RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 ARHGEF18Q6ZSZ5 1173 aa18.71■□□□□ 0.59
SNAPC3-207ENST00000610884 IL1RAPL1Q9NZN1 696 aa18.71■□□□□ 0.59
SNAPC3-207ENST00000610884 URODP06132 367 aa18.71■□□□□ 0.58
SNAPC3-207ENST00000610884 ZFXP17010 805 aaPredicted RBP18.71■□□□□ 0.58
SNAPC3-207ENST00000610884 ERVFC1P60507 584 aa18.71■□□□□ 0.58
SNAPC3-207ENST00000610884 PAFAH1B3Q15102 231 aaKnown RBP18.71■□□□□ 0.58
SNAPC3-207ENST00000610884 TAF12Q16514 161 aa18.71■□□□□ 0.58
SNAPC3-207ENST00000610884 MS4A13Q5J8X5 152 aa18.71■□□□□ 0.58
SNAPC3-207ENST00000610884 CAND1Q86VP6 1230 aaKnown RBP18.71■□□□□ 0.58
SNAPC3-207ENST00000610884 CDKL3Q8IVW4 592 aaPredicted RBP18.71■□□□□ 0.58
SNAPC3-207ENST00000610884 BBOF1Q8ND07 529 aa18.71■□□□□ 0.58
SNAPC3-207ENST00000610884 CCHCR1Q8TD31 782 aa18.71■□□□□ 0.58
SNAPC3-207ENST00000610884 SLC39A8Q9C0K1 460 aa18.71■□□□□ 0.58
SNAPC3-207ENST00000610884 CLUHO75153 1309 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 HIDE1A8MVS5 230 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 RASGRF2O14827 1237 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 ZBTB24O43167 697 aaPredicted RBP18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 JCHAINP01591 159 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 CAV1Q03135 178 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 AUHQ13825 339 aaKnown RBP18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 TMEM240Q5SV17 173 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 TMC7Q7Z402 723 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 CCDC91Q7Z6B0 441 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 PSTKQ8IV42 348 aaKnown RBP18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 SCML4Q8N228 414 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 PYROXD1Q8WU10 500 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 SERPINB12Q96P63 405 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 FRMD8P1Q9BZ68 369 aaPredicted RBP18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 KLC2Q9H0B6 622 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 CERS4Q9HA82 394 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 CD248Q9HCU0 757 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 RRN3Q9NYV6 651 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 IL37Q9NZH6 218 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 ACTL7AQ9Y615 435 aa18.7■□□□□ 0.58
SNAPC3-207ENST00000610884 CCDC78A2IDD5 438 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 ABLIM3O94929 683 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 NUDT17P0C025 328 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 DNAJB1P25685 340 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 FPGSQ05932 587 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 SF3A3Q12874 501 aaKnown RBP eCLIP18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 C3orf62Q6ZUJ4 267 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 CENPUQ71F23 418 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 OTOP3Q7RTS5 596 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 UNC5BQ8IZJ1 945 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 CFAP36Q96G28 342 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 SEC16BQ96JE7 1060 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 SERPINB11Q96P15 392 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 MRPL17Q9NRX2 175 aaKnown RBP18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 PAK5Q9P286 719 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 TLR6Q9Y2C9 796 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 YIPF1Q9Y548 306 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 COCHO43405 550 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 MLLT6P55198 1093 aaPredicted RBP18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 RPL10AP62906 217 aaKnown RBP18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 FBXL22Q6P050 247 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 TRMT10CQ7L0Y3 403 aaKnown RBP18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 SLC39A13Q96H72 371 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 TRPC7Q9HCX4 862 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 SLC40A1Q9NP59 571 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 MLXIPLQ9NP71 852 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 KLC4Q9NSK0 619 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 KLHL8Q9P2G9 620 aaPredicted RBP18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 SHOC2Q9UQ13 582 aa18.69■□□□□ 0.58
SNAPC3-207ENST00000610884 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 FAM92AA1XBS5 289 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 PTPN3P26045 913 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 PDK1Q15118 436 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 PRKD1Q15139 912 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 NADSYN1Q6IA69 706 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 CES3Q6UWW8 571 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 DNAJB7Q7Z6W7 309 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 ZNF354CQ86Y25 554 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 FIBCD1Q8N539 461 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 GPATCH11Q8N954 259 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 C17orf80Q9BSJ5 609 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 ZNF334Q9HCZ1 680 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 RCOR3Q9P2K3 495 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 AFF4Q9UHB7 1163 aaKnown RBP18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 BACE2Q9Y5Z0 518 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 ZNF840PA6NDX5 716 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 TGM5O43548 720 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 RTN3O95197 1032 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 LAG3P18627 525 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 GARSP41250 739 aaKnown RBP18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 ALDH1A3P47895 512 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 ARL4CP56559 192 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 SESN2P58004 480 aaPredicted RBP18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 STXBP5Q5T5C0 1151 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 TXNDC8Q6A555 127 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 ZNF534Q76KX8 674 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 UBE2Q1Q7Z7E8 422 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 DDX53Q86TM3 631 aaKnown RBP18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 VSIG1Q86XK7 387 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 DENND1CQ8IV53 801 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 CACNA2D3Q8IZS8 1091 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 SPATA22Q8NHS9 363 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 SPATA17Q96L03 361 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 MAD1L1Q9Y6D9 718 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 LTBP2Q14767 1821 aa18.68■□□□□ 0.58
SNAPC3-207ENST00000610884 ALOX15BO15296 676 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms