RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 TMEM132EQ6IEE7 984 aa24.45■■□□□ 1.5
MTCL1-201ENST00000306329 NLRP6P59044 892 aa24.44■■□□□ 1.5
MTCL1-201ENST00000306329 RABEP1Q15276 862 aa24.44■■□□□ 1.5
MTCL1-201ENST00000306329 CCDC191Q8NCU4 936 aa24.44■■□□□ 1.5
MTCL1-201ENST00000306329 MAGEC2Q9UBF1 373 aaPredicted RBP24.44■■□□□ 1.5
MTCL1-201ENST00000306329 MCM2P49736 904 aa24.44■■□□□ 1.5
MTCL1-201ENST00000306329 MYO6Q9UM54 1294 aa24.44■■□□□ 1.5
MTCL1-201ENST00000306329 EXOSC9Q06265 439 aaKnown RBP24.44■■□□□ 1.5
MTCL1-201ENST00000306329 CDK5RAP3Q96JB5 506 aa24.44■■□□□ 1.5
MTCL1-201ENST00000306329 STK38Q15208 465 aa24.43■■□□□ 1.5
MTCL1-201ENST00000306329 SPC24Q8NBT2 197 aa24.43■■□□□ 1.5
MTCL1-201ENST00000306329 ZNF396Q96N95 335 aaPredicted RBP24.43■■□□□ 1.5
MTCL1-201ENST00000306329 RUSC2Q8N2Y8 1516 aa24.43■■□□□ 1.5
MTCL1-201ENST00000306329 HIP1O00291 1037 aa24.42■■□□□ 1.5
MTCL1-201ENST00000306329 CCP110O43303 1012 aa24.42■■□□□ 1.5
MTCL1-201ENST00000306329 ATF3P18847 181 aa24.42■■□□□ 1.5
MTCL1-201ENST00000306329 RDXP35241 583 aaKnown RBP24.42■■□□□ 1.5
MTCL1-201ENST00000306329 TXLNAP40222 546 aa24.41■■□□□ 1.5
MTCL1-201ENST00000306329 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
MTCL1-201ENST00000306329 BRPF3Q9ULD4 1205 aa24.41■■□□□ 1.5
MTCL1-201ENST00000306329 PRKAR2BP31323 418 aa24.4■■□□□ 1.5
MTCL1-201ENST00000306329 ZNF644Q9H582 1327 aaPredicted RBP24.4■■□□□ 1.5
MTCL1-201ENST00000306329 TWISTNBQ3B726 338 aaPredicted RBP24.39■■□□□ 1.5
MTCL1-201ENST00000306329 GAS2L2Q8NHY3 880 aa24.39■■□□□ 1.5
MTCL1-201ENST00000306329 AXDND1Q5T1B0 1012 aaPredicted RBP24.39■■□□□ 1.49
MTCL1-201ENST00000306329 STAC3Q96MF2 364 aa24.39■■□□□ 1.49
MTCL1-201ENST00000306329 GCC1Q96CN9 775 aa24.38■■□□□ 1.49
MTCL1-201ENST00000306329 KRT18P05783 430 aaKnown RBP24.38■■□□□ 1.49
MTCL1-201ENST00000306329 GNAI2P04899 355 aa24.37■■□□□ 1.49
MTCL1-201ENST00000306329 CCAR1Q8IX12 1150 aaKnown RBP24.37■■□□□ 1.49
MTCL1-201ENST00000306329 TMEM132AQ24JP5 1023 aa24.37■■□□□ 1.49
MTCL1-201ENST00000306329 TSPYL1Q9H0U9 437 aa24.37■■□□□ 1.49
MTCL1-201ENST00000306329 PPP2R1AP30153 589 aa24.37■■□□□ 1.49
MTCL1-201ENST00000306329 RBM10P98175 930 aaKnown RBP24.37■■□□□ 1.49
MTCL1-201ENST00000306329 ERC1Q8IUD2 1116 aa24.37■■□□□ 1.49
MTCL1-201ENST00000306329 NOB1Q9ULX3 412 aaKnown RBP24.37■■□□□ 1.49
MTCL1-201ENST00000306329 WASHC2AQ641Q2 1341 aa24.36■■□□□ 1.49
MTCL1-201ENST00000306329 STK3Q13188 491 aa24.36■■□□□ 1.49
MTCL1-201ENST00000306329 SERPINC1P01008 464 aa24.36■■□□□ 1.49
MTCL1-201ENST00000306329 SLC3A2P08195 630 aaKnown RBP24.36■■□□□ 1.49
MTCL1-201ENST00000306329 CCDC66A2RUB6 948 aa24.36■■□□□ 1.49
MTCL1-201ENST00000306329 TTC39AQ5SRH9 613 aa24.36■■□□□ 1.49
MTCL1-201ENST00000306329 KIF6Q6ZMV9 814 aa24.35■■□□□ 1.49
MTCL1-201ENST00000306329 PIP4K2AP48426 406 aaPredicted RBP24.35■■□□□ 1.49
MTCL1-201ENST00000306329 HMGN5P82970 282 aaKnown RBP24.35■■□□□ 1.49
MTCL1-201ENST00000306329 SYCP1Q15431 976 aa24.35■■□□□ 1.49
MTCL1-201ENST00000306329 FGD6Q6ZV73 1430 aa24.35■■□□□ 1.49
MTCL1-201ENST00000306329 CYP46A1Q9Y6A2 500 aa24.34■■□□□ 1.49
MTCL1-201ENST00000306329 LEKR1Q6ZMV7 388 aa24.33■■□□□ 1.49
MTCL1-201ENST00000306329 TSR2Q969E8 191 aaKnown RBP24.33■■□□□ 1.49
MTCL1-201ENST00000306329 ZNHIT6Q9NWK9 470 aaKnown RBP24.33■■□□□ 1.49
MTCL1-201ENST00000306329 RBM42Q9BTD8 480 aaKnown RBP24.33■■□□□ 1.48
MTCL1-201ENST00000306329 CCDC192P0DO97 292 aa24.32■■□□□ 1.48
MTCL1-201ENST00000306329 CCDC158Q5M9N0 1113 aa24.32■■□□□ 1.48
MTCL1-201ENST00000306329 JMYQ8N9B5 988 aa24.32■■□□□ 1.48
MTCL1-201ENST00000306329 PLEKHO1Q53GL0 409 aaPredicted RBP24.32■■□□□ 1.48
MTCL1-201ENST00000306329 MPNDQ8N594 471 aa24.32■■□□□ 1.48
MTCL1-201ENST00000306329 CNNM1Q9NRU3 951 aa24.32■■□□□ 1.48
MTCL1-201ENST00000306329 ABTB2Q8N961 1025 aa24.32■■□□□ 1.48
MTCL1-201ENST00000306329 TNMDQ9H2S6 317 aa24.32■■□□□ 1.48
MTCL1-201ENST00000306329 CT47B1P0C2W7 299 aaPredicted RBP24.31■■□□□ 1.48
MTCL1-201ENST00000306329 BCAR3O75815 825 aa24.31■■□□□ 1.48
MTCL1-201ENST00000306329 PDE3AQ14432 1141 aa24.31■■□□□ 1.48
MTCL1-201ENST00000306329 SLC4A2P04920 1241 aa24.3■■□□□ 1.48
MTCL1-201ENST00000306329 STK11IPQ8N1F8 1099 aa24.3■■□□□ 1.48
MTCL1-201ENST00000306329 ME1P48163 572 aa24.3■■□□□ 1.48
MTCL1-201ENST00000306329 AEBP1Q8IUX7 1158 aa24.3■■□□□ 1.48
MTCL1-201ENST00000306329 MAP4K4O95819 1239 aaPredicted RBP24.3■■□□□ 1.48
MTCL1-201ENST00000306329 PPFIBP1Q86W92 1011 aa24.3■■□□□ 1.48
MTCL1-201ENST00000306329 CFAP70Q5T0N1 1121 aa24.29■■□□□ 1.48
MTCL1-201ENST00000306329 ANKRD50Q9ULJ7 1429 aa24.29■■□□□ 1.48
MTCL1-201ENST00000306329 SIL1Q9H173 461 aa24.29■■□□□ 1.48
MTCL1-201ENST00000306329 NEFHP12036 1026 aa24.28■■□□□ 1.48
MTCL1-201ENST00000306329 LRRCC1Q9C099 1032 aa24.28■■□□□ 1.48
MTCL1-201ENST00000306329 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.28■■□□□ 1.483e-6■■■■□ 22.5
MTCL1-201ENST00000306329 ZNF428Q96B54 188 aa24.28■■□□□ 1.48
MTCL1-201ENST00000306329 WDR33Q9C0J8 1336 aaKnown RBP24.28■■□□□ 1.48
MTCL1-201ENST00000306329 K7ELQ4 463 aaPredicted RBP24.28■■□□□ 1.48
MTCL1-201ENST00000306329 HDGFL1Q5TGJ6 251 aa24.28■■□□□ 1.48
MTCL1-201ENST00000306329 PAF1Q8N7H5 531 aa24.28■■□□□ 1.48
MTCL1-201ENST00000306329 ANKRD1Q15327 319 aa24.27■■□□□ 1.48
MTCL1-201ENST00000306329 DEF6Q9H4E7 631 aa24.27■■□□□ 1.48
MTCL1-201ENST00000306329 GPRASP1Q5JY77 1395 aa24.27■■□□□ 1.48
MTCL1-201ENST00000306329 ERLIN2O94905 339 aa24.27■■□□□ 1.48
MTCL1-201ENST00000306329 ATP2B2Q01814 1243 aa24.27■■□□□ 1.48
MTCL1-201ENST00000306329 TRIM22Q8IYM9 498 aa24.26■■□□□ 1.47
MTCL1-201ENST00000306329 ZHX3Q9H4I2 956 aa24.26■■□□□ 1.47
MTCL1-201ENST00000306329 DACH1Q9UI36 760 aa24.26■■□□□ 1.47
MTCL1-201ENST00000306329 KRT85P78386 507 aa24.26■■□□□ 1.47
MTCL1-201ENST00000306329 CCDC112Q8NEF3 446 aa24.26■■□□□ 1.47
MTCL1-201ENST00000306329 CUX1P39880 1505 aa24.25■■□□□ 1.47
MTCL1-201ENST00000306329 CCDC181Q5TID7 509 aa24.25■■□□□ 1.47
MTCL1-201ENST00000306329 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
MTCL1-201ENST00000306329 FAM177A1Q8N128 213 aaPredicted RBP24.25■■□□□ 1.47
MTCL1-201ENST00000306329 PLCD4Q9BRC7 762 aa24.25■■□□□ 1.47
MTCL1-201ENST00000306329 GNL3LQ9NVN8 582 aaKnown RBP24.25■■□□□ 1.47
MTCL1-201ENST00000306329 PDCL3Q9H2J4 239 aa24.25■■□□□ 1.47
MTCL1-201ENST00000306329 GOLGA6L10A6NI86 522 aa24.24■■□□□ 1.47
MTCL1-201ENST00000306329 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
MTCL1-201ENST00000306329 TANGO6Q9C0B7 1094 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms