 RTL5Q5HYW3 569 aaPredicted RBP3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 FOXJ1Q92949 421 aa3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 ZNF775Q96BV0 537 aaPredicted RBP3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 TRIM47Q96LD4 638 aa3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 ARHGAP9Q9BRR9 750 aa3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 CARD14Q9BXL6 1004 aa3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 GOPCQ9HD26 462 aa3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 PGPEP1Q9NXJ5 209 aa3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 TLL2Q9Y6L7 1015 aa3.09□□□□□ -1.91
SNORD28B-201ENST00000390993 PER1O15534 1290 aaPredicted RBP3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 DHX9Q08211 1270 aaKnown RBP3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 PPP2R2DQ66LE6 453 aa3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 PDXDC2PQ6P474 469 aa3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 CDK15Q96Q40 435 aa3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 FAM117AQ9C073 453 aa3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 PRM3Q9NNZ6 103 aa3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 DACH1Q9UI36 760 aa3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 FKBPLQ9UIM3 349 aa3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 ZNF330Q9Y3S2 320 aaPredicted RBP3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 GPSM3Q9Y4H4 160 aa3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 MAP4K5Q9Y4K4 846 aa3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 EMILIN1Q9Y6C2 1016 aa3.08□□□□□ -1.92
SNORD28B-201ENST00000390993 WFS1O76024 890 aa3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 ZIC2O95409 532 aaPredicted RBP3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 FSHRP23945 695 aa3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 INSM1Q01101 510 aaPredicted RBP3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 CTDSPL2Q05D32 466 aa3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 NBPF20Q3BBV1 942 aa3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 MRPL14Q6P1L8 145 aaKnown RBP3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 TREML4Q6UXN2 200 aa3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 NPAS3Q8IXF0 933 aa3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 TRMT44Q8IYL2 757 aaKnown RBP3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 CCDC116Q8IYX3 515 aa3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 PROCA1Q8NCQ7 364 aaPredicted RBP3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 ESF1Q9H501 851 aaKnown RBP3.07□□□□□ -1.92
SNORD28B-201ENST00000390993 FAM181BA6NEQ2 426 aa3.06□□□□□ -1.92
SNORD28B-201ENST00000390993 POTECB2RU33 542 aa3.06□□□□□ -1.92
SNORD28B-201ENST00000390993 MAN1A2O60476 641 aa3.06□□□□□ -1.92
SNORD28B-201ENST00000390993 USP17L8P0C7I0 530 aa3.06□□□□□ -1.92
SNORD28B-201ENST00000390993 BMP2P12643 396 aa3.06□□□□□ -1.92
SNORD28B-201ENST00000390993 TIMP2P16035 220 aa3.06□□□□□ -1.92
SNORD28B-201ENST00000390993 NR6A1Q15406 480 aa3.06□□□□□ -1.92
SNORD28B-201ENST00000390993 SH3BP5LQ7L8J4 393 aa3.06□□□□□ -1.92
SNORD28B-201ENST00000390993 DZIP3Q86Y13 1208 aaKnown RBP3.06□□□□□ -1.92
SNORD28B-201ENST00000390993 CCDC125Q86Z20 511 aa3.06□□□□□ -1.92
SNORD28B-201ENST00000390993 TSEN34Q9BSV6 310 aaKnown RBP3.06□□□□□ -1.92
SNORD28B-201ENST00000390993 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms