RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TMTC1Q8IUR5 882 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 CHPFQ8IZ52 775 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 CCDC33Q8N5R6 958 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 NIPA2Q8N8Q9 360 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 TTC17Q96AE7 1141 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 GABRG3Q99928 467 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 ZYG11BQ9C0D3 744 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 SPTLC3Q9NUV7 552 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 ZSCAN32Q9NX65 697 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 FZD10Q9ULW2 581 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 PLA2G4CQ9UP65 541 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 FANCMQ8IYD8 2048 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 SRGAP2O75044 1071 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 CYLC1P35663 651 aaPredicted RBP26.53■■□□□ 1.84
TRIM28-204ENST00000594806 GGCXP38435 758 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 ENPP2Q13822 863 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 FSCBQ5H9T9 825 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 MANEALQ5VSG8 457 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 PSTKQ8IV42 348 aaKnown RBP26.53■■□□□ 1.84
TRIM28-204ENST00000594806 ATOH1Q92858 354 aaPredicted RBP26.53■■□□□ 1.84
TRIM28-204ENST00000594806 ARHGEF26Q96DR7 871 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 TRIM7Q9C029 511 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 POLMQ9NP87 494 aaPredicted RBP26.53■■□□□ 1.84
TRIM28-204ENST00000594806 C2orf42Q9NWW7 574 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 CTTNBP2NLQ9P2B4 639 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 EBF1Q9UH73 591 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 ANAPC7Q9UJX3 599 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 PCDHGA2Q9Y5H1 932 aa26.53■■□□□ 1.84
TRIM28-204ENST00000594806 SGK1O00141 431 aa26.52■■□□□ 1.84
TRIM28-204ENST00000594806 PRPSAP2O60256 369 aa26.52■■□□□ 1.84
TRIM28-204ENST00000594806 ADAM23O75077 832 aa26.52■■□□□ 1.84
TRIM28-204ENST00000594806 LCA5LO95447 670 aa26.52■■□□□ 1.84
TRIM28-204ENST00000594806 APBB3O95704 486 aa26.52■■□□□ 1.84
TRIM28-204ENST00000594806 DLDP09622 509 aaKnown RBP26.52■■□□□ 1.84
TRIM28-204ENST00000594806 HTR7P34969 479 aa26.52■■□□□ 1.84
TRIM28-204ENST00000594806 SULT2A1Q06520 285 aa26.52■■□□□ 1.84
TRIM28-204ENST00000594806 PLEKHG6Q3KR16 790 aa26.52■■□□□ 1.84
TRIM28-204ENST00000594806 ZNF564Q8TBZ8 553 aaPredicted RBP26.52■■□□□ 1.84
TRIM28-204ENST00000594806 LUC7LQ9NQ29 371 aaKnown RBP26.52■■□□□ 1.84
TRIM28-204ENST00000594806 SNX10Q9Y5X0 201 aa26.52■■□□□ 1.84
TRIM28-204ENST00000594806 ANTXRLA6NF34 631 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 ALDH1A2O94788 518 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 MIPP30301 263 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 FUT11Q495W5 492 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 ALFQ53S48 1182 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 PITRM1Q5JRX3 1037 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 C6orf118Q5T5N4 469 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 ERMARDQ5T6L9 678 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 CXorf57Q6NSI4 855 aaKnown RBP26.51■■□□□ 1.83
TRIM28-204ENST00000594806 TSSK4Q6SA08 328 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 ZNF783Q6ZMS7 281 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 CIR1Q86X95 450 aaPredicted RBP26.51■■□□□ 1.83
TRIM28-204ENST00000594806 ARFGAP1Q8N6T3 406 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 KDM1BQ8NB78 822 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 ZBTB44Q8NCP5 570 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 TSTD1Q8NFU3 115 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 TBC1D31Q96DN5 1066 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 EPAS1Q99814 870 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 PACSIN1Q9BY11 444 aa26.51■■□□□ 1.83
TRIM28-204ENST00000594806 LRCH4O75427 683 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 CNTN5O94779 1100 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 LRIG2O94898 1065 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 HOXB2P14652 356 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 IRAK1P51617 712 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 ZNF135P52742 658 aaPredicted RBP26.5■■□□□ 1.83
TRIM28-204ENST00000594806 ZNF234Q14588 700 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 SPA17Q15506 151 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 ARTNQ5T4W7 220 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 LONP2Q86WA8 852 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 RHOT2Q8IXI1 618 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 ATRIPQ8WXE1 791 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 DONSONQ9NYP3 566 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 INTS6Q9UL03 887 aaKnown RBP26.5■■□□□ 1.83
TRIM28-204ENST00000594806 USP18Q9UMW8 372 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 STON1Q9Y6Q2 735 aa26.5■■□□□ 1.83
TRIM28-204ENST00000594806 ZBTB24O43167 697 aaPredicted RBP26.49■■□□□ 1.83
TRIM28-204ENST00000594806 SRPRAP08240 638 aaKnown RBP26.49■■□□□ 1.83
TRIM28-204ENST00000594806 RHOQP17081 205 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 OR1E1P30953 314 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 CNR2P34972 360 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 CSKP41240 450 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 STARD3Q14849 445 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 BOLA3Q53S33 107 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 TMEM92Q6UXU6 159 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 WDR5BQ86VZ2 330 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 ACOX2Q99424 681 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 FEM1AQ9BSK4 669 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 SEMA4AQ9H3S1 761 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 MPP6Q9NZW5 540 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 RAPGEFL1Q9UHV5 662 aa26.49■■□□□ 1.83
TRIM28-204ENST00000594806 RHOCP08134 193 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 MAPKAPK2P49137 400 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 VASPP50552 380 aaPredicted RBP26.48■■□□□ 1.83
TRIM28-204ENST00000594806 ST8SIA6P61647 398 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 SEMA3BQ13214 749 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 TCEAL1Q15170 157 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 SERPINA13PQ6UXR4 307 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 RASSF3Q86WH2 238 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 HHIPQ96QV1 700 aa26.48■■□□□ 1.83
TRIM28-204ENST00000594806 ZDHHC4Q9NPG8 344 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms