RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 ANKRD13AQ8IZ07 590 aa10.41□□□□□ -0.74
ABCA1-202ENST00000374736 POTEB2H3BUK9 544 aa10.41□□□□□ -0.74
ABCA1-202ENST00000374736 POLD1P28340 1107 aa10.41□□□□□ -0.74
ABCA1-202ENST00000374736 TMCO3Q6UWJ1 677 aa10.41□□□□□ -0.74
ABCA1-202ENST00000374736 CENPQQ7L2Z9 268 aaPredicted RBP10.41□□□□□ -0.74
ABCA1-202ENST00000374736 RNF8O76064 485 aa10.4□□□□□ -0.74
ABCA1-202ENST00000374736 SLC20A2Q08357 652 aa10.4□□□□□ -0.74
ABCA1-202ENST00000374736 PDCD7Q8N8D1 485 aaKnown RBP10.4□□□□□ -0.74
ABCA1-202ENST00000374736 PAXBP1Q9Y5B6 917 aa10.4□□□□□ -0.74
ABCA1-202ENST00000374736 WHAMMP3Q1A5X7 153 aa10.4□□□□□ -0.74
ABCA1-202ENST00000374736 MAP9Q49MG5 647 aa10.4□□□□□ -0.74
ABCA1-202ENST00000374736 DTNBP1Q96EV8 351 aa10.4□□□□□ -0.74
ABCA1-202ENST00000374736 IBSPP21815 317 aaPredicted RBP10.4□□□□□ -0.74
ABCA1-202ENST00000374736 MSL3Q8N5Y2 521 aaKnown RBP10.4□□□□□ -0.74
ABCA1-202ENST00000374736 CEP135Q66GS9 1140 aa10.4□□□□□ -0.74
ABCA1-202ENST00000374736 IQCGQ9H095 443 aaKnown RBP10.4□□□□□ -0.75
ABCA1-202ENST00000374736 SPAG9O60271 1321 aaKnown RBP10.39□□□□□ -0.75
ABCA1-202ENST00000374736 EIF3AQ14152 1382 aaKnown RBP10.39□□□□□ -0.75
ABCA1-202ENST00000374736 FILIP1Q7Z7B0 1213 aa10.39□□□□□ -0.75
ABCA1-202ENST00000374736 SAFB2Q14151 953 aaKnown RBP eCLIP10.39□□□□□ -0.75
ABCA1-202ENST00000374736 STAC3Q96MF2 364 aa10.39□□□□□ -0.75
ABCA1-202ENST00000374736 SH3BP5O60239 455 aa10.39□□□□□ -0.75
ABCA1-202ENST00000374736 BAG4O95429 457 aaKnown RBP10.39□□□□□ -0.75
ABCA1-202ENST00000374736 RGS22Q8NE09 1264 aa10.39□□□□□ -0.75
ABCA1-202ENST00000374736 SMC1AQ14683 1233 aaKnown RBP10.39□□□□□ -0.75
ABCA1-202ENST00000374736 WASHC2AQ641Q2 1341 aa10.39□□□□□ -0.75
ABCA1-202ENST00000374736 FMNL2Q96PY5 1086 aa10.39□□□□□ -0.75
ABCA1-202ENST00000374736 MKRN1Q9UHC7 482 aaKnown RBP10.39□□□□□ -0.75
ABCA1-202ENST00000374736 SMC2O95347 1197 aa10.39□□□□□ -0.75
ABCA1-202ENST00000374736 PPFIBP2Q8ND30 876 aa10.39□□□□□ -0.75
ABCA1-202ENST00000374736 NLRP5P59047 1200 aa10.39□□□□□ -0.75
ABCA1-202ENST00000374736 RSPH14Q9UHP6 348 aa10.38□□□□□ -0.75
ABCA1-202ENST00000374736 ST18O60284 1047 aa10.38□□□□□ -0.75
ABCA1-202ENST00000374736 ZBED9Q6R2W3 1325 aa10.38□□□□□ -0.75
ABCA1-202ENST00000374736 SLMAPQ14BN4 828 aa10.38□□□□□ -0.75
ABCA1-202ENST00000374736 RPAP2Q8IXW5 612 aaPredicted RBP10.38□□□□□ -0.75
ABCA1-202ENST00000374736 WDR70Q9NW82 654 aa10.38□□□□□ -0.75
ABCA1-202ENST00000374736 MCM6Q14566 821 aa10.38□□□□□ -0.75
ABCA1-202ENST00000374736 OFD1O75665 1012 aa10.38□□□□□ -0.75
ABCA1-202ENST00000374736 CRACR2AQ9BSW2 395 aa10.38□□□□□ -0.75
ABCA1-202ENST00000374736 NAA16Q6N069 864 aaPredicted RBP10.38□□□□□ -0.75
ABCA1-202ENST00000374736 CEP112Q8N8E3 955 aa10.37□□□□□ -0.75
ABCA1-202ENST00000374736 NBPF7P0C2Y1 421 aaPredicted RBP10.37□□□□□ -0.75
ABCA1-202ENST00000374736 EXOC8Q8IYI6 725 aa10.37□□□□□ -0.75
ABCA1-202ENST00000374736 LUC7L3O95232 432 aaKnown RBP10.37□□□□□ -0.75
ABCA1-202ENST00000374736 DNAJC8O75937 253 aaPredicted RBP10.37□□□□□ -0.75
ABCA1-202ENST00000374736 NEBLO76041 1014 aa10.37□□□□□ -0.75
ABCA1-202ENST00000374736 ROCK1Q13464 1354 aa10.37□□□□□ -0.75
ABCA1-202ENST00000374736 CFAP57Q96MR6 1250 aa10.36□□□□□ -0.75
ABCA1-202ENST00000374736 ZFYP08048 801 aaPredicted RBP10.36□□□□□ -0.75
ABCA1-202ENST00000374736 ZNF365Q70YC5 407 aa10.36□□□□□ -0.75
ABCA1-202ENST00000374736 HOMER1Q86YM7 354 aa10.36□□□□□ -0.75
ABCA1-202ENST00000374736 TRIM21P19474 475 aaKnown RBP10.36□□□□□ -0.75
ABCA1-202ENST00000374736 WHAMMQ8TF30 809 aa10.36□□□□□ -0.75
ABCA1-202ENST00000374736 ZNF513Q8N8E2 541 aaPredicted RBP10.36□□□□□ -0.75
ABCA1-202ENST00000374736 TRAK2O60296 914 aa10.36□□□□□ -0.75
ABCA1-202ENST00000374736 USP6NLQ92738 828 aa10.36□□□□□ -0.75
ABCA1-202ENST00000374736 ZFXP17010 805 aaPredicted RBP10.36□□□□□ -0.75
ABCA1-202ENST00000374736 ICE2Q659A1 982 aa10.36□□□□□ -0.75
ABCA1-202ENST00000374736 CT47B1P0C2W7 299 aaPredicted RBP10.35□□□□□ -0.75
ABCA1-202ENST00000374736 PDE3BQ13370 1112 aa10.35□□□□□ -0.75
ABCA1-202ENST00000374736 WDR63Q8IWG1 891 aa10.35□□□□□ -0.75
ABCA1-202ENST00000374736 NAT10Q9H0A0 1025 aaKnown RBP10.35□□□□□ -0.75
ABCA1-202ENST00000374736 CLASRPQ8N2M8 674 aaKnown RBP10.35□□□□□ -0.75
ABCA1-202ENST00000374736 CHCHD3Q9NX63 227 aaKnown RBP10.35□□□□□ -0.75
ABCA1-202ENST00000374736 USP25Q9UHP3 1055 aa10.35□□□□□ -0.75
ABCA1-202ENST00000374736 USH1CQ9Y6N9 552 aa10.35□□□□□ -0.75
ABCA1-202ENST00000374736 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
ABCA1-202ENST00000374736 OTUD6BQ8N6M0 293 aa10.35□□□□□ -0.75
ABCA1-202ENST00000374736 PIK3R5Q8WYR1 880 aa10.35□□□□□ -0.75
ABCA1-202ENST00000374736 NUCB1Q02818 461 aa10.34□□□□□ -0.75
ABCA1-202ENST00000374736 CCDC114Q96M63 670 aa10.34□□□□□ -0.75
ABCA1-202ENST00000374736 CCDC146Q8IYE0 955 aa10.34□□□□□ -0.75
ABCA1-202ENST00000374736 CHMP4CQ96CF2 233 aa10.34□□□□□ -0.75
ABCA1-202ENST00000374736 NUB1Q9Y5A7 615 aa10.34□□□□□ -0.75
ABCA1-202ENST00000374736 DESP17661 470 aa10.34□□□□□ -0.75
ABCA1-202ENST00000374736 SREK1Q8WXA9 508 aaKnown RBP10.34□□□□□ -0.75
ABCA1-202ENST00000374736 SOX12O15370 315 aa10.34□□□□□ -0.75
ABCA1-202ENST00000374736 SPATS2Q86XZ4 545 aaKnown RBP10.34□□□□□ -0.75
ABCA1-202ENST00000374736 TOMM22Q9NS69 142 aa10.34□□□□□ -0.75
ABCA1-202ENST00000374736 IKBKGQ9Y6K9 419 aa10.34□□□□□ -0.75
ABCA1-202ENST00000374736 PPP1R12AO14974 1030 aaPredicted RBP10.34□□□□□ -0.75
ABCA1-202ENST00000374736 CCDC27Q2M243 656 aa10.34□□□□□ -0.75
ABCA1-202ENST00000374736 RBM33Q96EV2 1170 aaKnown RBP10.34□□□□□ -0.75
ABCA1-202ENST00000374736 ROCK2O75116 1388 aaKnown RBP10.33□□□□□ -0.76
ABCA1-202ENST00000374736 KIF7Q2M1P5 1343 aa10.33□□□□□ -0.76
ABCA1-202ENST00000374736 CEP128Q6ZU80 1094 aa10.33□□□□□ -0.76
ABCA1-202ENST00000374736 SKILP12757 684 aa10.33□□□□□ -0.76
ABCA1-202ENST00000374736 LRRCC1Q9C099 1032 aa10.33□□□□□ -0.76
ABCA1-202ENST00000374736 HSPA4P34932 840 aa10.33□□□□□ -0.76
ABCA1-202ENST00000374736 MPP4Q96JB8 637 aa10.33□□□□□ -0.76
ABCA1-202ENST00000374736 GCKP35557 465 aa10.33□□□□□ -0.76
ABCA1-202ENST00000374736 RINLQ6ZS11 566 aa10.33□□□□□ -0.76
ABCA1-202ENST00000374736 KIF2CQ99661 725 aa10.33□□□□□ -0.76
ABCA1-202ENST00000374736 KIF5BP33176 963 aa10.33□□□□□ -0.76
ABCA1-202ENST00000374736 GTF2F1P35269 517 aaKnown RBP eCLIP10.33□□□□□ -0.76
ABCA1-202ENST00000374736 TUBBP07437 444 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 PPP2R5AQ15172 486 aa10.32□□□□□ -0.76
ABCA1-202ENST00000374736 CCAR1Q8IX12 1150 aaKnown RBP10.32□□□□□ -0.76
ABCA1-202ENST00000374736 PSMC1P62191 440 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms