RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CCAR1Q8IX12 1150 aaKnown RBP20.07■□□□□ 0.8
SMCHD1-201ENST00000320876 LRRCC1Q9C099 1032 aa20.07■□□□□ 0.8
SMCHD1-201ENST00000320876 PODXL2Q9NZ53 605 aa20.07■□□□□ 0.8
SMCHD1-201ENST00000320876 HNRNPMP52272 730 aaKnown RBP eCLIP20.06■□□□□ 0.84e-7■■■■□ 22.9
SMCHD1-201ENST00000320876 GBP2P32456 591 aaPredicted RBP20.06■□□□□ 0.8
SMCHD1-201ENST00000320876 BRD4O60885 1362 aaPredicted RBP20.06■□□□□ 0.8
SMCHD1-201ENST00000320876 CBFA2T2O43439 604 aa20.06■□□□□ 0.8
SMCHD1-201ENST00000320876 TNMDQ9H2S6 317 aa20.05■□□□□ 0.8
SMCHD1-201ENST00000320876 UBTFL1P0CB47 393 aaPredicted RBP20.04■□□□□ 0.8
SMCHD1-201ENST00000320876 BRPF1P55201 1214 aaPredicted RBP20.04■□□□□ 0.8
SMCHD1-201ENST00000320876 GRPEL1Q9HAV7 217 aa20.04■□□□□ 0.8
SMCHD1-201ENST00000320876 VGFO15240 615 aaPredicted RBP20.04■□□□□ 0.8
SMCHD1-201ENST00000320876 NECTIN2Q92692 538 aa20.04■□□□□ 0.8
SMCHD1-201ENST00000320876 ANKRD1Q15327 319 aa20.04■□□□□ 0.8
SMCHD1-201ENST00000320876 TRHP20396 242 aaPredicted RBP20.04■□□□□ 0.8
SMCHD1-201ENST00000320876 EVA1CP58658 441 aa20.04■□□□□ 0.8
SMCHD1-201ENST00000320876 AEBP1Q8IUX7 1158 aa20.04■□□□□ 0.8
SMCHD1-201ENST00000320876 CENPHQ9H3R5 247 aa20.04■□□□□ 0.8
SMCHD1-201ENST00000320876 FMNL2Q96PY5 1086 aa20.03■□□□□ 0.8
SMCHD1-201ENST00000320876 WASHC4Q2M389 1173 aa20.03■□□□□ 0.8
SMCHD1-201ENST00000320876 PANK1Q8TE04 598 aa20.03■□□□□ 0.8
SMCHD1-201ENST00000320876 FIBPO43427 364 aa20.03■□□□□ 0.8
SMCHD1-201ENST00000320876 SLC3A2P08195 630 aaKnown RBP20.03■□□□□ 0.8
SMCHD1-201ENST00000320876 PDCL2Q8N4E4 241 aa20.02■□□□□ 0.79
SMCHD1-201ENST00000320876 NEK4P51957 841 aa20.01■□□□□ 0.79
SMCHD1-201ENST00000320876 WDR33Q9C0J8 1336 aaKnown RBP20.01■□□□□ 0.79
SMCHD1-201ENST00000320876 FSD1Q9BTV5 496 aa20.01■□□□□ 0.79
SMCHD1-201ENST00000320876 TSPYL4Q9UJ04 414 aa20.01■□□□□ 0.79
SMCHD1-201ENST00000320876 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
SMCHD1-201ENST00000320876 STK38Q15208 465 aa20■□□□□ 0.79
SMCHD1-201ENST00000320876 NUTM2FA1L443 756 aa20■□□□□ 0.79
SMCHD1-201ENST00000320876 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
SMCHD1-201ENST00000320876 NEUROD6Q96NK8 337 aa19.99■□□□□ 0.79
SMCHD1-201ENST00000320876 CLASRPQ8N2M8 674 aaKnown RBP19.99■□□□□ 0.79
SMCHD1-201ENST00000320876 ANKRD62A6NC57 917 aa19.99■□□□□ 0.79
SMCHD1-201ENST00000320876 CCDC7Q96M83 1385 aa19.99■□□□□ 0.79
SMCHD1-201ENST00000320876 SLC26A8Q96RN1 970 aa19.99■□□□□ 0.79
SMCHD1-201ENST00000320876 TBC1D2BQ9UPU7 963 aa19.99■□□□□ 0.79
SMCHD1-201ENST00000320876 RBM33Q96EV2 1170 aaKnown RBP19.98■□□□□ 0.79
SMCHD1-201ENST00000320876 WWC2Q6AWC2 1192 aa19.98■□□□□ 0.79
SMCHD1-201ENST00000320876 GIMAP7Q8NHV1 300 aa19.98■□□□□ 0.79
SMCHD1-201ENST00000320876 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
SMCHD1-201ENST00000320876 ERC1Q8IUD2 1116 aa19.97■□□□□ 0.79
SMCHD1-201ENST00000320876 ERICH4A6NGS2 130 aa19.97■□□□□ 0.79
SMCHD1-201ENST00000320876 KIF2AO00139 706 aaPredicted RBP19.97■□□□□ 0.79
SMCHD1-201ENST00000320876 KRT18P05783 430 aaKnown RBP19.97■□□□□ 0.79
SMCHD1-201ENST00000320876 PDIA4P13667 645 aaKnown RBP19.96■□□□□ 0.79
SMCHD1-201ENST00000320876 KRT85P78386 507 aa19.96■□□□□ 0.79
SMCHD1-201ENST00000320876 ME1P48163 572 aa19.96■□□□□ 0.79
SMCHD1-201ENST00000320876 TAX1BP1Q86VP1 789 aa19.96■□□□□ 0.79
SMCHD1-201ENST00000320876 RIC3Q7Z5B4 369 aa19.96■□□□□ 0.79
SMCHD1-201ENST00000320876 STK11IPQ8N1F8 1099 aa19.96■□□□□ 0.79
SMCHD1-201ENST00000320876 DDX11Q96FC9 970 aa19.96■□□□□ 0.79
SMCHD1-201ENST00000320876 CCDC102AQ96A19 550 aa19.96■□□□□ 0.79
SMCHD1-201ENST00000320876 FAM193AP78312 1265 aa19.95■□□□□ 0.78
SMCHD1-201ENST00000320876 GCC1Q96CN9 775 aa19.95■□□□□ 0.78
SMCHD1-201ENST00000320876 IL27Q8NEV9 243 aa19.95■□□□□ 0.78
SMCHD1-201ENST00000320876 SCAPERQ9BY12 1400 aa19.95■□□□□ 0.78
SMCHD1-201ENST00000320876 K7ELQ4 463 aaPredicted RBP19.94■□□□□ 0.78
SMCHD1-201ENST00000320876 MCM3P25205 808 aa19.94■□□□□ 0.78
SMCHD1-201ENST00000320876 CFAP45Q9UL16 551 aa19.94■□□□□ 0.78
SMCHD1-201ENST00000320876 MAP9Q49MG5 647 aa19.94■□□□□ 0.78
SMCHD1-201ENST00000320876 GNAI3P08754 354 aa19.94■□□□□ 0.78
SMCHD1-201ENST00000320876 FYB1O15117 783 aa19.94■□□□□ 0.78
SMCHD1-201ENST00000320876 CYP46A1Q9Y6A2 500 aa19.94■□□□□ 0.78
SMCHD1-201ENST00000320876 CEBPZQ03701 1054 aaKnown RBP19.93■□□□□ 0.78
SMCHD1-201ENST00000320876 ESPNB1AK53 854 aa19.93■□□□□ 0.78
SMCHD1-201ENST00000320876 SHTN1A0MZ66 631 aa19.93■□□□□ 0.78
SMCHD1-201ENST00000320876 TMEM132AQ24JP5 1023 aa19.92■□□□□ 0.78
SMCHD1-201ENST00000320876 TRIM22Q8IYM9 498 aa19.92■□□□□ 0.78
SMCHD1-201ENST00000320876 LRRFIP2Q9Y608 721 aaKnown RBP19.92■□□□□ 0.78
SMCHD1-201ENST00000320876 MINK1Q8N4C8 1332 aaPredicted RBP19.92■□□□□ 0.78
SMCHD1-201ENST00000320876 RRBP1Q9P2E9 1410 aaKnown RBP19.92■□□□□ 0.78
SMCHD1-201ENST00000320876 SUPT6HQ7KZ85 1726 aaKnown RBP19.92■□□□□ 0.78
SMCHD1-201ENST00000320876 GBP3Q9H0R5 595 aa19.92■□□□□ 0.78
SMCHD1-201ENST00000320876 FAM177A1Q8N128 213 aaPredicted RBP19.92■□□□□ 0.78
SMCHD1-201ENST00000320876 CEP57L1Q8IYX8 460 aa19.91■□□□□ 0.78
SMCHD1-201ENST00000320876 CCDC148Q8NFR7 591 aa19.91■□□□□ 0.78
SMCHD1-201ENST00000320876 FAM107BQ9H098 131 aa19.91■□□□□ 0.78
SMCHD1-201ENST00000320876 CCDC91Q7Z6B0 441 aa19.91■□□□□ 0.78
SMCHD1-201ENST00000320876 IKQ13123 557 aaPredicted RBP19.91■□□□□ 0.78
SMCHD1-201ENST00000320876 CCDC30Q5VVM6 783 aa19.9■□□□□ 0.78
SMCHD1-201ENST00000320876 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.9■□□□□ 0.787e-7■■■□□ 15.1
SMCHD1-201ENST00000320876 TMCO3Q6UWJ1 677 aa19.9■□□□□ 0.78
SMCHD1-201ENST00000320876 CRACR2AQ9BSW2 395 aa19.9■□□□□ 0.78
SMCHD1-201ENST00000320876 CDKL5O76039 1030 aa19.9■□□□□ 0.78
SMCHD1-201ENST00000320876 CIZ1Q9ULV3 898 aaPredicted RBP19.9■□□□□ 0.78
SMCHD1-201ENST00000320876 PAF1Q8N7H5 531 aa19.89■□□□□ 0.77
SMCHD1-201ENST00000320876 SMTNL1A8MU46 457 aa19.89■□□□□ 0.77
SMCHD1-201ENST00000320876 UBXN4Q92575 508 aa19.89■□□□□ 0.77
SMCHD1-201ENST00000320876 DESP17661 470 aa19.88■□□□□ 0.77
SMCHD1-201ENST00000320876 JAKMIP3Q5VZ66 844 aa19.88■□□□□ 0.77
SMCHD1-201ENST00000320876 SYTL4Q96C24 671 aaPredicted RBP19.88■□□□□ 0.77
SMCHD1-201ENST00000320876 MYOM3Q5VTT5 1437 aa19.88■□□□□ 0.77
SMCHD1-201ENST00000320876 KIAA1328Q86T90 577 aa19.88■□□□□ 0.77
SMCHD1-201ENST00000320876 SMG6Q86US8 1419 aaKnown RBP19.88■□□□□ 0.77
SMCHD1-201ENST00000320876 ZNF397Q8NF99 534 aaPredicted RBP19.88■□□□□ 0.77
SMCHD1-201ENST00000320876 PDE3AQ14432 1141 aa19.88■□□□□ 0.77
SMCHD1-201ENST00000320876 ZSCAN30Q86W11 494 aa19.88■□□□□ 0.77
SMCHD1-201ENST00000320876 EPB41L2O43491 1005 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms