RNA–Protein interactions for RNA: ENST00000380232.3

IFNB1-201, Transcript of interferon beta 1, humanhuman

APPRIS P1 BASIC

Gene IFNB1, Length 859 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1-201ENST00000380232 PROCA1Q8NCQ7 364 aaPredicted RBP12.53□□□□□ -0.4
IFNB1-201ENST00000380232 SNIP1Q8TAD8 396 aaKnown RBP12.53□□□□□ -0.4
IFNB1-201ENST00000380232 MAP10Q9P2G4 905 aa12.53□□□□□ -0.4
IFNB1-201ENST00000380232 ATP1B4Q9UN42 357 aaPredicted RBP12.53□□□□□ -0.4
IFNB1-201ENST00000380232 SH3BP2P78314 561 aa12.52□□□□□ -0.41
IFNB1-201ENST00000380232 BAP1Q92560 729 aa12.52□□□□□ -0.41
IFNB1-201ENST00000380232 F12P00748 615 aaPredicted RBP12.51□□□□□ -0.41
IFNB1-201ENST00000380232 HELBQ8NG08 1087 aaPredicted RBP12.51□□□□□ -0.41
IFNB1-201ENST00000380232 BRPF1P55201 1214 aaPredicted RBP12.49□□□□□ -0.41
IFNB1-201ENST00000380232 FBXO31Q5XUX0 539 aaPredicted RBP12.49□□□□□ -0.41
IFNB1-201ENST00000380232 EHBP1Q8NDI1 1231 aa12.49□□□□□ -0.41
IFNB1-201ENST00000380232 J3QL48 77 aa12.48□□□□□ -0.41
IFNB1-201ENST00000380232 SMPD1P17405 629 aa12.48□□□□□ -0.41
IFNB1-201ENST00000380232 ZNF511Q8NB15 262 aa12.48□□□□□ -0.41
IFNB1-201ENST00000380232 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.48□□□□□ -0.41
IFNB1-201ENST00000380232 ST8SIA5O15466 376 aa12.47□□□□□ -0.41
IFNB1-201ENST00000380232 IL27Q8NEV9 243 aa12.46□□□□□ -0.41
IFNB1-201ENST00000380232 AVPP01185 164 aa12.44□□□□□ -0.42
IFNB1-201ENST00000380232 CTDSPL2Q05D32 466 aa12.44□□□□□ -0.42
IFNB1-201ENST00000380232 AAASQ9NRG9 546 aa12.44□□□□□ -0.42
IFNB1-201ENST00000380232 SIAH2O43255 324 aa12.43□□□□□ -0.42
IFNB1-201ENST00000380232 ALDH1A1P00352 501 aa12.43□□□□□ -0.42
IFNB1-201ENST00000380232 PPP2R2DQ66LE6 453 aa12.43□□□□□ -0.42
IFNB1-201ENST00000380232 CRIPAKQ8N1N5 446 aa12.4□□□□□ -0.42
IFNB1-201ENST00000380232 HPS1Q92902 700 aa12.4□□□□□ -0.42
IFNB1-201ENST00000380232 FOXJ1Q92949 421 aa12.4□□□□□ -0.42
IFNB1-201ENST00000380232 AXIN1O15169 862 aa12.39□□□□□ -0.43
IFNB1-201ENST00000380232 VARSP26640 1264 aaKnown RBP12.39□□□□□ -0.43
IFNB1-201ENST00000380232 ZNF787Q6DD87 383 aa12.39□□□□□ -0.43
IFNB1-201ENST00000380232 LRRN4Q8WUT4 740 aa12.39□□□□□ -0.43
IFNB1-201ENST00000380232 PCMTD1Q96MG8 357 aaPredicted RBP12.39□□□□□ -0.43
IFNB1-201ENST00000380232 GOPCQ9HD26 462 aa12.39□□□□□ -0.43
IFNB1-201ENST00000380232 TLL2Q9Y6L7 1015 aa12.39□□□□□ -0.43
IFNB1-201ENST00000380232 AP1G2O75843 785 aa12.38□□□□□ -0.43
IFNB1-201ENST00000380232 CTC1Q2NKJ3 1217 aa12.38□□□□□ -0.43
IFNB1-201ENST00000380232 ARMC2Q8NEN0 867 aa12.37□□□□□ -0.43
IFNB1-201ENST00000380232 DACH1Q9UI36 760 aa12.37□□□□□ -0.43
IFNB1-201ENST00000380232 SMCPP49901 116 aaPredicted RBP12.36□□□□□ -0.43
IFNB1-201ENST00000380232 AGERQ15109 404 aa12.36□□□□□ -0.43
IFNB1-201ENST00000380232 WASF2Q9Y6W5 498 aa12.36□□□□□ -0.43
IFNB1-201ENST00000380232 POTECB2RU33 542 aa12.35□□□□□ -0.43
IFNB1-201ENST00000380232 PRKCSHP14314 528 aaPredicted RBP12.35□□□□□ -0.43
IFNB1-201ENST00000380232 RFC5P40937 340 aa12.34□□□□□ -0.43
IFNB1-201ENST00000380232 C4orf48Q5BLP8 95 aa12.34□□□□□ -0.43
IFNB1-201ENST00000380232 NBPF14Q5TI25 921 aa12.34□□□□□ -0.43
IFNB1-201ENST00000380232 FAM174AQ8TBP5 190 aa12.34□□□□□ -0.43
IFNB1-201ENST00000380232 NR6A1Q15406 480 aa12.32□□□□□ -0.44
IFNB1-201ENST00000380232 BPHLQ86WA6 291 aaPredicted RBP12.32□□□□□ -0.44
IFNB1-201ENST00000380232 USP17L8P0C7I0 530 aa12.31□□□□□ -0.44
IFNB1-201ENST00000380232 MPNDQ8N594 471 aa12.3□□□□□ -0.44
IFNB1-201ENST00000380232 ARID5BQ14865 1188 aa12.29□□□□□ -0.44
IFNB1-201ENST00000380232 SH3BP5LQ7L8J4 393 aa12.29□□□□□ -0.44
IFNB1-201ENST00000380232 FKBPLQ9UIM3 349 aa12.29□□□□□ -0.44
IFNB1-201ENST00000380232 SH3RF1Q7Z6J0 888 aa12.28□□□□□ -0.44
IFNB1-201ENST00000380232 HMX1Q9NP08 348 aaPredicted RBP12.28□□□□□ -0.44
IFNB1-201ENST00000380232 MAGEB6P1A0A0J9YX57 407 aa12.27□□□□□ -0.45
IFNB1-201ENST00000380232 GPKOWQ92917 476 aaPredicted RBP eCLIP12.27□□□□□ -0.45
IFNB1-201ENST00000380232 GMPR2Q9P2T1 348 aaKnown RBP12.27□□□□□ -0.45
IFNB1-201ENST00000380232 ADH1CP00326 375 aa12.26□□□□□ -0.45
IFNB1-201ENST00000380232 NNTQ13423 1086 aa12.26□□□□□ -0.45
IFNB1-201ENST00000380232 EPS8L1Q8TE68 723 aa12.26□□□□□ -0.45
IFNB1-201ENST00000380232 CDK15Q96Q40 435 aa12.26□□□□□ -0.45
IFNB1-201ENST00000380232 C1QTNF2Q9BXJ5 285 aa12.26□□□□□ -0.45
IFNB1-201ENST00000380232 CARD14Q9BXL6 1004 aa12.26□□□□□ -0.45
IFNB1-201ENST00000380232 ATP13A2Q9NQ11 1180 aa12.26□□□□□ -0.45
IFNB1-201ENST00000380232 TMEM259Q4ZIN3 620 aa12.25□□□□□ -0.45
IFNB1-201ENST00000380232 CAPN5O15484 640 aaPredicted RBP12.23□□□□□ -0.45
IFNB1-201ENST00000380232 PDXDC2PQ6P474 469 aa12.23□□□□□ -0.45
IFNB1-201ENST00000380232 ZC3H4Q9UPT8 1303 aaKnown RBP12.22□□□□□ -0.45
IFNB1-201ENST00000380232 ARHGAP9Q9BRR9 750 aa12.22□□□□□ -0.45
IFNB1-201ENST00000380232 C11orf95C9JLR9 678 aaPredicted RBP12.2□□□□□ -0.46
IFNB1-201ENST00000380232 GRM5P41594 1212 aa12.2□□□□□ -0.46
IFNB1-201ENST00000380232 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
IFNB1-201ENST00000380232 TRMT44Q8IYL2 757 aaKnown RBP12.2□□□□□ -0.46
IFNB1-201ENST00000380232 BMP1P13497 986 aa12.19□□□□□ -0.46
IFNB1-201ENST00000380232 WDR4P57081 412 aaKnown RBP12.19□□□□□ -0.46
IFNB1-201ENST00000380232 NR5A1Q13285 461 aa12.19□□□□□ -0.46
IFNB1-201ENST00000380232 NR3C2P08235 984 aa12.18□□□□□ -0.46
IFNB1-201ENST00000380232 VASH1Q7L8A9 365 aaPredicted RBP12.18□□□□□ -0.46
IFNB1-201ENST00000380232 PNMA1Q8ND90 353 aa12.18□□□□□ -0.46
IFNB1-201ENST00000380232 ZNF775Q96BV0 537 aaPredicted RBP12.18□□□□□ -0.46
IFNB1-201ENST00000380232 TRIM34Q9BYJ4 488 aa12.18□□□□□ -0.46
IFNB1-201ENST00000380232 TIMP2P16035 220 aa12.17□□□□□ -0.46
IFNB1-201ENST00000380232 FSHRP23945 695 aa12.17□□□□□ -0.46
IFNB1-201ENST00000380232 PTK2Q05397 1052 aa12.17□□□□□ -0.46
IFNB1-201ENST00000380232 ZBTB33Q86T24 672 aa12.17□□□□□ -0.46
IFNB1-201ENST00000380232 OCSTAMPQ9BR26 566 aa12.17□□□□□ -0.46
IFNB1-201ENST00000380232 MAP4K5Q9Y4K4 846 aa12.17□□□□□ -0.46
IFNB1-201ENST00000380232 TRIM46Q7Z4K8 759 aa12.16□□□□□ -0.46
IFNB1-201ENST00000380232 KLF16Q9BXK1 252 aaPredicted RBP12.16□□□□□ -0.46
IFNB1-201ENST00000380232 SENP2Q9HC62 589 aa12.16□□□□□ -0.46
IFNB1-201ENST00000380232 SNRPBP14678 240 aaKnown RBP12.15□□□□□ -0.46
IFNB1-201ENST00000380232 SLC10A4Q96EP9 437 aa12.14□□□□□ -0.47
IFNB1-201ENST00000380232 TRIM47Q96LD4 638 aa12.14□□□□□ -0.47
IFNB1-201ENST00000380232 ZFAND3Q9H8U3 227 aa12.14□□□□□ -0.47
IFNB1-201ENST00000380232 GPSM3Q9Y4H4 160 aa12.14□□□□□ -0.47
IFNB1-201ENST00000380232 ZIC2O95409 532 aaPredicted RBP12.13□□□□□ -0.47
IFNB1-201ENST00000380232 ADAM32Q8TC27 787 aa12.13□□□□□ -0.47
IFNB1-201ENST00000380232 ITPKCQ96DU7 683 aa12.13□□□□□ -0.47
IFNB1-201ENST00000380232 GJD4Q96KN9 370 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms