RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 TSPYL1Q9H0U9 437 aa17.71■□□□□ 0.43
UBR5-201ENST00000220959 FMNL2Q96PY5 1086 aa17.71■□□□□ 0.43
UBR5-201ENST00000220959 PRKRIP1Q9H875 184 aaPredicted RBP17.71■□□□□ 0.43
UBR5-201ENST00000220959 CECR2Q9BXF3 1484 aa17.71■□□□□ 0.43
UBR5-201ENST00000220959 PDCP20941 246 aa17.7■□□□□ 0.42
UBR5-201ENST00000220959 AXDND1Q5T1B0 1012 aaPredicted RBP17.7■□□□□ 0.42
UBR5-201ENST00000220959 NLRP6P59044 892 aa17.7■□□□□ 0.42
UBR5-201ENST00000220959 PLCD4Q9BRC7 762 aa17.7■□□□□ 0.42
UBR5-201ENST00000220959 GOLGA6L10A6NI86 522 aa17.7■□□□□ 0.42
UBR5-201ENST00000220959 STIM1Q13586 685 aa17.7■□□□□ 0.42
UBR5-201ENST00000220959 KIF7Q2M1P5 1343 aa17.7■□□□□ 0.42
UBR5-201ENST00000220959 NASPP49321 788 aaPredicted RBP17.69■□□□□ 0.42
UBR5-201ENST00000220959 DEF6Q9H4E7 631 aa17.69■□□□□ 0.42
UBR5-201ENST00000220959 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.69■□□□□ 0.421e-7■■■□□ 17.6
UBR5-201ENST00000220959 GNAI3P08754 354 aa17.69■□□□□ 0.42
UBR5-201ENST00000220959 CT47B1P0C2W7 299 aaPredicted RBP17.69■□□□□ 0.42
UBR5-201ENST00000220959 MPHOSPH10O00566 681 aaKnown RBP17.68■□□□□ 0.42
UBR5-201ENST00000220959 ERC1Q8IUD2 1116 aa17.68■□□□□ 0.42
UBR5-201ENST00000220959 ABTB2Q8N961 1025 aa17.68■□□□□ 0.42
UBR5-201ENST00000220959 PLEKHO1Q53GL0 409 aaPredicted RBP17.68■□□□□ 0.42
UBR5-201ENST00000220959 RNF214Q8ND24 703 aa17.68■□□□□ 0.42
UBR5-201ENST00000220959 CCDC97Q96F63 343 aaPredicted RBP17.68■□□□□ 0.42
UBR5-201ENST00000220959 DESP17661 470 aa17.67■□□□□ 0.42
UBR5-201ENST00000220959 RBM5P52756 815 aaKnown RBP eCLIP17.67■□□□□ 0.42
UBR5-201ENST00000220959 ENOX2Q16206 610 aaKnown RBP17.67■□□□□ 0.42
UBR5-201ENST00000220959 TANGO6Q9C0B7 1094 aa17.67■□□□□ 0.42
UBR5-201ENST00000220959 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
UBR5-201ENST00000220959 GAS2L2Q8NHY3 880 aa17.67■□□□□ 0.42
UBR5-201ENST00000220959 GPRASP1Q5JY77 1395 aa17.67■□□□□ 0.42
UBR5-201ENST00000220959 RAPGEF2Q9Y4G8 1499 aa17.67■□□□□ 0.42
UBR5-201ENST00000220959 MCM2P49736 904 aa17.67■□□□□ 0.42
UBR5-201ENST00000220959 CCDC181Q5TID7 509 aa17.67■□□□□ 0.42
UBR5-201ENST00000220959 LEKR1Q6ZMV7 388 aa17.67■□□□□ 0.42
UBR5-201ENST00000220959 STK38Q15208 465 aa17.67■□□□□ 0.42
UBR5-201ENST00000220959 JMYQ8N9B5 988 aa17.66■□□□□ 0.42
UBR5-201ENST00000220959 AAMPQ13685 434 aa17.66■□□□□ 0.42
UBR5-201ENST00000220959 SOGA3Q5TF21 947 aa17.66■□□□□ 0.42
UBR5-201ENST00000220959 STK11IPQ8N1F8 1099 aa17.66■□□□□ 0.42
UBR5-201ENST00000220959 TXLNBQ8N3L3 684 aa17.66■□□□□ 0.42
UBR5-201ENST00000220959 NEBLO76041 1014 aa17.66■□□□□ 0.42
UBR5-201ENST00000220959 STRN4Q9NRL3 753 aa17.66■□□□□ 0.42
UBR5-201ENST00000220959 DACH1Q9UI36 760 aa17.66■□□□□ 0.42
UBR5-201ENST00000220959 CEBPZQ03701 1054 aaKnown RBP17.66■□□□□ 0.42
UBR5-201ENST00000220959 SERPINC1P01008 464 aa17.65■□□□□ 0.42
UBR5-201ENST00000220959 MATR3P43243 847 aaKnown RBP eCLIP17.65■□□□□ 0.426e-7■■□□□ 14.3
UBR5-201ENST00000220959 GGNBP2Q9H3C7 697 aa17.65■□□□□ 0.42
UBR5-201ENST00000220959 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
UBR5-201ENST00000220959 TRIM22Q8IYM9 498 aa17.65■□□□□ 0.42
UBR5-201ENST00000220959 PPFIBP1Q86W92 1011 aa17.65■□□□□ 0.42
UBR5-201ENST00000220959 NACAP1Q9BZK3 213 aa17.65■□□□□ 0.42
UBR5-201ENST00000220959 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.42
UBR5-201ENST00000220959 EZRP15311 586 aaKnown RBP17.63■□□□□ 0.41
UBR5-201ENST00000220959 TSPY26PQ9H489 355 aa17.63■□□□□ 0.41
UBR5-201ENST00000220959 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
UBR5-201ENST00000220959 MBD3O95983 291 aa17.63■□□□□ 0.41
UBR5-201ENST00000220959 MTERF4Q7Z6M4 381 aaKnown RBP17.63■□□□□ 0.41
UBR5-201ENST00000220959 GBP2P32456 591 aaPredicted RBP17.63■□□□□ 0.41
UBR5-201ENST00000220959 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
UBR5-201ENST00000220959 NEK4P51957 841 aa17.62■□□□□ 0.41
UBR5-201ENST00000220959 ESCO1Q5FWF5 840 aa17.62■□□□□ 0.41
UBR5-201ENST00000220959 CAVIN1Q6NZI2 390 aaKnown RBP17.62■□□□□ 0.41
UBR5-201ENST00000220959 ZSCAN29Q8IWY8 852 aaPredicted RBP17.62■□□□□ 0.41
UBR5-201ENST00000220959 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
UBR5-201ENST00000220959 PTPRGP23470 1445 aa17.62■□□□□ 0.41
UBR5-201ENST00000220959 MRE11P49959 708 aa17.62■□□□□ 0.41
UBR5-201ENST00000220959 PANK1Q8TE04 598 aa17.62■□□□□ 0.41
UBR5-201ENST00000220959 TRIM21P19474 475 aaKnown RBP17.62■□□□□ 0.41
UBR5-201ENST00000220959 GOLGA6L7A0A1B0GV03 622 aa17.61■□□□□ 0.41
UBR5-201ENST00000220959 CABP2Q9NPB3 220 aa17.61■□□□□ 0.41
UBR5-201ENST00000220959 GNAI2P04899 355 aa17.61■□□□□ 0.41
UBR5-201ENST00000220959 BMP2KQ9NSY1 1161 aaPredicted RBP17.61■□□□□ 0.41
UBR5-201ENST00000220959 CCDC66A2RUB6 948 aa17.6■□□□□ 0.41
UBR5-201ENST00000220959 RABEP1Q15276 862 aa17.6■□□□□ 0.41
UBR5-201ENST00000220959 ANKRD1Q15327 319 aa17.6■□□□□ 0.41
UBR5-201ENST00000220959 PRDM2Q13029 1718 aa17.6■□□□□ 0.41
UBR5-201ENST00000220959 SEPT11Q9NVA2 429 aaKnown RBP17.6■□□□□ 0.41
UBR5-201ENST00000220959 CABP4P57796 275 aa17.6■□□□□ 0.41
UBR5-201ENST00000220959 DHX8Q14562 1220 aaKnown RBP17.6■□□□□ 0.41
UBR5-201ENST00000220959 ZSCAN25Q6NSZ9 544 aa17.6■□□□□ 0.41
UBR5-201ENST00000220959 TAX1BP1Q86VP1 789 aa17.6■□□□□ 0.41
UBR5-201ENST00000220959 NOL7Q9UMY1 257 aaKnown RBP17.6■□□□□ 0.41
UBR5-201ENST00000220959 MPHOSPH8Q99549 860 aa17.6■□□□□ 0.41
UBR5-201ENST00000220959 SPC24Q8NBT2 197 aa17.59■□□□□ 0.41
UBR5-201ENST00000220959 NUP133Q8WUM0 1156 aa17.59■□□□□ 0.41
UBR5-201ENST00000220959 KIAA0754O94854 1291 aa17.59■□□□□ 0.41
UBR5-201ENST00000220959 ZNF76P36508 570 aa17.59■□□□□ 0.41
UBR5-201ENST00000220959 OSCARQ8IYS5 282 aa17.58■□□□□ 0.41
UBR5-201ENST00000220959 FIBPO43427 364 aa17.58■□□□□ 0.4
UBR5-201ENST00000220959 IBSPP21815 317 aaPredicted RBP17.58■□□□□ 0.4
UBR5-201ENST00000220959 PRPF40AO75400 957 aaKnown RBP17.58■□□□□ 0.4
UBR5-201ENST00000220959 HSP90AB3PQ58FF7 597 aa17.58■□□□□ 0.4
UBR5-201ENST00000220959 CCDC57Q2TAC2 916 aa17.58■□□□□ 0.4
UBR5-201ENST00000220959 TRAK2O60296 914 aa17.57■□□□□ 0.4
UBR5-201ENST00000220959 CENPHQ9H3R5 247 aa17.57■□□□□ 0.4
UBR5-201ENST00000220959 STK3Q13188 491 aa17.57■□□□□ 0.4
UBR5-201ENST00000220959 CYP46A1Q9Y6A2 500 aa17.57■□□□□ 0.4
UBR5-201ENST00000220959 SSBP05455 408 aaKnown RBP eCLIP17.57■□□□□ 0.4
UBR5-201ENST00000220959 AEBP1Q8IUX7 1158 aa17.57■□□□□ 0.4
UBR5-201ENST00000220959 NUTM2BA6NNL0 878 aaPredicted RBP17.56■□□□□ 0.4
UBR5-201ENST00000220959 NUTM2EB1AL46 878 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms