RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 XBP1P17861 261 aa18.54■□□□□ 0.56
ALK-201ENST00000389048 SYCP1Q15431 976 aa18.54■□□□□ 0.56
ALK-201ENST00000389048 ERCC4Q92889 916 aaPredicted RBP18.54■□□□□ 0.56
ALK-201ENST00000389048 SEPT11Q9NVA2 429 aaKnown RBP18.54■□□□□ 0.56
ALK-201ENST00000389048 NLRP2Q9NX02 1062 aa18.54■□□□□ 0.56
ALK-201ENST00000389048 SMARCE1Q969G3 411 aa18.53■□□□□ 0.56
ALK-201ENST00000389048 PSMA5P28066 241 aa18.53■□□□□ 0.56
ALK-201ENST00000389048 FILIP1LQ4L180 1135 aa18.52■□□□□ 0.56
ALK-201ENST00000389048 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
ALK-201ENST00000389048 STK38Q15208 465 aa18.52■□□□□ 0.55
ALK-201ENST00000389048 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
ALK-201ENST00000389048 RBM42Q9BTD8 480 aaKnown RBP18.51■□□□□ 0.55
ALK-201ENST00000389048 PDZRN3Q9UPQ7 1066 aa18.51■□□□□ 0.55
ALK-201ENST00000389048 CCDC66A2RUB6 948 aa18.51■□□□□ 0.55
ALK-201ENST00000389048 SEPT7Q16181 437 aaKnown RBP18.51■□□□□ 0.55
ALK-201ENST00000389048 TTC39AQ5SRH9 613 aa18.51■□□□□ 0.55
ALK-201ENST00000389048 DEF6Q9H4E7 631 aa18.51■□□□□ 0.55
ALK-201ENST00000389048 UQCRHLA0A096LP55 91 aa18.51■□□□□ 0.55
ALK-201ENST00000389048 UQCRHP07919 91 aa18.51■□□□□ 0.55
ALK-201ENST00000389048 PRDM10Q9NQV6 1147 aa18.51■□□□□ 0.55
ALK-201ENST00000389048 CCAR1Q8IX12 1150 aaKnown RBP18.5■□□□□ 0.55
ALK-201ENST00000389048 GNAI1P63096 354 aa18.5■□□□□ 0.55
ALK-201ENST00000389048 RAPGEF4Q8WZA2 1011 aa18.5■□□□□ 0.55
ALK-201ENST00000389048 MYO6Q9UM54 1294 aa18.5■□□□□ 0.55
ALK-201ENST00000389048 CCDC181Q5TID7 509 aa18.5■□□□□ 0.55
ALK-201ENST00000389048 NUP133Q8WUM0 1156 aa18.49■□□□□ 0.55
ALK-201ENST00000389048 PDCL3Q9H2J4 239 aa18.49■□□□□ 0.55
ALK-201ENST00000389048 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
ALK-201ENST00000389048 HSP90AB4PQ58FF6 505 aa18.49■□□□□ 0.55
ALK-201ENST00000389048 TMEM132EQ6IEE7 984 aa18.49■□□□□ 0.55
ALK-201ENST00000389048 ADAMTS8Q9UP79 889 aa18.49■□□□□ 0.55
ALK-201ENST00000389048 TAF3Q5VWG9 929 aa18.49■□□□□ 0.55
ALK-201ENST00000389048 NOB1Q9ULX3 412 aaKnown RBP18.48■□□□□ 0.55
ALK-201ENST00000389048 TSR2Q969E8 191 aaKnown RBP18.48■□□□□ 0.55
ALK-201ENST00000389048 TMX1Q9H3N1 280 aa18.48■□□□□ 0.55
ALK-201ENST00000389048 C11orf95C9JLR9 678 aaPredicted RBP18.47■□□□□ 0.55
ALK-201ENST00000389048 TNMDQ9H2S6 317 aa18.47■□□□□ 0.55
ALK-201ENST00000389048 ME1P48163 572 aa18.47■□□□□ 0.55
ALK-201ENST00000389048 SART3Q15020 963 aaKnown RBP18.47■□□□□ 0.55
ALK-201ENST00000389048 TBC1D2BQ9UPU7 963 aa18.47■□□□□ 0.55
ALK-201ENST00000389048 GOLGA6L10A6NI86 522 aa18.46■□□□□ 0.55
ALK-201ENST00000389048 LETM1O95202 739 aaPredicted RBP18.46■□□□□ 0.55
ALK-201ENST00000389048 CNNM1Q9NRU3 951 aa18.46■□□□□ 0.55
ALK-201ENST00000389048 BCAR3O75815 825 aa18.45■□□□□ 0.54
ALK-201ENST00000389048 KIAA0754O94854 1291 aa18.45■□□□□ 0.54
ALK-201ENST00000389048 PPFIBP1Q86W92 1011 aa18.45■□□□□ 0.54
ALK-201ENST00000389048 LRRFIP2Q9Y608 721 aaKnown RBP18.45■□□□□ 0.54
ALK-201ENST00000389048 TXLNAP40222 546 aa18.44■□□□□ 0.54
ALK-201ENST00000389048 CLASRPQ8N2M8 674 aaKnown RBP18.44■□□□□ 0.54
ALK-201ENST00000389048 EXOSC9Q06265 439 aaKnown RBP18.44■□□□□ 0.54
ALK-201ENST00000389048 WWC2Q6AWC2 1192 aa18.44■□□□□ 0.54
ALK-201ENST00000389048 CCDC18Q5T9S5 1454 aa18.44■□□□□ 0.54
ALK-201ENST00000389048 SSBP05455 408 aaKnown RBP eCLIP18.44■□□□□ 0.54
ALK-201ENST00000389048 CAMK4Q16566 473 aa18.44■□□□□ 0.54
ALK-201ENST00000389048 ZNF396Q96N95 335 aaPredicted RBP18.43■□□□□ 0.54
ALK-201ENST00000389048 MYL6BP14649 208 aa18.43■□□□□ 0.54
ALK-201ENST00000389048 STRN4Q9NRL3 753 aa18.43■□□□□ 0.54
ALK-201ENST00000389048 ZNHIT6Q9NWK9 470 aaKnown RBP18.43■□□□□ 0.54
ALK-201ENST00000389048 MATR3P43243 847 aaKnown RBP eCLIP18.43■□□□□ 0.54
ALK-201ENST00000389048 CCDC102AQ96A19 550 aa18.43■□□□□ 0.54
ALK-201ENST00000389048 AEBP1Q8IUX7 1158 aa18.42■□□□□ 0.54
ALK-201ENST00000389048 ERLIN2O94905 339 aa18.42■□□□□ 0.54
ALK-201ENST00000389048 UACAQ9BZF9 1416 aa18.42■□□□□ 0.54
ALK-201ENST00000389048 SSR1P43307 286 aaKnown RBP18.42■□□□□ 0.54
ALK-201ENST00000389048 MTHFSP49914 203 aa18.42■□□□□ 0.54
ALK-201ENST00000389048 KIF7Q2M1P5 1343 aa18.41■□□□□ 0.54
ALK-201ENST00000389048 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
ALK-201ENST00000389048 CCDC112Q8NEF3 446 aa18.41■□□□□ 0.54
ALK-201ENST00000389048 RBM5P52756 815 aaKnown RBP eCLIP18.41■□□□□ 0.54
ALK-201ENST00000389048 MTERF4Q7Z6M4 381 aaKnown RBP18.41■□□□□ 0.54
ALK-201ENST00000389048 CCDC69A6NI79 296 aa18.4■□□□□ 0.54
ALK-201ENST00000389048 GRPEL1Q9HAV7 217 aa18.4■□□□□ 0.54
ALK-201ENST00000389048 FKBP4Q02790 459 aaKnown RBP eCLIP18.39■□□□□ 0.54
ALK-201ENST00000389048 CCDC85AQ96PX6 553 aaPredicted RBP18.39■□□□□ 0.54
ALK-201ENST00000389048 FILIP1Q7Z7B0 1213 aa18.39■□□□□ 0.53
ALK-201ENST00000389048 TRERF1Q96PN7 1200 aa18.39■□□□□ 0.53
ALK-201ENST00000389048 CCDC192P0DO97 292 aa18.39■□□□□ 0.53
ALK-201ENST00000389048 NLRP6P59044 892 aa18.39■□□□□ 0.53
ALK-201ENST00000389048 CCP110O43303 1012 aa18.38■□□□□ 0.53
ALK-201ENST00000389048 RBM25P49756 843 aaKnown RBP18.38■□□□□ 0.53
ALK-201ENST00000389048 ZRSR2Q15696 482 aaKnown RBP18.38■□□□□ 0.53
ALK-201ENST00000389048 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
ALK-201ENST00000389048 CCDC97Q96F63 343 aaPredicted RBP18.38■□□□□ 0.53
ALK-201ENST00000389048 MBD3O95983 291 aa18.37■□□□□ 0.53
ALK-201ENST00000389048 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
ALK-201ENST00000389048 DNA2P51530 1060 aa18.37■□□□□ 0.53
ALK-201ENST00000389048 TCP11L2Q8N4U5 519 aa18.37■□□□□ 0.53
ALK-201ENST00000389048 CYP46A1Q9Y6A2 500 aa18.37■□□□□ 0.53
ALK-201ENST00000389048 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
ALK-201ENST00000389048 CWC27Q6UX04 472 aaKnown RBP18.37■□□□□ 0.53
ALK-201ENST00000389048 AKNAQ7Z591 1439 aa18.37■□□□□ 0.53
ALK-201ENST00000389048 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
ALK-201ENST00000389048 DDX11Q96FC9 970 aa18.37■□□□□ 0.53
ALK-201ENST00000389048 CHMP4BP1P59074 171 aa18.36■□□□□ 0.53
ALK-201ENST00000389048 CCDC113Q9H0I3 377 aa18.36■□□□□ 0.53
ALK-201ENST00000389048 ATF3P18847 181 aa18.36■□□□□ 0.53
ALK-201ENST00000389048 CBX1P83916 185 aa18.36■□□□□ 0.53
ALK-201ENST00000389048 TWISTNBQ3B726 338 aaPredicted RBP18.36■□□□□ 0.53
ALK-201ENST00000389048 SLC3A2P08195 630 aaKnown RBP18.36■□□□□ 0.53
ALK-201ENST00000389048 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms