RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ZNF408Q9H9D4 720 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 SNX15Q9NRS6 342 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 DNAJC28Q9NX36 388 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 CIDEBQ9UHD4 219 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 NDUFAF1Q9Y375 327 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 MYPNQ86TC9 1320 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 TRAFD1O14545 582 aaPredicted RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 PYGLP06737 847 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 CCDC166P0CW27 439 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 CRABP2P29373 138 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 TGFB2P61812 414 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 ZNF235Q14590 738 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 C6orf52Q5T4I8 152 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 CHST13Q8NET6 341 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 DCPSQ96C86 337 aaKnown RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 QTRT2Q9H974 415 aaKnown RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 MYO1GB0I1T2 1018 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 TMEM63AO94886 807 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 VAPBO95292 243 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 OAS1P00973 400 aaKnown RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 BFSP2Q13515 415 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 FRG1Q14331 258 aaKnown RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 INSCQ1MX18 579 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 SCARA3Q6AZY7 606 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 DPY19L2Q6NUT2 758 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 PTAR1Q7Z6K3 402 aaPredicted RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 KCTD14Q9BQ13 255 aaPredicted RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 ZNF670Q9BS34 389 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 TMEM134Q9H6X4 195 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 GNAZP19086 355 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 PSMB4P28070 264 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 HOXA10P31260 410 aaPredicted RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 BST2Q10589 180 aaKnown RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 VPS72Q15906 364 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 CDCA2Q69YH5 1023 aaPredicted RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 CMC1Q7Z7K0 106 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 CCDC103Q8IW40 242 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 LRRN4Q8WUT4 740 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 DNAJC1Q96KC8 554 aaKnown RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 PLEKHG4BQ96PX9 1271 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 THUMPD3Q9BV44 507 aaKnown RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 WDR55Q9H6Y2 383 aaPredicted RBP14.93□□□□□ -0.02
VPS36-207ENST00000611132 SPAG4Q9NPE6 437 aa14.93□□□□□ -0.02
VPS36-207ENST00000611132 NDUFS3O75489 264 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 BAIAP3O94812 1187 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 C4BPAP04003 597 aaKnown RBP14.92□□□□□ -0.02
VPS36-207ENST00000611132 GDF10P55107 478 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 ZC3H12AQ5D1E8 599 aaKnown RBP14.92□□□□□ -0.02
VPS36-207ENST00000611132 P3H2Q8IVL5 708 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 DAW1Q8N136 415 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 GLIS1Q8NBF1 620 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 OR52K1Q8NGK4 314 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 OR9Q1Q8NGQ5 310 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 SLC35B2Q8TB61 432 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 FNIP1Q8TF40 1166 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 DCAKDQ8WVC6 231 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 RMDN1Q96DB5 314 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 EBF4Q9BQW3 602 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 ERAP1Q9NZ08 941 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 TSR3Q9UJK0 312 aaKnown RBP14.92□□□□□ -0.02
VPS36-207ENST00000611132 CCNG1P51959 295 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 LAMC2Q13753 1193 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 POU6F1Q14863 301 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 SHROOM1Q2M3G4 852 aaPredicted RBP14.92□□□□□ -0.02
VPS36-207ENST00000611132 VWA5B1Q5TIE3 1220 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 DSELQ8IZU8 1212 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 THEM5Q8N1Q8 247 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 FAM47BQ8NA70 645 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 BORCS5Q969J3 196 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 NSMCE2Q96MF7 247 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 FAM193BQ96PV7 902 aaPredicted RBP14.92□□□□□ -0.02
VPS36-207ENST00000611132 WDCPQ9H6R7 721 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 CATSPERBQ9H7T0 1116 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 HMG20AQ9NP66 347 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 MORF4L1Q9UBU8 362 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 ZNRF3Q9ULT6 936 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 H3BNX3 289 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 TYROBPO43914 113 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 CLASP2O75122 1294 aaKnown RBP14.92□□□□□ -0.02
VPS36-207ENST00000611132 ATP6V1B2P21281 511 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 HK2P52789 917 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 TSPY1Q01534 308 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 TTC30AQ86WT1 665 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 LENG8Q96PV6 779 aaPredicted RBP14.92□□□□□ -0.02
VPS36-207ENST00000611132 STK39Q9UEW8 545 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 PIN4Q9Y237 131 aaKnown RBP14.92□□□□□ -0.02
VPS36-207ENST00000611132 SQORQ9Y6N5 450 aa14.92□□□□□ -0.02
VPS36-207ENST00000611132 BAZ2AQ9UIF9 1905 aaKnown RBP14.92□□□□□ -0.02
VPS36-207ENST00000611132 IQCA1LA6NCM1 817 aa14.91□□□□□ -0.02
VPS36-207ENST00000611132 ACKR2O00590 384 aa14.91□□□□□ -0.02
VPS36-207ENST00000611132 SNRPB2P08579 225 aaKnown RBP14.91□□□□□ -0.02
VPS36-207ENST00000611132 TSTA3Q13630 321 aaPredicted RBP14.91□□□□□ -0.02
VPS36-207ENST00000611132 TATDN1Q6P1N9 297 aa14.91□□□□□ -0.02
VPS36-207ENST00000611132 NAT8LQ8N9F0 302 aa14.91□□□□□ -0.02
VPS36-207ENST00000611132 BORCS6Q96GS4 357 aa14.91□□□□□ -0.02
VPS36-207ENST00000611132 PANX3Q96QZ0 392 aa14.91□□□□□ -0.02
VPS36-207ENST00000611132 TMEM165Q9HC07 324 aa14.91□□□□□ -0.02
VPS36-207ENST00000611132 PLIN3O60664 434 aa14.91□□□□□ -0.02
VPS36-207ENST00000611132 CYP2C9P11712 490 aa14.91□□□□□ -0.02
VPS36-207ENST00000611132 DPYSQ14117 519 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms