RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 PRAM1Q96QH2 718 aa26.65■■□□□ 1.86
LRPAP1-201ENST00000296325 RREB1Q92766 1687 aa26.64■■□□□ 1.86
LRPAP1-201ENST00000296325 TRIM37O94972 964 aa26.64■■□□□ 1.86
LRPAP1-201ENST00000296325 DLC1Q96QB1 1528 aa26.64■■□□□ 1.85
LRPAP1-201ENST00000296325 DHX57Q6P158 1386 aaKnown RBP26.63■■□□□ 1.85
LRPAP1-201ENST00000296325 FAM196AQ6ZSG2 479 aa26.63■■□□□ 1.85
LRPAP1-201ENST00000296325 SPATA31A1Q5TZJ5 1347 aa26.63■■□□□ 1.85
LRPAP1-201ENST00000296325 ACIN1Q9UKV3 1341 aaKnown RBP26.62■■□□□ 1.85
LRPAP1-201ENST00000296325 SAFB2Q14151 953 aaKnown RBP eCLIP26.61■■□□□ 1.85
LRPAP1-201ENST00000296325 CFAP70Q5T0N1 1121 aa26.6■■□□□ 1.85
LRPAP1-201ENST00000296325 GPRASP1Q5JY77 1395 aa26.59■■□□□ 1.85
LRPAP1-201ENST00000296325 NUP188Q5SRE5 1749 aa26.59■■□□□ 1.85
LRPAP1-201ENST00000296325 APBA3O96018 575 aa26.58■■□□□ 1.85
LRPAP1-201ENST00000296325 PRDM11Q9NQV5 511 aa26.58■■□□□ 1.85
LRPAP1-201ENST00000296325 PRR36Q9H6K5 1346 aa26.58■■□□□ 1.85
LRPAP1-201ENST00000296325 TULP4Q9NRJ4 1543 aa26.54■■□□□ 1.84
LRPAP1-201ENST00000296325 KIAA0232Q92628 1395 aa26.53■■□□□ 1.84
LRPAP1-201ENST00000296325 NINLQ9Y2I6 1382 aa26.53■■□□□ 1.84
LRPAP1-201ENST00000296325 ADGRB1O14514 1584 aa26.53■■□□□ 1.84
LRPAP1-201ENST00000296325 MPHOSPH9Q99550 1183 aa26.52■■□□□ 1.84
LRPAP1-201ENST00000296325 EIF3AQ14152 1382 aaKnown RBP26.51■■□□□ 1.83
LRPAP1-201ENST00000296325 POGKQ9P215 609 aa26.51■■□□□ 1.83
LRPAP1-201ENST00000296325 BARGINQ6ZT62 677 aa26.5■■□□□ 1.83
LRPAP1-201ENST00000296325 SPON1Q9HCB6 807 aa26.49■■□□□ 1.83
LRPAP1-201ENST00000296325 NBPF8Q3BBV2 869 aa26.48■■□□□ 1.83
LRPAP1-201ENST00000296325 NBPF14Q5TI25 921 aa26.48■■□□□ 1.83
LRPAP1-201ENST00000296325 HIRIP3Q9BW71 556 aaPredicted RBP26.48■■□□□ 1.83
LRPAP1-201ENST00000296325 UTRNP46939 3433 aa26.48■■□□□ 1.83
LRPAP1-201ENST00000296325 PHRF1Q9P1Y6 1649 aaKnown RBP26.47■■□□□ 1.83
LRPAP1-201ENST00000296325 KCNQ2O43526 872 aa26.47■■□□□ 1.83
LRPAP1-201ENST00000296325 CHRNA2Q15822 529 aa26.47■■□□□ 1.83
LRPAP1-201ENST00000296325 STRN4Q9NRL3 753 aa26.46■■□□□ 1.83
LRPAP1-201ENST00000296325 WASLO00401 505 aaPredicted RBP26.45■■□□□ 1.82
LRPAP1-201ENST00000296325 SSH2Q76I76 1423 aa26.45■■□□□ 1.82
LRPAP1-201ENST00000296325 PAK3O75914 559 aaPredicted RBP26.43■■□□□ 1.82
LRPAP1-201ENST00000296325 PDE3BQ13370 1112 aa26.43■■□□□ 1.82
LRPAP1-201ENST00000296325 NGDNQ8NEJ9 315 aaKnown RBP26.43■■□□□ 1.82
LRPAP1-201ENST00000296325 PPP1R1BQ9UD71 204 aaPredicted RBP26.43■■□□□ 1.82
LRPAP1-201ENST00000296325 MINK1Q8N4C8 1332 aaPredicted RBP26.42■■□□□ 1.82
LRPAP1-201ENST00000296325 ATP7BP35670 1465 aa26.42■■□□□ 1.82
LRPAP1-201ENST00000296325 USP35Q9P2H5 1018 aa26.41■■□□□ 1.82
LRPAP1-201ENST00000296325 CAMTA1Q9Y6Y1 1673 aa26.41■■□□□ 1.82
LRPAP1-201ENST00000296325 TRAK1Q9UPV9 953 aa26.4■■□□□ 1.82
LRPAP1-201ENST00000296325 ZC3H6P61129 1189 aaKnown RBP26.39■■□□□ 1.82
LRPAP1-201ENST00000296325 LMO7Q8WWI1 1683 aa26.38■■□□□ 1.81
LRPAP1-201ENST00000296325 DCAF8L1A6NGE4 600 aa26.38■■□□□ 1.81
LRPAP1-201ENST00000296325 TCP11L2Q8N4U5 519 aa26.38■■□□□ 1.81
LRPAP1-201ENST00000296325 LARP1Q6PKG0 1096 aaKnown RBP26.37■■□□□ 1.81
LRPAP1-201ENST00000296325 RGPD3A6NKT7 1758 aaPredicted RBP26.37■■□□□ 1.81
LRPAP1-201ENST00000296325 RGPD4Q7Z3J3 1758 aa26.37■■□□□ 1.81
LRPAP1-201ENST00000296325 NRKQ7Z2Y5 1582 aa26.36■■□□□ 1.81
LRPAP1-201ENST00000296325 CASZ1Q86V15 1759 aa26.35■■□□□ 1.81
LRPAP1-201ENST00000296325 CPDO75976 1380 aa26.35■■□□□ 1.81
LRPAP1-201ENST00000296325 ITSN1Q15811 1721 aa26.35■■□□□ 1.81
LRPAP1-201ENST00000296325 PARP4Q9UKK3 1724 aaKnown RBP26.35■■□□□ 1.81
LRPAP1-201ENST00000296325 PEAK1Q9H792 1746 aa26.34■■□□□ 1.81
LRPAP1-201ENST00000296325 THRAP3Q9Y2W1 955 aaKnown RBP26.34■■□□□ 1.81
LRPAP1-201ENST00000296325 EVA1CP58658 441 aa26.33■■□□□ 1.81
LRPAP1-201ENST00000296325 ZNF784Q8NCA9 323 aaPredicted RBP26.33■■□□□ 1.81
LRPAP1-201ENST00000296325 ANO8Q9HCE9 1232 aaPredicted RBP26.33■■□□□ 1.81
LRPAP1-201ENST00000296325 POLR3AO14802 1390 aaPredicted RBP26.33■■□□□ 1.8
LRPAP1-201ENST00000296325 C11orf95C9JLR9 678 aaPredicted RBP26.32■■□□□ 1.8
LRPAP1-201ENST00000296325 PLSCR1O15162 318 aa26.31■■□□□ 1.8
LRPAP1-201ENST00000296325 NUDT16Q96DE0 195 aaKnown RBP26.31■■□□□ 1.8
LRPAP1-201ENST00000296325 NUTM2GQ5VZR2 741 aa26.3■■□□□ 1.8
LRPAP1-201ENST00000296325 USP19O94966 1318 aa26.3■■□□□ 1.8
LRPAP1-201ENST00000296325 OVOS2A0A0G2JMS6 1433 aa26.29■■□□□ 1.8
LRPAP1-201ENST00000296325 OVOS2A0A0J9YW53 1432 aa26.29■■□□□ 1.8
LRPAP1-201ENST00000296325 OVOS2Q6IE36 1432 aa26.29■■□□□ 1.8
LRPAP1-201ENST00000296325 COL5A2P05997 1499 aaPredicted RBP26.27■■□□□ 1.8
LRPAP1-201ENST00000296325 TOPAZ1Q8N9V7 1692 aa26.27■■□□□ 1.8
LRPAP1-201ENST00000296325 PTGER2P43116 358 aa26.26■■□□□ 1.79
LRPAP1-201ENST00000296325 PDGFDQ9GZP0 370 aaPredicted RBP26.26■■□□□ 1.79
LRPAP1-201ENST00000296325 SBF2Q86WG5 1849 aa26.25■■□□□ 1.79
LRPAP1-201ENST00000296325 ARHGEF28Q8N1W1 1705 aaKnown RBP26.25■■□□□ 1.79
LRPAP1-201ENST00000296325 MYOM1P52179 1685 aa26.24■■□□□ 1.79
LRPAP1-201ENST00000296325 ACEP12821 1306 aa26.23■■□□□ 1.79
LRPAP1-201ENST00000296325 LRRC37A3O60309 1634 aa26.22■■□□□ 1.79
LRPAP1-201ENST00000296325 PROM2Q8N271 834 aa26.22■■□□□ 1.79
LRPAP1-201ENST00000296325 CRB1P82279 1406 aa26.22■■□□□ 1.79
LRPAP1-201ENST00000296325 PLEKHG3A1L390 1219 aa26.21■■□□□ 1.79
LRPAP1-201ENST00000296325 PTF1AQ7RTS3 328 aa26.21■■□□□ 1.79
LRPAP1-201ENST00000296325 ZBTB7AO95365 584 aa26.19■■□□□ 1.78
LRPAP1-201ENST00000296325 ABTB2Q8N961 1025 aa26.19■■□□□ 1.78
LRPAP1-201ENST00000296325 BCL11BQ9C0K0 894 aaPredicted RBP26.19■■□□□ 1.78
LRPAP1-201ENST00000296325 CCDC61Q9Y6R9 512 aa26.19■■□□□ 1.78
LRPAP1-201ENST00000296325 BCL9O00512 1426 aa26.19■■□□□ 1.78
LRPAP1-201ENST00000296325 GCP02774 474 aa26.18■■□□□ 1.78
LRPAP1-201ENST00000296325 CDK19Q9BWU1 502 aa26.18■■□□□ 1.78
LRPAP1-201ENST00000296325 CEP350Q5VT06 3117 aa26.17■■□□□ 1.78
LRPAP1-201ENST00000296325 SYT17Q9BSW7 474 aa26.16■■□□□ 1.78
LRPAP1-201ENST00000296325 SENP3-EIF4A1A0A087X0R7 540 aa26.15■■□□□ 1.78
LRPAP1-201ENST00000296325 C1QTNF8P60827 252 aa26.15■■□□□ 1.78
LRPAP1-201ENST00000296325 STAC3Q96MF2 364 aa26.15■■□□□ 1.78
LRPAP1-201ENST00000296325 SGIP1Q9BQI5 828 aa26.14■■□□□ 1.78
LRPAP1-201ENST00000296325 FHDC1Q9C0D6 1143 aaPredicted RBP26.14■■□□□ 1.78
LRPAP1-201ENST00000296325 CHD4Q14839 1912 aa26.14■■□□□ 1.77
LRPAP1-201ENST00000296325 AATKQ6ZMQ8 1374 aa26.13■■□□□ 1.77
LRPAP1-201ENST00000296325 DDB1Q16531 1140 aa26.13■■□□□ 1.77
LRPAP1-201ENST00000296325 NLRP13Q86W25 1043 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms