RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 PRRG1O14668 218 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 ECI2O75521 394 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 ZSCAN5DPP0CG00 497 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 ETS1P14921 441 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 ZNF135P52742 658 aaPredicted RBP18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 GDF10P55107 478 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 SMARCB1Q12824 385 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 MORF4L2Q15014 288 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 P3H1Q32P28 736 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 SLC39A12Q504Y0 691 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 RNASEH2BQ5TBB1 312 aaKnown RBP18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 BSPRYQ5W0U4 402 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 NPNTQ6UXI9 565 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 CEP128Q6ZU80 1094 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 PRUNE1Q86TP1 453 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 ZCCHC9Q8N567 271 aaKnown RBP18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 ARL8AQ96BM9 186 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 RUFY1Q96T51 708 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 MAGEB5Q9BZ81 275 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 SEMA4AQ9H3S1 761 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 TMBIM4Q9HC24 238 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 SHOC2Q9UQ13 582 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 F5P12259 2224 aa18.38■□□□□ 0.53
EIF4A1-216ENST00000580888 COL4A2P08572 1712 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 SGK1O00141 431 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 SMAPO00193 183 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 CAPN9O14815 690 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 OR4Q2P0C623 313 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 RPL22P35268 128 aaKnown RBP18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 CHKAP35790 457 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 SLC5A3P53794 718 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 EPHA5P54756 1037 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 ARPP19P56211 112 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 ZNF844Q08AG5 666 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 TTMPQ5BVD1 217 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 POTEHQ6S545 545 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 PCGF5Q86SE9 256 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 UBLCP1Q8WVY7 318 aaPredicted RBP18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 COMMD8Q9NX08 183 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 DLGAP2Q9P1A6 1054 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 PCDHB5Q9Y5E4 795 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 CFAP54Q96N23 3096 aa18.37■□□□□ 0.53
EIF4A1-216ENST00000580888 I6L893 689 aaPredicted RBP18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 ZNF197O14709 1029 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 TRIM66O15016 1216 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 RIPK2O43353 540 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 GFRA3O60609 400 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 NCAM1P13591 858 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 GRIK1P39086 918 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 PFKPQ01813 784 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 SLC10A2Q12908 348 aaPredicted RBP18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 GPS1Q13098 491 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 GPR17Q13304 367 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 DPYSQ14117 519 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 PAFAH1B3Q15102 231 aaKnown RBP18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 NCBP2-AS2Q69YL0 99 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 SCD5Q86SK9 330 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 HOOK3Q86VS8 718 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 PYROXD2Q8N2H3 581 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 LEMD2Q8NC56 503 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 ST13P5Q8NFI4 369 aaPredicted RBP18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 SCAMP5Q8TAC9 235 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 C2orf15Q8WU43 125 aaKnown RBP18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 SHDQ96IW2 340 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 OLFM3Q96PB7 478 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 ANLNQ9NQW6 1124 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 ABCC13Q9NSE7 274 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 SCML2Q9UQR0 700 aa18.36■□□□□ 0.53
EIF4A1-216ENST00000580888 DENND4CQ5VZ89 1909 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 NUP210Q8TEM1 1887 aaPredicted RBP18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 H3BRJ5 948 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 POLR3GO15318 223 aaPredicted RBP18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 VNN2O95498 520 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 GOT1P17174 413 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 CEBPBP17676 345 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 ARL4AP40617 200 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 VPS41P49754 854 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 CDR1P51861 262 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 PRKCQQ04759 706 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 ANGPT1Q15389 498 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 PPP6R3Q5H9R7 873 aaPredicted RBP18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 EFHC2Q5JST6 749 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 AGBL2Q5U5Z8 902 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 C1orf228Q6PIY5 440 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 RNF19BQ6ZMZ0 732 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 NUP93Q8N1F7 819 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 NAT8LQ8N9F0 302 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 SPPL2BQ8TCT7 592 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 DQX1Q8TE96 717 aaKnown RBP18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 RNF139Q8WU17 664 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 ING5Q8WYH8 240 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 PRCCQ92733 491 aaPredicted RBP18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 ELSPBP1Q96BH3 223 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 KXD1Q9BQD3 176 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 CORO1BQ9BR76 489 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 CDC42EP4Q9H3Q1 356 aaKnown RBP18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 ARHGEF4Q9NR80 690 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 PSD3Q9NYI0 1048 aa18.35■□□□□ 0.53
EIF4A1-216ENST00000580888 SIT1Q9Y3P8 196 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms