RNA–Protein interactions for RNA: ENST00000384540.1

RNU6-601P-201, Transcript of RNA, U6 small nuclear 601, pseudogene, humanhuman

BASIC

Gene RNU6-601P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-601P-201ENST00000384540 CTHP32929 405 aa6.81□□□□□ -1.32
RNU6-601P-201ENST00000384540 NUTM2DQ5VT03 806 aaPredicted RBP6.81□□□□□ -1.32
RNU6-601P-201ENST00000384540 NUTM2AQ8IVF1 878 aaPredicted RBP6.81□□□□□ -1.32
RNU6-601P-201ENST00000384540 BAP1Q92560 729 aa6.81□□□□□ -1.32
RNU6-601P-201ENST00000384540 DDRGK1Q96HY6 314 aa6.81□□□□□ -1.32
RNU6-601P-201ENST00000384540 GPBP1L1Q9HC44 474 aaPredicted RBP6.81□□□□□ -1.32
RNU6-601P-201ENST00000384540 MAP10Q9P2G4 905 aa6.81□□□□□ -1.32
RNU6-601P-201ENST00000384540 PER1O15534 1290 aaPredicted RBP6.8□□□□□ -1.32
RNU6-601P-201ENST00000384540 SH3D19Q5HYK7 790 aa6.8□□□□□ -1.32
RNU6-601P-201ENST00000384540 HELBQ8NG08 1087 aaPredicted RBP6.8□□□□□ -1.32
RNU6-601P-201ENST00000384540 HPS1Q92902 700 aa6.8□□□□□ -1.32
RNU6-601P-201ENST00000384540 DACH1Q9UI36 760 aa6.8□□□□□ -1.32
RNU6-601P-201ENST00000384540 ALDH1A1P00352 501 aa6.79□□□□□ -1.32
RNU6-601P-201ENST00000384540 VARSP26640 1264 aaKnown RBP6.79□□□□□ -1.32
RNU6-601P-201ENST00000384540 RTL5Q5HYW3 569 aaPredicted RBP6.79□□□□□ -1.32
RNU6-601P-201ENST00000384540 MPNDQ8N594 471 aa6.79□□□□□ -1.32
RNU6-601P-201ENST00000384540 SKIV2LQ15477 1246 aaKnown RBP6.78□□□□□ -1.32
RNU6-601P-201ENST00000384540 TSC1Q92574 1164 aa6.78□□□□□ -1.32
RNU6-601P-201ENST00000384540 FAM117AQ9C073 453 aa6.78□□□□□ -1.32
RNU6-601P-201ENST00000384540 POLR3EQ9NVU0 708 aa6.78□□□□□ -1.32
RNU6-601P-201ENST00000384540 ZNF775Q96BV0 537 aaPredicted RBP6.77□□□□□ -1.33
RNU6-601P-201ENST00000384540 ATP13A2Q9NQ11 1180 aa6.77□□□□□ -1.33
RNU6-601P-201ENST00000384540 GMPR2Q9P2T1 348 aaKnown RBP6.77□□□□□ -1.33
RNU6-601P-201ENST00000384540 TLL2Q9Y6L7 1015 aa6.77□□□□□ -1.33
RNU6-601P-201ENST00000384540 WASF2Q9Y6W5 498 aa6.77□□□□□ -1.33
RNU6-601P-201ENST00000384540 PLEKHG3A1L390 1219 aa6.76□□□□□ -1.33
RNU6-601P-201ENST00000384540 ARMC2Q8NEN0 867 aa6.76□□□□□ -1.33
RNU6-601P-201ENST00000384540 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.76□□□□□ -1.33
RNU6-601P-201ENST00000384540 PPP2R2DQ66LE6 453 aa6.75□□□□□ -1.33
RNU6-601P-201ENST00000384540 FAM174AQ8TBP5 190 aa6.75□□□□□ -1.33
RNU6-601P-201ENST00000384540 FOXJ1Q92949 421 aa6.75□□□□□ -1.33
RNU6-601P-201ENST00000384540 NBPF14Q5TI25 921 aa6.74□□□□□ -1.33
RNU6-601P-201ENST00000384540 C11orf95C9JLR9 678 aaPredicted RBP6.73□□□□□ -1.33
RNU6-601P-201ENST00000384540 C4orf48Q5BLP8 95 aa6.73□□□□□ -1.33
RNU6-601P-201ENST00000384540 FBXO31Q5XUX0 539 aaPredicted RBP6.73□□□□□ -1.33
RNU6-601P-201ENST00000384540 SH3RF1Q7Z6J0 888 aa6.73□□□□□ -1.33
RNU6-601P-201ENST00000384540 BPHLQ86WA6 291 aaPredicted RBP6.73□□□□□ -1.33
RNU6-601P-201ENST00000384540 TRIM47Q96LD4 638 aa6.73□□□□□ -1.33
RNU6-601P-201ENST00000384540 CDK15Q96Q40 435 aa6.73□□□□□ -1.33
RNU6-601P-201ENST00000384540 C1QTNF2Q9BXJ5 285 aa6.73□□□□□ -1.33
RNU6-601P-201ENST00000384540 SENP2Q9HC62 589 aa6.73□□□□□ -1.33
RNU6-601P-201ENST00000384540 CTDSPL2Q05D32 466 aa6.72□□□□□ -1.33
RNU6-601P-201ENST00000384540 NNTQ13423 1086 aa6.72□□□□□ -1.33
RNU6-601P-201ENST00000384540 SH3BP5LQ7L8J4 393 aa6.72□□□□□ -1.33
RNU6-601P-201ENST00000384540 PROCA1Q8NCQ7 364 aaPredicted RBP6.72□□□□□ -1.33
RNU6-601P-201ENST00000384540 GPKOWQ92917 476 aaPredicted RBP eCLIP6.72□□□□□ -1.33
RNU6-601P-201ENST00000384540 CAPN5O15484 640 aaPredicted RBP6.71□□□□□ -1.34
RNU6-601P-201ENST00000384540 ADH1CP00326 375 aa6.71□□□□□ -1.34
RNU6-601P-201ENST00000384540 KIFC2Q96AC6 838 aa6.71□□□□□ -1.34
RNU6-601P-201ENST00000384540 AGERQ15109 404 aa6.7□□□□□ -1.34
RNU6-601P-201ENST00000384540 TRIM46Q7Z4K8 759 aa6.7□□□□□ -1.34
RNU6-601P-201ENST00000384540 TRMT44Q8IYL2 757 aaKnown RBP6.7□□□□□ -1.34
RNU6-601P-201ENST00000384540 GOPCQ9HD26 462 aa6.7□□□□□ -1.34
RNU6-601P-201ENST00000384540 TIMP2P16035 220 aa6.69□□□□□ -1.34
RNU6-601P-201ENST00000384540 LRRN4Q8WUT4 740 aa6.69□□□□□ -1.34
RNU6-601P-201ENST00000384540 MAP4K5Q9Y4K4 846 aa6.69□□□□□ -1.34
RNU6-601P-201ENST00000384540 ZC3H4Q9UPT8 1303 aaKnown RBP6.69□□□□□ -1.34
RNU6-601P-201ENST00000384540 BMP1P13497 986 aa6.68□□□□□ -1.34
RNU6-601P-201ENST00000384540 SNRPBP14678 240 aaKnown RBP6.68□□□□□ -1.34
RNU6-601P-201ENST00000384540 NR5A1Q13285 461 aa6.68□□□□□ -1.34
RNU6-601P-201ENST00000384540 NEUROD2Q15784 382 aa6.68□□□□□ -1.34
RNU6-601P-201ENST00000384540 KLF16Q9BXK1 252 aaPredicted RBP6.68□□□□□ -1.34
RNU6-601P-201ENST00000384540 WDR4P57081 412 aaKnown RBP6.67□□□□□ -1.34
RNU6-601P-201ENST00000384540 ARID5BQ14865 1188 aa6.67□□□□□ -1.34
RNU6-601P-201ENST00000384540 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
RNU6-601P-201ENST00000384540 PDXDC2PQ6P474 469 aa6.67□□□□□ -1.34
RNU6-601P-201ENST00000384540 TREML4Q6UXN2 200 aa6.67□□□□□ -1.34
RNU6-601P-201ENST00000384540 FKBPLQ9UIM3 349 aa6.67□□□□□ -1.34
RNU6-601P-201ENST00000384540 AP1G2O75843 785 aa6.66□□□□□ -1.34
RNU6-601P-201ENST00000384540 USP17L8P0C7I0 530 aa6.66□□□□□ -1.34
RNU6-601P-201ENST00000384540 RFC5P40937 340 aa6.66□□□□□ -1.34
RNU6-601P-201ENST00000384540 GRM5P41594 1212 aa6.66□□□□□ -1.34
RNU6-601P-201ENST00000384540 ATP1B4Q9UN42 357 aaPredicted RBP6.66□□□□□ -1.34
RNU6-601P-201ENST00000384540 MAGEB6P1A0A0J9YX57 407 aa6.65□□□□□ -1.34
RNU6-601P-201ENST00000384540 NR3C2P08235 984 aa6.65□□□□□ -1.34
RNU6-601P-201ENST00000384540 FSHRP23945 695 aa6.65□□□□□ -1.34
RNU6-601P-201ENST00000384540 BRPF1P55201 1214 aaPredicted RBP6.65□□□□□ -1.34
RNU6-601P-201ENST00000384540 NR6A1Q15406 480 aa6.65□□□□□ -1.34
RNU6-601P-201ENST00000384540 ERFEQ4G0M1 354 aa6.65□□□□□ -1.34
RNU6-601P-201ENST00000384540 PCMTD1Q96MG8 357 aaPredicted RBP6.65□□□□□ -1.34
RNU6-601P-201ENST00000384540 NFX1Q12986 1120 aaKnown RBP6.64□□□□□ -1.35
RNU6-601P-201ENST00000384540 MRPL14Q6P1L8 145 aaKnown RBP6.64□□□□□ -1.35
RNU6-601P-201ENST00000384540 ARHGAP9Q9BRR9 750 aa6.64□□□□□ -1.35
RNU6-601P-201ENST00000384540 CARD14Q9BXL6 1004 aa6.64□□□□□ -1.35
RNU6-601P-201ENST00000384540 WFS1O76024 890 aa6.63□□□□□ -1.35
RNU6-601P-201ENST00000384540 ZIC2O95409 532 aaPredicted RBP6.63□□□□□ -1.35
RNU6-601P-201ENST00000384540 VASH1Q7L8A9 365 aaPredicted RBP6.63□□□□□ -1.35
RNU6-601P-201ENST00000384540 ITPKCQ96DU7 683 aa6.63□□□□□ -1.35
RNU6-601P-201ENST00000384540 ZFP42Q96MM3 310 aa6.63□□□□□ -1.35
RNU6-601P-201ENST00000384540 ZFAND3Q9H8U3 227 aa6.63□□□□□ -1.35
RNU6-601P-201ENST00000384540 HMX1Q9NP08 348 aaPredicted RBP6.63□□□□□ -1.35
RNU6-601P-201ENST00000384540 GPSM3Q9Y4H4 160 aa6.63□□□□□ -1.35
RNU6-601P-201ENST00000384540 SCARF1Q14162 830 aa6.62□□□□□ -1.35
RNU6-601P-201ENST00000384540 PNMA1Q8ND90 353 aa6.62□□□□□ -1.35
RNU6-601P-201ENST00000384540 SLC10A4Q96EP9 437 aa6.62□□□□□ -1.35
RNU6-601P-201ENST00000384540 CDV3Q9UKY7 258 aaKnown RBP6.62□□□□□ -1.35
RNU6-601P-201ENST00000384540 TERTO14746 1132 aaKnown RBP6.61□□□□□ -1.35
RNU6-601P-201ENST00000384540 TMEM259Q4ZIN3 620 aa6.61□□□□□ -1.35
RNU6-601P-201ENST00000384540 CCDC116Q8IYX3 515 aa6.61□□□□□ -1.35
RNU6-601P-201ENST00000384540 MEIOBQ8N635 442 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms