RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 QPCTQ16769 361 aa7.91□□□□□ -1.14
LRRC39-203ENST00000370138 ATP13A2Q9NQ11 1180 aa7.91□□□□□ -1.14
LRRC39-203ENST00000370138 C11orf95C9JLR9 678 aaPredicted RBP7.9□□□□□ -1.14
LRRC39-203ENST00000370138 INSM1Q01101 510 aaPredicted RBP7.9□□□□□ -1.14
LRRC39-203ENST00000370138 PRPF38BQ5VTL8 546 aaKnown RBP7.89□□□□□ -1.15
LRRC39-203ENST00000370138 ZNF511Q8NB15 262 aa7.89□□□□□ -1.15
LRRC39-203ENST00000370138 MAP10Q9P2G4 905 aa7.89□□□□□ -1.15
LRRC39-203ENST00000370138 PER1O15534 1290 aaPredicted RBP7.88□□□□□ -1.15
LRRC39-203ENST00000370138 CTHP32929 405 aa7.88□□□□□ -1.15
LRRC39-203ENST00000370138 TLL2Q9Y6L7 1015 aa7.88□□□□□ -1.15
LRRC39-203ENST00000370138 F12P00748 615 aaPredicted RBP7.87□□□□□ -1.15
LRRC39-203ENST00000370138 SNRPBP14678 240 aaKnown RBP7.87□□□□□ -1.15
LRRC39-203ENST00000370138 LILRB3O75022 631 aa7.87□□□□□ -1.15
LRRC39-203ENST00000370138 WIPF1O43516 503 aa7.86□□□□□ -1.15
LRRC39-203ENST00000370138 RTL5Q5HYW3 569 aaPredicted RBP7.86□□□□□ -1.15
LRRC39-203ENST00000370138 TSC1Q92574 1164 aa7.86□□□□□ -1.15
LRRC39-203ENST00000370138 WASF2Q9Y6W5 498 aa7.86□□□□□ -1.15
LRRC39-203ENST00000370138 NUTM2BA6NNL0 878 aaPredicted RBP7.85□□□□□ -1.15
LRRC39-203ENST00000370138 NUTM2EB1AL46 878 aaPredicted RBP7.85□□□□□ -1.15
LRRC39-203ENST00000370138 TUSC1Q2TAM9 212 aa7.85□□□□□ -1.15
LRRC39-203ENST00000370138 NUTM2DQ5VT03 806 aaPredicted RBP7.85□□□□□ -1.15
LRRC39-203ENST00000370138 NUTM2AQ8IVF1 878 aaPredicted RBP7.85□□□□□ -1.15
LRRC39-203ENST00000370138 POLR3EQ9NVU0 708 aa7.85□□□□□ -1.15
LRRC39-203ENST00000370138 VARSP26640 1264 aaKnown RBP7.84□□□□□ -1.15
LRRC39-203ENST00000370138 FOXJ1Q92949 421 aa7.84□□□□□ -1.15
LRRC39-203ENST00000370138 TRIM47Q96LD4 638 aa7.84□□□□□ -1.15
LRRC39-203ENST00000370138 BMP1P13497 986 aa7.83□□□□□ -1.16
LRRC39-203ENST00000370138 CLK2P49760 499 aaKnown RBP7.83□□□□□ -1.16
LRRC39-203ENST00000370138 C4orf48Q5BLP8 95 aa7.82□□□□□ -1.16
LRRC39-203ENST00000370138 TRIM46Q7Z4K8 759 aa7.82□□□□□ -1.16
LRRC39-203ENST00000370138 GPBP1L1Q9HC44 474 aaPredicted RBP7.82□□□□□ -1.16
LRRC39-203ENST00000370138 CAPN5O15484 640 aaPredicted RBP7.81□□□□□ -1.16
LRRC39-203ENST00000370138 WFS1O76024 890 aa7.81□□□□□ -1.16
LRRC39-203ENST00000370138 FBXO31Q5XUX0 539 aaPredicted RBP7.81□□□□□ -1.16
LRRC39-203ENST00000370138 MPNDQ8N594 471 aa7.81□□□□□ -1.16
LRRC39-203ENST00000370138 SENP2Q9HC62 589 aa7.81□□□□□ -1.16
LRRC39-203ENST00000370138 NFX1Q12986 1120 aaKnown RBP7.8□□□□□ -1.16
LRRC39-203ENST00000370138 NNTQ13423 1086 aa7.8□□□□□ -1.16
LRRC39-203ENST00000370138 RSPH6AQ9H0K4 717 aa7.8□□□□□ -1.16
LRRC39-203ENST00000370138 KDM4CQ9H3R0 1056 aa7.8□□□□□ -1.16
LRRC39-203ENST00000370138 PLEKHG3A1L390 1219 aa7.79□□□□□ -1.16
LRRC39-203ENST00000370138 LCE2CQ5TA81 110 aa7.79□□□□□ -1.16
LRRC39-203ENST00000370138 FAM174AQ8TBP5 190 aa7.79□□□□□ -1.16
LRRC39-203ENST00000370138 BCANQ96GW7 911 aa7.79□□□□□ -1.16
LRRC39-203ENST00000370138 FAM117AQ9C073 453 aa7.79□□□□□ -1.16
LRRC39-203ENST00000370138 HELBQ8NG08 1087 aaPredicted RBP7.78□□□□□ -1.16
LRRC39-203ENST00000370138 KIFC2Q96AC6 838 aa7.78□□□□□ -1.16
LRRC39-203ENST00000370138 ADH1CP00326 375 aa7.77□□□□□ -1.17
LRRC39-203ENST00000370138 CTDSPL2Q05D32 466 aa7.77□□□□□ -1.17
LRRC39-203ENST00000370138 ARID5BQ14865 1188 aa7.77□□□□□ -1.17
LRRC39-203ENST00000370138 AGERQ15109 404 aa7.77□□□□□ -1.17
LRRC39-203ENST00000370138 PROCA1Q8NCQ7 364 aaPredicted RBP7.77□□□□□ -1.17
LRRC39-203ENST00000370138 CDK15Q96Q40 435 aa7.77□□□□□ -1.17
LRRC39-203ENST00000370138 TIMP2P16035 220 aa7.76□□□□□ -1.17
LRRC39-203ENST00000370138 KLF16Q9BXK1 252 aaPredicted RBP7.76□□□□□ -1.17
LRRC39-203ENST00000370138 NR3C2P08235 984 aa7.75□□□□□ -1.17
LRRC39-203ENST00000370138 WDR4P57081 412 aaKnown RBP7.75□□□□□ -1.17
LRRC39-203ENST00000370138 SH3RF1Q7Z6J0 888 aa7.75□□□□□ -1.17
LRRC39-203ENST00000370138 BPHLQ86WA6 291 aaPredicted RBP7.75□□□□□ -1.17
LRRC39-203ENST00000370138 TERTO14746 1132 aaKnown RBP7.75□□□□□ -1.17
LRRC39-203ENST00000370138 GRM5P41594 1212 aa7.75□□□□□ -1.17
LRRC39-203ENST00000370138 SKIV2LQ15477 1246 aaKnown RBP7.75□□□□□ -1.17
LRRC39-203ENST00000370138 SH3D19Q5HYK7 790 aa7.75□□□□□ -1.17
LRRC39-203ENST00000370138 ZFP42Q96MM3 310 aa7.75□□□□□ -1.17
LRRC39-203ENST00000370138 SH3BP5LQ7L8J4 393 aa7.74□□□□□ -1.17
LRRC39-203ENST00000370138 ARMC2Q8NEN0 867 aa7.74□□□□□ -1.17
LRRC39-203ENST00000370138 LRRN4Q8WUT4 740 aa7.74□□□□□ -1.17
LRRC39-203ENST00000370138 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.74□□□□□ -1.17
LRRC39-203ENST00000370138 C1QTNF2Q9BXJ5 285 aa7.74□□□□□ -1.17
LRRC39-203ENST00000370138 ZFAND3Q9H8U3 227 aa7.74□□□□□ -1.17
LRRC39-203ENST00000370138 MAGEB6P1A0A0J9YX57 407 aa7.72□□□□□ -1.17
LRRC39-203ENST00000370138 NBPF14Q5TI25 921 aa7.72□□□□□ -1.17
LRRC39-203ENST00000370138 MRPL14Q6P1L8 145 aaKnown RBP7.72□□□□□ -1.17
LRRC39-203ENST00000370138 ITPKCQ96DU7 683 aa7.72□□□□□ -1.17
LRRC39-203ENST00000370138 DDRGK1Q96HY6 314 aa7.72□□□□□ -1.17
LRRC39-203ENST00000370138 ZIC2O95409 532 aaPredicted RBP7.71□□□□□ -1.18
LRRC39-203ENST00000370138 NR5A1Q13285 461 aa7.71□□□□□ -1.18
LRRC39-203ENST00000370138 PURBQ96QR8 312 aaKnown RBP7.71□□□□□ -1.18
LRRC39-203ENST00000370138 CARD14Q9BXL6 1004 aa7.71□□□□□ -1.18
LRRC39-203ENST00000370138 PPP2R2DQ66LE6 453 aa7.7□□□□□ -1.18
LRRC39-203ENST00000370138 FSHRP23945 695 aa7.69□□□□□ -1.18
LRRC39-203ENST00000370138 NR6A1Q15406 480 aa7.69□□□□□ -1.18
LRRC39-203ENST00000370138 FAM181BA6NEQ2 426 aa7.68□□□□□ -1.18
LRRC39-203ENST00000370138 SOBPA7XYQ1 873 aa7.68□□□□□ -1.18
LRRC39-203ENST00000370138 VEGFBP49765 207 aa7.68□□□□□ -1.18
LRRC39-203ENST00000370138 ERFEQ4G0M1 354 aa7.68□□□□□ -1.18
LRRC39-203ENST00000370138 VASH1Q7L8A9 365 aaPredicted RBP7.68□□□□□ -1.18
LRRC39-203ENST00000370138 TRMT44Q8IYL2 757 aaKnown RBP7.68□□□□□ -1.18
LRRC39-203ENST00000370138 NXF1Q9UBU9 619 aaKnown RBP7.68□□□□□ -1.18
LRRC39-203ENST00000370138 ATP1B4Q9UN42 357 aaPredicted RBP7.68□□□□□ -1.18
LRRC39-203ENST00000370138 AP1G2O75843 785 aa7.68□□□□□ -1.18
LRRC39-203ENST00000370138 FKBPLQ9UIM3 349 aa7.68□□□□□ -1.18
LRRC39-203ENST00000370138 MAP4K5Q9Y4K4 846 aa7.68□□□□□ -1.18
LRRC39-203ENST00000370138 SCARF1Q14162 830 aa7.67□□□□□ -1.18
LRRC39-203ENST00000370138 EPS8L1Q8TE68 723 aa7.67□□□□□ -1.18
LRRC39-203ENST00000370138 GPKOWQ92917 476 aaPredicted RBP eCLIP7.67□□□□□ -1.18
LRRC39-203ENST00000370138 C6orf118Q5T5N4 469 aa7.66□□□□□ -1.18
LRRC39-203ENST00000370138 PDXDC2PQ6P474 469 aa7.66□□□□□ -1.18
LRRC39-203ENST00000370138 OCSTAMPQ9BR26 566 aa7.66□□□□□ -1.18
LRRC39-203ENST00000370138 HMX1Q9NP08 348 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms