RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 GNAI3P08754 354 aa23.89■■□□□ 1.41
SOX4-201ENST00000244745 TMX4Q9H1E5 349 aaPredicted RBP23.88■■□□□ 1.41
SOX4-201ENST00000244745 NEUROD6Q96NK8 337 aa23.87■■□□□ 1.41
SOX4-201ENST00000244745 PSMA5P28066 241 aa23.87■■□□□ 1.41
SOX4-201ENST00000244745 NCBP3Q53F19 620 aaKnown RBP23.87■■□□□ 1.41
SOX4-201ENST00000244745 FSD1Q9BTV5 496 aa23.87■■□□□ 1.41
SOX4-201ENST00000244745 UQCRHLA0A096LP55 91 aa23.87■■□□□ 1.41
SOX4-201ENST00000244745 UQCRHP07919 91 aa23.87■■□□□ 1.41
SOX4-201ENST00000244745 HOOK1Q9UJC3 728 aaKnown RBP23.87■■□□□ 1.41
SOX4-201ENST00000244745 PCMTD1Q96MG8 357 aaPredicted RBP23.87■■□□□ 1.41
SOX4-201ENST00000244745 MNS1Q8NEH6 495 aa23.86■■□□□ 1.41
SOX4-201ENST00000244745 WWC1Q8IX03 1113 aa23.86■■□□□ 1.41
SOX4-201ENST00000244745 MCM2P49736 904 aa23.86■■□□□ 1.41
SOX4-201ENST00000244745 GNAI2P04899 355 aa23.85■■□□□ 1.41
SOX4-201ENST00000244745 CT47B1P0C2W7 299 aaPredicted RBP23.85■■□□□ 1.41
SOX4-201ENST00000244745 EVA1CP58658 441 aa23.85■■□□□ 1.41
SOX4-201ENST00000244745 CCDC70Q6NSX1 233 aa23.85■■□□□ 1.41
SOX4-201ENST00000244745 G3V3G9 751 aa23.85■■□□□ 1.41
SOX4-201ENST00000244745 DCAF8Q5TAQ9 597 aa23.85■■□□□ 1.41
SOX4-201ENST00000244745 ANKRD30BQ9BXX2 1392 aa23.84■■□□□ 1.41
SOX4-201ENST00000244745 SLC4A2P04920 1241 aa23.84■■□□□ 1.41
SOX4-201ENST00000244745 MCM4P33991 863 aa23.84■■□□□ 1.41
SOX4-201ENST00000244745 FIBPO43427 364 aa23.84■■□□□ 1.41
SOX4-201ENST00000244745 CWC22Q9HCG8 908 aaKnown RBP23.84■■□□□ 1.41
SOX4-201ENST00000244745 CDK19Q9BWU1 502 aa23.83■■□□□ 1.41
SOX4-201ENST00000244745 HMGXB3Q12766 1538 aa23.83■■□□□ 1.41
SOX4-201ENST00000244745 ESPNB1AK53 854 aa23.83■■□□□ 1.41
SOX4-201ENST00000244745 CYB5RLQ6IPT4 315 aa23.83■■□□□ 1.41
SOX4-201ENST00000244745 MAP4K4O95819 1239 aaPredicted RBP23.82■■□□□ 1.4
SOX4-201ENST00000244745 NOM1Q5C9Z4 860 aaKnown RBP23.82■■□□□ 1.4
SOX4-201ENST00000244745 CLASRPQ8N2M8 674 aaKnown RBP23.82■■□□□ 1.4
SOX4-201ENST00000244745 TRIM5Q9C035 493 aa23.82■■□□□ 1.4
SOX4-201ENST00000244745 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
SOX4-201ENST00000244745 HMGN5P82970 282 aaKnown RBP23.82■■□□□ 1.4
SOX4-201ENST00000244745 WASHC4Q2M389 1173 aa23.82■■□□□ 1.4
SOX4-201ENST00000244745 PLEKHH2Q8IVE3 1493 aa23.82■■□□□ 1.4
SOX4-201ENST00000244745 CCDC66A2RUB6 948 aa23.81■■□□□ 1.4
SOX4-201ENST00000244745 KDM4AO75164 1064 aa23.81■■□□□ 1.4
SOX4-201ENST00000244745 GAS2L2Q8NHY3 880 aa23.81■■□□□ 1.4
SOX4-201ENST00000244745 CABP1Q9NZU7 370 aa23.81■■□□□ 1.4
SOX4-201ENST00000244745 NCOA1Q15788 1441 aa23.81■■□□□ 1.4
SOX4-201ENST00000244745 NSD3Q9BZ95 1437 aa23.81■■□□□ 1.4
SOX4-201ENST00000244745 ANKRD20A12PQ8NF67 263 aa23.81■■□□□ 1.4
SOX4-201ENST00000244745 NAT10Q9H0A0 1025 aaKnown RBP23.81■■□□□ 1.4
SOX4-201ENST00000244745 NLRP6P59044 892 aa23.8■■□□□ 1.4
SOX4-201ENST00000244745 SPC24Q8NBT2 197 aa23.8■■□□□ 1.4
SOX4-201ENST00000244745 CAMSAP2Q08AD1 1489 aa23.79■■□□□ 1.4
SOX4-201ENST00000244745 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
SOX4-201ENST00000244745 DNAJC2Q99543 621 aaKnown RBP23.79■■□□□ 1.4
SOX4-201ENST00000244745 ERICH2A1L162 156 aa23.79■■□□□ 1.4
SOX4-201ENST00000244745 RALYLQ86SE5 291 aaKnown RBP23.79■■□□□ 1.4
SOX4-201ENST00000244745 TMEM57Q8N5G2 664 aa23.79■■□□□ 1.4
SOX4-201ENST00000244745 LRRCC1Q9C099 1032 aa23.79■■□□□ 1.4
SOX4-201ENST00000244745 SULT6B1Q6IMI4 303 aa23.78■■□□□ 1.4
SOX4-201ENST00000244745 MPNDQ8N594 471 aa23.78■■□□□ 1.4
SOX4-201ENST00000244745 MRC2Q9UBG0 1479 aa23.77■■□□□ 1.4
SOX4-201ENST00000244745 SDF4Q9BRK5 362 aa23.77■■□□□ 1.4
SOX4-201ENST00000244745 PODXL2Q9NZ53 605 aa23.77■■□□□ 1.4
SOX4-201ENST00000244745 CEP89Q96ST8 783 aa23.77■■□□□ 1.4
SOX4-201ENST00000244745 MAP3K1Q13233 1512 aa23.77■■□□□ 1.4
SOX4-201ENST00000244745 IPO7O95373 1038 aaKnown RBP23.76■■□□□ 1.39
SOX4-201ENST00000244745 PDILTQ8N807 584 aa23.76■■□□□ 1.39
SOX4-201ENST00000244745 OLFM4Q6UX06 510 aa23.76■■□□□ 1.39
SOX4-201ENST00000244745 ABCC5O15440 1437 aa23.76■■□□□ 1.39
SOX4-201ENST00000244745 RAPGEF4Q8WZA2 1011 aa23.76■■□□□ 1.39
SOX4-201ENST00000244745 CCT4P50991 539 aaKnown RBP23.76■■□□□ 1.39
SOX4-201ENST00000244745 NKTRP30414 1462 aaKnown RBP23.76■■□□□ 1.39
SOX4-201ENST00000244745 SAFBQ15424 915 aaKnown RBP eCLIP23.75■■□□□ 1.39
SOX4-201ENST00000244745 CEBPZQ03701 1054 aaKnown RBP23.75■■□□□ 1.39
SOX4-201ENST00000244745 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
SOX4-201ENST00000244745 PATL2C9JE40 543 aaKnown RBP23.74■■□□□ 1.39
SOX4-201ENST00000244745 TXNDC2Q86VQ3 553 aa23.74■■□□□ 1.39
SOX4-201ENST00000244745 CCDC47Q96A33 483 aaKnown RBP23.74■■□□□ 1.39
SOX4-201ENST00000244745 FAM69CQ0P6D2 419 aa23.74■■□□□ 1.39
SOX4-201ENST00000244745 SMC2O95347 1197 aa23.73■■□□□ 1.39
SOX4-201ENST00000244745 OSCARQ8IYS5 282 aa23.73■■□□□ 1.39
SOX4-201ENST00000244745 AMOTL1Q8IY63 956 aa23.73■■□□□ 1.39
SOX4-201ENST00000244745 VPS37DQ86XT2 251 aa23.72■■□□□ 1.39
SOX4-201ENST00000244745 CWC15Q9P013 229 aaKnown RBP23.72■■□□□ 1.39
SOX4-201ENST00000244745 CIZ1Q9ULV3 898 aaPredicted RBP23.72■■□□□ 1.39
SOX4-201ENST00000244745 HIP1O00291 1037 aa23.72■■□□□ 1.39
SOX4-201ENST00000244745 STK3Q13188 491 aa23.72■■□□□ 1.39
SOX4-201ENST00000244745 SYTL4Q96C24 671 aaPredicted RBP23.72■■□□□ 1.39
SOX4-201ENST00000244745 TMPOP42166 694 aaKnown RBP23.72■■□□□ 1.39
SOX4-201ENST00000244745 WDR33Q9C0J8 1336 aaKnown RBP23.72■■□□□ 1.39
SOX4-201ENST00000244745 ACBD3Q9H3P7 528 aa23.71■■□□□ 1.39
SOX4-201ENST00000244745 IQGAP2Q13576 1575 aa23.71■■□□□ 1.39
SOX4-201ENST00000244745 ARHGEF11O15085 1522 aa23.71■■□□□ 1.39
SOX4-201ENST00000244745 KINO60870 393 aaKnown RBP23.71■■□□□ 1.39
SOX4-201ENST00000244745 NOL10Q9BSC4 688 aaKnown RBP23.71■■□□□ 1.39
SOX4-201ENST00000244745 RAD21O60216 631 aa23.71■■□□□ 1.39
SOX4-201ENST00000244745 ABTB2Q8N961 1025 aa23.71■■□□□ 1.39
SOX4-201ENST00000244745 CYP46A1Q9Y6A2 500 aa23.71■■□□□ 1.39
SOX4-201ENST00000244745 CUL7Q14999 1698 aa23.71■■□□□ 1.39
SOX4-201ENST00000244745 RARSP54136 660 aaKnown RBP23.71■■□□□ 1.39
SOX4-201ENST00000244745 ZNF428Q96B54 188 aa23.7■■□□□ 1.39
SOX4-201ENST00000244745 NLRP2Q9NX02 1062 aa23.7■■□□□ 1.39
SOX4-201ENST00000244745 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.38
SOX4-201ENST00000244745 PDCP20941 246 aa23.7■■□□□ 1.38
SOX4-201ENST00000244745 ERC1Q8IUD2 1116 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms