RNA–Protein interactions for RNA: ENST00000336418.8

AP3S2-201, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S2, Length 5,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-201ENST00000336418 ODF2Q5BJF6 829 aa13.73□□□□□ -0.21
AP3S2-201ENST00000336418 GOLGA6L10A6NI86 522 aa13.73□□□□□ -0.21
AP3S2-201ENST00000336418 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
AP3S2-201ENST00000336418 LRRCC1Q9C099 1032 aa13.73□□□□□ -0.21
AP3S2-201ENST00000336418 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
AP3S2-201ENST00000336418 ERLIN1O75477 346 aa13.72□□□□□ -0.21
AP3S2-201ENST00000336418 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
AP3S2-201ENST00000336418 ENOX2Q16206 610 aaKnown RBP13.72□□□□□ -0.21
AP3S2-201ENST00000336418 FYB1O15117 783 aa13.72□□□□□ -0.21
AP3S2-201ENST00000336418 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
AP3S2-201ENST00000336418 USP8P40818 1118 aa13.72□□□□□ -0.21
AP3S2-201ENST00000336418 ERICH2A1L162 156 aa13.71□□□□□ -0.21
AP3S2-201ENST00000336418 ROCK1Q13464 1354 aa13.71□□□□□ -0.21
AP3S2-201ENST00000336418 WASHC4Q2M389 1173 aa13.71□□□□□ -0.21
AP3S2-201ENST00000336418 TMCO3Q6UWJ1 677 aa13.71□□□□□ -0.21
AP3S2-201ENST00000336418 ZNF428Q96B54 188 aa13.71□□□□□ -0.21
AP3S2-201ENST00000336418 NEUROD6Q96NK8 337 aa13.71□□□□□ -0.21
AP3S2-201ENST00000336418 FILIP1LQ4L180 1135 aa13.71□□□□□ -0.21
AP3S2-201ENST00000336418 FHOD3Q2V2M9 1422 aa13.71□□□□□ -0.21
AP3S2-201ENST00000336418 ERC2O15083 957 aa13.71□□□□□ -0.22
AP3S2-201ENST00000336418 CCDC181Q5TID7 509 aa13.71□□□□□ -0.22
AP3S2-201ENST00000336418 DYDC1Q8WWB3 177 aa13.7□□□□□ -0.22
AP3S2-201ENST00000336418 NOB1Q9ULX3 412 aaKnown RBP13.7□□□□□ -0.22
AP3S2-201ENST00000336418 CADPSQ9ULU8 1353 aa13.7□□□□□ -0.22
AP3S2-201ENST00000336418 ANKRD62A6NC57 917 aa13.7□□□□□ -0.22
AP3S2-201ENST00000336418 STK38Q15208 465 aa13.7□□□□□ -0.22
AP3S2-201ENST00000336418 CNTROBQ8N137 903 aa13.7□□□□□ -0.22
AP3S2-201ENST00000336418 PSMA5P28066 241 aa13.7□□□□□ -0.22
AP3S2-201ENST00000336418 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
AP3S2-201ENST00000336418 UBXN4Q92575 508 aa13.7□□□□□ -0.22
AP3S2-201ENST00000336418 FSD1Q9BTV5 496 aa13.7□□□□□ -0.22
AP3S2-201ENST00000336418 NEFHP12036 1026 aa13.7□□□□□ -0.22
AP3S2-201ENST00000336418 ZNF526Q8TF50 670 aaPredicted RBP13.7□□□□□ -0.22
AP3S2-201ENST00000336418 CWC22Q9HCG8 908 aaKnown RBP13.7□□□□□ -0.22
AP3S2-201ENST00000336418 TCEAL9Q9UHQ7 104 aa13.69□□□□□ -0.22
AP3S2-201ENST00000336418 GTF2E1P29083 439 aaPredicted RBP13.69□□□□□ -0.22
AP3S2-201ENST00000336418 RALYLQ86SE5 291 aaKnown RBP13.69□□□□□ -0.22
AP3S2-201ENST00000336418 PPFIBP1Q86W92 1011 aa13.69□□□□□ -0.22
AP3S2-201ENST00000336418 COG3Q96JB2 828 aa13.69□□□□□ -0.22
AP3S2-201ENST00000336418 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.69□□□□□ -0.227e-11■■■■■ 260.8
AP3S2-201ENST00000336418 LRRFIP2Q9Y608 721 aaKnown RBP13.69□□□□□ -0.22
AP3S2-201ENST00000336418 CALCOCO1Q9P1Z2 691 aa13.69□□□□□ -0.22
AP3S2-201ENST00000336418 NINLQ9Y2I6 1382 aa13.69□□□□□ -0.22
AP3S2-201ENST00000336418 WASHC2CQ9Y4E1 1318 aa13.68□□□□□ -0.22
AP3S2-201ENST00000336418 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
AP3S2-201ENST00000336418 ME1P48163 572 aa13.68□□□□□ -0.22
AP3S2-201ENST00000336418 EID1Q9Y6B2 187 aa13.68□□□□□ -0.22
AP3S2-201ENST00000336418 NEXNQ0ZGT2 675 aa13.68□□□□□ -0.22
AP3S2-201ENST00000336418 DNAJC2Q99543 621 aaKnown RBP13.68□□□□□ -0.22
AP3S2-201ENST00000336418 SRRTQ9BXP5 876 aaKnown RBP13.68□□□□□ -0.22
AP3S2-201ENST00000336418 MAGEC2Q9UBF1 373 aaPredicted RBP13.68□□□□□ -0.22
AP3S2-201ENST00000336418 MINK1Q8N4C8 1332 aaPredicted RBP13.68□□□□□ -0.22
AP3S2-201ENST00000336418 TRMT1Q9NXH9 659 aaKnown RBP13.68□□□□□ -0.22
AP3S2-201ENST00000336418 MYO6Q9UM54 1294 aa13.68□□□□□ -0.22
AP3S2-201ENST00000336418 GOLGA6L7A0A1B0GV03 622 aa13.67□□□□□ -0.22
AP3S2-201ENST00000336418 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
AP3S2-201ENST00000336418 TSR2Q969E8 191 aaKnown RBP13.67□□□□□ -0.22
AP3S2-201ENST00000336418 C16orf45Q96MC5 204 aaPredicted RBP13.67□□□□□ -0.22
AP3S2-201ENST00000336418 TSPYL4Q9UJ04 414 aa13.67□□□□□ -0.22
AP3S2-201ENST00000336418 EXOSC9Q06265 439 aaKnown RBP13.67□□□□□ -0.22
AP3S2-201ENST00000336418 NOL10Q9BSC4 688 aaKnown RBP13.67□□□□□ -0.22
AP3S2-201ENST00000336418 AIMP1Q12904 312 aaKnown RBP13.67□□□□□ -0.22
AP3S2-201ENST00000336418 C1orf141Q5JVX7 400 aa13.67□□□□□ -0.22
AP3S2-201ENST00000336418 WDR33Q9C0J8 1336 aaKnown RBP13.67□□□□□ -0.22
AP3S2-201ENST00000336418 ZNF396Q96N95 335 aaPredicted RBP13.67□□□□□ -0.22
AP3S2-201ENST00000336418 PTPN14Q15678 1187 aa13.67□□□□□ -0.22
AP3S2-201ENST00000336418 LRRFIP1Q32MZ4 808 aaKnown RBP13.67□□□□□ -0.22
AP3S2-201ENST00000336418 RSPH4AQ5TD94 716 aa13.67□□□□□ -0.22
AP3S2-201ENST00000336418 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
AP3S2-201ENST00000336418 NUP62CLQ9H1M0 184 aa13.67□□□□□ -0.22
AP3S2-201ENST00000336418 TEFQ10587 303 aa13.66□□□□□ -0.22
AP3S2-201ENST00000336418 ZBTB9Q96C00 473 aa13.66□□□□□ -0.22
AP3S2-201ENST00000336418 SPATA32Q96LK8 384 aa13.66□□□□□ -0.22
AP3S2-201ENST00000336418 IGSF3O75054 1194 aa13.66□□□□□ -0.22
AP3S2-201ENST00000336418 RNF187Q5TA31 235 aaPredicted RBP13.66□□□□□ -0.22
AP3S2-201ENST00000336418 SSFA2P28290 1259 aa13.65□□□□□ -0.22
AP3S2-201ENST00000336418 USP25Q9UHP3 1055 aa13.65□□□□□ -0.22
AP3S2-201ENST00000336418 UBTFL1P0CB47 393 aaPredicted RBP13.65□□□□□ -0.22
AP3S2-201ENST00000336418 MCM2P49736 904 aa13.65□□□□□ -0.22
AP3S2-201ENST00000336418 LARP1BQ659C4 914 aaKnown RBP13.65□□□□□ -0.22
AP3S2-201ENST00000336418 FAM69CQ0P6D2 419 aa13.64□□□□□ -0.23
AP3S2-201ENST00000336418 RAPGEF2Q9Y4G8 1499 aa13.64□□□□□ -0.23
AP3S2-201ENST00000336418 SURF6O75683 361 aaKnown RBP13.64□□□□□ -0.23
AP3S2-201ENST00000336418 ZRSR2Q15696 482 aaKnown RBP13.64□□□□□ -0.23
AP3S2-201ENST00000336418 ZNF830Q96NB3 372 aaPredicted RBP13.64□□□□□ -0.23
AP3S2-201ENST00000336418 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
AP3S2-201ENST00000336418 SHTN1A0MZ66 631 aa13.64□□□□□ -0.23
AP3S2-201ENST00000336418 URI1O94763 535 aaPredicted RBP13.64□□□□□ -0.23
AP3S2-201ENST00000336418 GTF2A1P52655 376 aaPredicted RBP13.64□□□□□ -0.23
AP3S2-201ENST00000336418 RBM33Q96EV2 1170 aaKnown RBP13.64□□□□□ -0.23
AP3S2-201ENST00000336418 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
AP3S2-201ENST00000336418 GNAI1P63096 354 aa13.64□□□□□ -0.23
AP3S2-201ENST00000336418 KRT85P78386 507 aa13.64□□□□□ -0.23
AP3S2-201ENST00000336418 ERLIN2O94905 339 aa13.63□□□□□ -0.23
AP3S2-201ENST00000336418 TCP11L2Q8N4U5 519 aa13.63□□□□□ -0.23
AP3S2-201ENST00000336418 UPF3BQ9BZI7 483 aaKnown RBP13.63□□□□□ -0.23
AP3S2-201ENST00000336418 ZNHIT6Q9NWK9 470 aaKnown RBP13.63□□□□□ -0.23
AP3S2-201ENST00000336418 SMG6Q86US8 1419 aaKnown RBP13.63□□□□□ -0.23
AP3S2-201ENST00000336418 CASQ1P31415 396 aa13.63□□□□□ -0.23
AP3S2-201ENST00000336418 SEPT7Q16181 437 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms